RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
RUNX2-201ENST00000359524 DCAF8L2P0C7V8 631 aa28.1■■■□□ 2.09
RUNX2-201ENST00000359524 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
RUNX2-201ENST00000359524 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
RUNX2-201ENST00000359524 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
RUNX2-201ENST00000359524 APLP2Q06481 763 aa26.43■■□□□ 1.82
RUNX2-201ENST00000359524 FAM9AQ8IZU1 332 aaPredicted RBP26.34■■□□□ 1.81
RUNX2-201ENST00000359524 CCER1Q8TC90 406 aaPredicted RBP26.11■■□□□ 1.77
RUNX2-201ENST00000359524 ERICH6Q7L0X2 663 aa25.87■■□□□ 1.73
RUNX2-201ENST00000359524 CENPBP07199 599 aaPredicted RBP25.86■■□□□ 1.73
RUNX2-201ENST00000359524 ZEB1P37275 1124 aaPredicted RBP25.86■■□□□ 1.73
RUNX2-201ENST00000359524 MYT1Q01538 1121 aa25.75■■□□□ 1.71
RUNX2-201ENST00000359524 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
RUNX2-201ENST00000359524 NEFLP07196 543 aa25.37■■□□□ 1.65
RUNX2-201ENST00000359524 PCGF6Q9BYE7 350 aa25.27■■□□□ 1.64
RUNX2-201ENST00000359524 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
RUNX2-201ENST00000359524 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.58
RUNX2-201ENST00000359524 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
RUNX2-201ENST00000359524 UBTFP17480 764 aaKnown RBP24.87■■□□□ 1.57
RUNX2-201ENST00000359524 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
RUNX2-201ENST00000359524 DAXXQ9UER7 740 aaPredicted RBP24.78■■□□□ 1.56
RUNX2-201ENST00000359524 ABCC9O60706 1549 aa24.76■■□□□ 1.55
RUNX2-201ENST00000359524 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
RUNX2-201ENST00000359524 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
RUNX2-201ENST00000359524 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
RUNX2-201ENST00000359524 TRIM26Q12899 539 aaPredicted RBP24.51■■□□□ 1.51
RUNX2-201ENST00000359524 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
RUNX2-201ENST00000359524 RTL5Q5HYW3 569 aaPredicted RBP24.17■■□□□ 1.46
RUNX2-201ENST00000359524 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
RUNX2-201ENST00000359524 MYT1LQ9UL68 1186 aa24.15■■□□□ 1.46
RUNX2-201ENST00000359524 HRCP23327 699 aa24.13■■□□□ 1.45
RUNX2-201ENST00000359524 LOC105371045A0A1W2PR82 267 aa24.11■■□□□ 1.45
RUNX2-201ENST00000359524 ZNF316A6NFI3 1004 aaPredicted RBP24.1■■□□□ 1.45
RUNX2-201ENST00000359524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
RUNX2-201ENST00000359524 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
RUNX2-201ENST00000359524 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
RUNX2-201ENST00000359524 POLR3GLQ9BT43 218 aa24.03■■□□□ 1.44
RUNX2-201ENST00000359524 CLSPNQ9HAW4 1339 aa23.94■■□□□ 1.42
RUNX2-201ENST00000359524 ITGAEP38570 1179 aa23.89■■□□□ 1.42
RUNX2-201ENST00000359524 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
RUNX2-201ENST00000359524 SLC4A1APQ9BWU0 796 aaKnown RBP23.72■■□□□ 1.39
RUNX2-201ENST00000359524 ZBTB47Q9UFB7 747 aaPredicted RBP23.72■■□□□ 1.39
RUNX2-201ENST00000359524 DIEXFQ68CQ4 756 aaKnown RBP23.68■■□□□ 1.38
RUNX2-201ENST00000359524 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
RUNX2-201ENST00000359524 NACADO15069 1562 aa23.57■■□□□ 1.36
RUNX2-201ENST00000359524 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
RUNX2-201ENST00000359524 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
RUNX2-201ENST00000359524 ANP32CO43423 234 aa23.52■■□□□ 1.36
RUNX2-201ENST00000359524 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
RUNX2-201ENST00000359524 FAM50AQ14320 339 aaKnown RBP23.46■■□□□ 1.35
RUNX2-201ENST00000359524 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
RUNX2-201ENST00000359524 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
RUNX2-201ENST00000359524 NEFMP07197 916 aa23.43■■□□□ 1.34
RUNX2-201ENST00000359524 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
RUNX2-201ENST00000359524 ANP32AP39687 249 aaKnown RBP23.25■■□□□ 1.31
RUNX2-201ENST00000359524 ANP32BQ92688 251 aaKnown RBP23.2■■□□□ 1.31
RUNX2-201ENST00000359524 NEUROD1Q13562 356 aa23.2■■□□□ 1.3
RUNX2-201ENST00000359524 CSRNP3Q8WYN3 585 aa23.16■■□□□ 1.3
RUNX2-201ENST00000359524 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.3
RUNX2-201ENST00000359524 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
RUNX2-201ENST00000359524 GTF3C3Q9Y5Q9 886 aa23.11■■□□□ 1.29
RUNX2-201ENST00000359524 ZNF326Q5BKZ1 582 aaKnown RBP23.05■■□□□ 1.28
RUNX2-201ENST00000359524 BCANQ96GW7 911 aa23.02■■□□□ 1.28
RUNX2-201ENST00000359524 UPF2Q9HAU5 1272 aaKnown RBP23.01■■□□□ 1.27
RUNX2-201ENST00000359524 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
RUNX2-201ENST00000359524 GLIPR1L2Q4G1C9 344 aa22.98■■□□□ 1.27
RUNX2-201ENST00000359524 SLC24A1O60721 1099 aa22.91■■□□□ 1.26
RUNX2-201ENST00000359524 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
RUNX2-201ENST00000359524 ACIN1Q9UKV3 1341 aaKnown RBP22.89■■□□□ 1.25
RUNX2-201ENST00000359524 HSP90AA1P07900 732 aaKnown RBP22.86■■□□□ 1.25
RUNX2-201ENST00000359524 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.82■■□□□ 1.24
RUNX2-201ENST00000359524 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
RUNX2-201ENST00000359524 ESF1Q9H501 851 aaKnown RBP22.75■■□□□ 1.23
RUNX2-201ENST00000359524 TONSLQ96HA7 1378 aa22.74■■□□□ 1.23
RUNX2-201ENST00000359524 FBLN2P98095 1184 aa22.7■■□□□ 1.22
RUNX2-201ENST00000359524 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
RUNX2-201ENST00000359524 NPM2Q86SE8 214 aaKnown RBP22.66■■□□□ 1.22
RUNX2-201ENST00000359524 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
RUNX2-201ENST00000359524 ANP32EQ9BTT0 268 aa22.64■■□□□ 1.21
RUNX2-201ENST00000359524 WIZO95785 1651 aa22.63■■□□□ 1.21
RUNX2-201ENST00000359524 EIF5BO60841 1220 aaKnown RBP22.61■■□□□ 1.21
RUNX2-201ENST00000359524 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
RUNX2-201ENST00000359524 BCL11AQ9H165 835 aa22.59■■□□□ 1.21
RUNX2-201ENST00000359524 EEA1Q15075 1411 aa22.59■■□□□ 1.21
RUNX2-201ENST00000359524 FKBP8Q14318 412 aa22.56■■□□□ 1.2
RUNX2-201ENST00000359524 STAG3Q9UJ98 1225 aa22.56■■□□□ 1.2
RUNX2-201ENST00000359524 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
RUNX2-201ENST00000359524 CDK11BP21127 795 aaKnown RBP22.53■■□□□ 1.2
RUNX2-201ENST00000359524 HNRNPUQ00839 825 aaKnown RBP eCLIP22.53■■□□□ 1.2
RUNX2-201ENST00000359524 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
RUNX2-201ENST00000359524 MYH16Q9H6N6 1097 aa22.49■■□□□ 1.19
RUNX2-201ENST00000359524 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
RUNX2-201ENST00000359524 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
RUNX2-201ENST00000359524 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
RUNX2-201ENST00000359524 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
RUNX2-201ENST00000359524 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
RUNX2-201ENST00000359524 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
RUNX2-201ENST00000359524 DDRGK1Q96HY6 314 aa22.46■■□□□ 1.19
RUNX2-201ENST00000359524 CLIP1P30622 1438 aa22.45■■□□□ 1.18
RUNX2-201ENST00000359524 BECN1Q14457 450 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms