RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 NISCHQ9Y2I1 1504 aa15.13■□□□□ 0.01
KCNIP4-201ENST00000359001 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
KCNIP4-201ENST00000359001 AEBP2Q6ZN18 517 aaPredicted RBP13.34□□□□□ -0.27
KCNIP4-201ENST00000359001 CCDC180Q9P1Z9 1646 aa13.02□□□□□ -0.33
KCNIP4-201ENST00000359001 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
KCNIP4-201ENST00000359001 CHIC1Q5VXU3 224 aa12.73□□□□□ -0.37
KCNIP4-201ENST00000359001 SHROOM4Q9ULL8 1493 aa12.61□□□□□ -0.39
KCNIP4-201ENST00000359001 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
KCNIP4-201ENST00000359001 SUPT5HO00267 1087 aaKnown RBP12.29□□□□□ -0.44
KCNIP4-201ENST00000359001 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
KCNIP4-201ENST00000359001 MYO15BQ96JP2 1530 aa12.2□□□□□ -0.46
KCNIP4-201ENST00000359001 ABCC9O60706 1549 aa12.09□□□□□ -0.47
KCNIP4-201ENST00000359001 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
KCNIP4-201ENST00000359001 NACADO15069 1562 aa12□□□□□ -0.49
KCNIP4-201ENST00000359001 SENP3Q9H4L4 574 aaPredicted RBP11.96□□□□□ -0.5
KCNIP4-201ENST00000359001 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
KCNIP4-201ENST00000359001 RB1CC1Q8TDY2 1594 aa11.8□□□□□ -0.52
KCNIP4-201ENST00000359001 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
KCNIP4-201ENST00000359001 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
KCNIP4-201ENST00000359001 WIZO95785 1651 aa11.67□□□□□ -0.54
KCNIP4-201ENST00000359001 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
KCNIP4-201ENST00000359001 BAZ1AQ9NRL2 1556 aaPredicted RBP11.65□□□□□ -0.54
KCNIP4-201ENST00000359001 EIF4G1Q04637 1599 aaKnown RBP11.59□□□□□ -0.55
KCNIP4-201ENST00000359001 LOC105371045A0A1W2PR82 267 aa11.57□□□□□ -0.56
KCNIP4-201ENST00000359001 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
KCNIP4-201ENST00000359001 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
KCNIP4-201ENST00000359001 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
KCNIP4-201ENST00000359001 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
KCNIP4-201ENST00000359001 HRCP23327 699 aa11.48□□□□□ -0.57
KCNIP4-201ENST00000359001 SMARCA2P51531 1590 aa11.46□□□□□ -0.58
KCNIP4-201ENST00000359001 PCGF6Q9BYE7 350 aa11.45□□□□□ -0.58
KCNIP4-201ENST00000359001 MSH5O43196 834 aa11.43□□□□□ -0.58
KCNIP4-201ENST00000359001 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
KCNIP4-201ENST00000359001 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
KCNIP4-201ENST00000359001 PHF23Q9BUL5 403 aaPredicted RBP11.38□□□□□ -0.59
KCNIP4-201ENST00000359001 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
KCNIP4-201ENST00000359001 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
KCNIP4-201ENST00000359001 FAM9AQ8IZU1 332 aaPredicted RBP11.33□□□□□ -0.6
KCNIP4-201ENST00000359001 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
KCNIP4-201ENST00000359001 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
KCNIP4-201ENST00000359001 EEA1Q15075 1411 aa11.2□□□□□ -0.62
KCNIP4-201ENST00000359001 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
KCNIP4-201ENST00000359001 SOGA1O94964 1423 aa11.18□□□□□ -0.62
KCNIP4-201ENST00000359001 FOXD1Q16676 465 aa11.17□□□□□ -0.62
KCNIP4-201ENST00000359001 PPARGC1BQ86YN6 1023 aaKnown RBP11.17□□□□□ -0.62
KCNIP4-201ENST00000359001 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
KCNIP4-201ENST00000359001 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
KCNIP4-201ENST00000359001 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
KCNIP4-201ENST00000359001 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
KCNIP4-201ENST00000359001 TNIKQ9UKE5 1360 aa11.12□□□□□ -0.63
KCNIP4-201ENST00000359001 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
KCNIP4-201ENST00000359001 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
KCNIP4-201ENST00000359001 KIF21BO75037 1637 aa11.09□□□□□ -0.63
KCNIP4-201ENST00000359001 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
KCNIP4-201ENST00000359001 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
KCNIP4-201ENST00000359001 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
KCNIP4-201ENST00000359001 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
KCNIP4-201ENST00000359001 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
KCNIP4-201ENST00000359001 ZEB1P37275 1124 aaPredicted RBP11.06□□□□□ -0.64
KCNIP4-201ENST00000359001 CEP164Q9UPV0 1460 aa11.03□□□□□ -0.64
KCNIP4-201ENST00000359001 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
KCNIP4-201ENST00000359001 CFTRP13569 1480 aa10.95□□□□□ -0.66
KCNIP4-201ENST00000359001 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
KCNIP4-201ENST00000359001 CUX1P39880 1505 aa10.94□□□□□ -0.66
KCNIP4-201ENST00000359001 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
KCNIP4-201ENST00000359001 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
KCNIP4-201ENST00000359001 CLIP1P30622 1438 aa10.91□□□□□ -0.66
KCNIP4-201ENST00000359001 PRXQ9BXM0 1461 aa10.9□□□□□ -0.66
KCNIP4-201ENST00000359001 VPS8Q8N3P4 1428 aa10.89□□□□□ -0.67
KCNIP4-201ENST00000359001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
KCNIP4-201ENST00000359001 KIF27Q86VH2 1401 aa10.82□□□□□ -0.68
KCNIP4-201ENST00000359001 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
KCNIP4-201ENST00000359001 ARAP1Q96P48 1450 aa10.8□□□□□ -0.68
KCNIP4-201ENST00000359001 CCER1Q8TC90 406 aaPredicted RBP10.8□□□□□ -0.68
KCNIP4-201ENST00000359001 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
KCNIP4-201ENST00000359001 CADPSQ9ULU8 1353 aa10.8□□□□□ -0.68
KCNIP4-201ENST00000359001 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
KCNIP4-201ENST00000359001 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
KCNIP4-201ENST00000359001 CUX2O14529 1486 aa10.72□□□□□ -0.69
KCNIP4-201ENST00000359001 ARHGAP35Q9NRY4 1499 aa10.72□□□□□ -0.69
KCNIP4-201ENST00000359001 IGF1RP08069 1367 aa10.7□□□□□ -0.7
KCNIP4-201ENST00000359001 POTEHQ6S545 545 aa10.7□□□□□ -0.7
KCNIP4-201ENST00000359001 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
KCNIP4-201ENST00000359001 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
KCNIP4-201ENST00000359001 APLP2Q06481 763 aa10.67□□□□□ -0.7
KCNIP4-201ENST00000359001 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.7
KCNIP4-201ENST00000359001 ABCA10Q8WWZ4 1543 aa10.65□□□□□ -0.7
KCNIP4-201ENST00000359001 TOPBP1Q92547 1522 aa10.65□□□□□ -0.7
KCNIP4-201ENST00000359001 RRBP1Q9P2E9 1410 aaKnown RBP10.65□□□□□ -0.7
KCNIP4-201ENST00000359001 WDR97A6NE52 1622 aa10.64□□□□□ -0.71
KCNIP4-201ENST00000359001 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
KCNIP4-201ENST00000359001 MAP3K1Q13233 1512 aa10.64□□□□□ -0.71
KCNIP4-201ENST00000359001 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
KCNIP4-201ENST00000359001 LAMC3Q9Y6N6 1575 aa10.63□□□□□ -0.71
KCNIP4-201ENST00000359001 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
KCNIP4-201ENST00000359001 NESP48681 1621 aa10.62□□□□□ -0.71
KCNIP4-201ENST00000359001 KANK4Q5T7N3 995 aaPredicted RBP10.62□□□□□ -0.71
KCNIP4-201ENST00000359001 TIAM1Q13009 1591 aa10.61□□□□□ -0.71
KCNIP4-201ENST00000359001 CUL7Q14999 1698 aa10.61□□□□□ -0.71
KCNIP4-201ENST00000359001 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms