RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
KCNIP4-201ENST00000359001 CTTNBP2Q8WZ74 1663 aa10.58□□□□□ -0.72
KCNIP4-201ENST00000359001 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
KCNIP4-201ENST00000359001 ABCA5Q8WWZ7 1642 aa10.57□□□□□ -0.72
KCNIP4-201ENST00000359001 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
KCNIP4-201ENST00000359001 DIEXFQ68CQ4 756 aaKnown RBP10.56□□□□□ -0.72
KCNIP4-201ENST00000359001 EFCAB5A4FU69 1503 aa10.56□□□□□ -0.72
KCNIP4-201ENST00000359001 DHX57Q6P158 1386 aaKnown RBP10.55□□□□□ -0.72
KCNIP4-201ENST00000359001 CLSPNQ9HAW4 1339 aa10.55□□□□□ -0.72
KCNIP4-201ENST00000359001 CCNB3Q8WWL7 1395 aa10.55□□□□□ -0.72
KCNIP4-201ENST00000359001 FHAD1B1AJZ9 1412 aa10.54□□□□□ -0.72
KCNIP4-201ENST00000359001 LRRC9Q6ZRR7 1453 aa10.53□□□□□ -0.72
KCNIP4-201ENST00000359001 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
KCNIP4-201ENST00000359001 KIF21AQ7Z4S6 1674 aa10.52□□□□□ -0.73
KCNIP4-201ENST00000359001 AQRO60306 1485 aaKnown RBP eCLIP10.51□□□□□ -0.73
KCNIP4-201ENST00000359001 FYCO1Q9BQS8 1478 aa10.5□□□□□ -0.73
KCNIP4-201ENST00000359001 SAMD9Q5K651 1589 aa10.49□□□□□ -0.73
KCNIP4-201ENST00000359001 FHOD3Q2V2M9 1422 aa10.48□□□□□ -0.73
KCNIP4-201ENST00000359001 PDS5BQ9NTI5 1447 aa10.48□□□□□ -0.73
KCNIP4-201ENST00000359001 TARBP1Q13395 1621 aaKnown RBP10.48□□□□□ -0.73
KCNIP4-201ENST00000359001 CASKIN1Q8WXD9 1431 aa10.48□□□□□ -0.73
KCNIP4-201ENST00000359001 SCAF1Q9H7N4 1312 aaKnown RBP10.48□□□□□ -0.73
KCNIP4-201ENST00000359001 SNAPC4Q5SXM2 1469 aa10.46□□□□□ -0.73
KCNIP4-201ENST00000359001 PHLDB1Q86UU1 1377 aa10.46□□□□□ -0.73
KCNIP4-201ENST00000359001 GAPVD1Q14C86 1478 aa10.46□□□□□ -0.74
KCNIP4-201ENST00000359001 LRRIQ1Q96JM4 1722 aa10.45□□□□□ -0.74
KCNIP4-201ENST00000359001 DNAJC5BQ9UF47 199 aa10.43□□□□□ -0.74
KCNIP4-201ENST00000359001 ACIN1Q9UKV3 1341 aaKnown RBP10.43□□□□□ -0.74
KCNIP4-201ENST00000359001 MAPKBP1O60336 1514 aa10.43□□□□□ -0.74
KCNIP4-201ENST00000359001 PBRM1Q86U86 1689 aa10.43□□□□□ -0.74
KCNIP4-201ENST00000359001 FMN1Q68DA7 1419 aa10.43□□□□□ -0.74
KCNIP4-201ENST00000359001 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
KCNIP4-201ENST00000359001 THOC2Q8NI27 1593 aaKnown RBP10.42□□□□□ -0.74
KCNIP4-201ENST00000359001 RAB3GAP2Q9H2M9 1393 aa10.41□□□□□ -0.74
KCNIP4-201ENST00000359001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.41□□□□□ -0.74
KCNIP4-201ENST00000359001 NEUROD1Q13562 356 aa10.41□□□□□ -0.74
KCNIP4-201ENST00000359001 GRIN2BQ13224 1484 aa10.4□□□□□ -0.74
KCNIP4-201ENST00000359001 SETD5Q9C0A6 1442 aa10.4□□□□□ -0.75
KCNIP4-201ENST00000359001 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
KCNIP4-201ENST00000359001 ADAMTS12P58397 1594 aa10.39□□□□□ -0.75
KCNIP4-201ENST00000359001 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
KCNIP4-201ENST00000359001 CENPBP07199 599 aaPredicted RBP10.36□□□□□ -0.75
KCNIP4-201ENST00000359001 FGD6Q6ZV73 1430 aa10.35□□□□□ -0.75
KCNIP4-201ENST00000359001 ITGAEP38570 1179 aa10.35□□□□□ -0.75
KCNIP4-201ENST00000359001 ARHGEF11O15085 1522 aa10.35□□□□□ -0.75
KCNIP4-201ENST00000359001 EHBP1L1Q8N3D4 1523 aa10.35□□□□□ -0.75
KCNIP4-201ENST00000359001 MIER1Q8N108 512 aa10.34□□□□□ -0.75
KCNIP4-201ENST00000359001 SUPT6HQ7KZ85 1726 aaKnown RBP10.34□□□□□ -0.75
KCNIP4-201ENST00000359001 IQGAP2Q13576 1575 aa10.34□□□□□ -0.75
KCNIP4-201ENST00000359001 WDR62O43379 1518 aa10.33□□□□□ -0.76
KCNIP4-201ENST00000359001 NCOA2Q15596 1464 aa10.32□□□□□ -0.76
KCNIP4-201ENST00000359001 MAGI3Q5TCQ9 1506 aa10.32□□□□□ -0.76
KCNIP4-201ENST00000359001 UGGT2Q9NYU1 1516 aa10.32□□□□□ -0.76
KCNIP4-201ENST00000359001 HECW1Q76N89 1606 aa10.31□□□□□ -0.76
KCNIP4-201ENST00000359001 CCDC18Q5T9S5 1454 aa10.31□□□□□ -0.76
KCNIP4-201ENST00000359001 FAM50AQ14320 339 aaKnown RBP10.31□□□□□ -0.76
KCNIP4-201ENST00000359001 MYOM3Q5VTT5 1437 aa10.3□□□□□ -0.76
KCNIP4-201ENST00000359001 MTUS2Q5JR59 1369 aa10.3□□□□□ -0.76
KCNIP4-201ENST00000359001 IFT140Q96RY7 1462 aa10.3□□□□□ -0.76
KCNIP4-201ENST00000359001 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
KCNIP4-201ENST00000359001 PTPN23Q9H3S7 1636 aa10.29□□□□□ -0.76
KCNIP4-201ENST00000359001 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
KCNIP4-201ENST00000359001 HFM1A2PYH4 1435 aa10.29□□□□□ -0.76
KCNIP4-201ENST00000359001 ZNF608Q9ULD9 1512 aaPredicted RBP10.27□□□□□ -0.76
KCNIP4-201ENST00000359001 TCOF1Q13428 1488 aaKnown RBP10.27□□□□□ -0.77
KCNIP4-201ENST00000359001 GTF3C3Q9Y5Q9 886 aa10.26□□□□□ -0.77
KCNIP4-201ENST00000359001 EPRSP07814 1512 aaKnown RBP10.26□□□□□ -0.77
KCNIP4-201ENST00000359001 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
KCNIP4-201ENST00000359001 GCC2Q8IWJ2 1684 aa10.25□□□□□ -0.77
KCNIP4-201ENST00000359001 KIAA0556O60303 1618 aa10.25□□□□□ -0.77
KCNIP4-201ENST00000359001 NAIPQ13075 1403 aa10.24□□□□□ -0.77
KCNIP4-201ENST00000359001 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
KCNIP4-201ENST00000359001 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
KCNIP4-201ENST00000359001 CDK13Q14004 1512 aaKnown RBP10.23□□□□□ -0.77
KCNIP4-201ENST00000359001 DISP1Q96F81 1524 aa10.23□□□□□ -0.77
KCNIP4-201ENST00000359001 KIAA0586Q9BVV6 1533 aa10.23□□□□□ -0.77
KCNIP4-201ENST00000359001 AKNAQ7Z591 1439 aa10.22□□□□□ -0.77
KCNIP4-201ENST00000359001 SIN3AQ96ST3 1273 aa10.22□□□□□ -0.77
KCNIP4-201ENST00000359001 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
KCNIP4-201ENST00000359001 YTHDC1Q96MU7 727 aaKnown RBP10.21□□□□□ -0.77
KCNIP4-201ENST00000359001 MIA2Q96PC5 1412 aa10.2□□□□□ -0.78
KCNIP4-201ENST00000359001 RAPGEF6Q8TEU7 1601 aa10.19□□□□□ -0.78
KCNIP4-201ENST00000359001 MAGI1Q96QZ7 1491 aaPredicted RBP10.19□□□□□ -0.78
KCNIP4-201ENST00000359001 KDM5BQ9UGL1 1544 aa10.18□□□□□ -0.78
KCNIP4-201ENST00000359001 NUP153P49790 1475 aaKnown RBP10.18□□□□□ -0.78
KCNIP4-201ENST00000359001 DENND4BO75064 1496 aaPredicted RBP10.17□□□□□ -0.78
KCNIP4-201ENST00000359001 KDM6BO15054 1643 aa10.16□□□□□ -0.78
KCNIP4-201ENST00000359001 PPP1R15AO75807 674 aaPredicted RBP10.16□□□□□ -0.78
KCNIP4-201ENST00000359001 CEP170Q5SW79 1584 aa10.16□□□□□ -0.78
KCNIP4-201ENST00000359001 DNMT1P26358 1616 aaKnown RBP10.15□□□□□ -0.78
KCNIP4-201ENST00000359001 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.79
KCNIP4-201ENST00000359001 SYNJ2O15056 1496 aa10.14□□□□□ -0.79
KCNIP4-201ENST00000359001 ADCY10Q96PN6 1610 aa10.14□□□□□ -0.79
KCNIP4-201ENST00000359001 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
KCNIP4-201ENST00000359001 NUP160Q12769 1436 aa10.13□□□□□ -0.79
KCNIP4-201ENST00000359001 TONSLQ96HA7 1378 aa10.12□□□□□ -0.79
KCNIP4-201ENST00000359001 DAPK1P53355 1430 aa10.11□□□□□ -0.79
KCNIP4-201ENST00000359001 ROCK1Q13464 1354 aa10.11□□□□□ -0.79
KCNIP4-201ENST00000359001 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
KCNIP4-201ENST00000359001 ABCC5O15440 1437 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms