RNA–Protein interactions for RNA: ENST00000358356.9

RUNX1-203, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1, Length 2,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-203ENST00000358356 RAB3GAP2Q9H2M9 1393 aa24.73■■□□□ 1.55
RUNX1-203ENST00000358356 KCNH8Q96L42 1107 aa24.7■■□□□ 1.54
RUNX1-203ENST00000358356 FAM50AQ14320 339 aaKnown RBP24.68■■□□□ 1.54
RUNX1-203ENST00000358356 SUPT16HQ9Y5B9 1047 aaKnown RBP24.66■■□□□ 1.54
RUNX1-203ENST00000358356 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
RUNX1-203ENST00000358356 SIN3AQ96ST3 1273 aa24.63■■□□□ 1.53
RUNX1-203ENST00000358356 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
RUNX1-203ENST00000358356 MAPKBP1O60336 1514 aa24.56■■□□□ 1.52
RUNX1-203ENST00000358356 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
RUNX1-203ENST00000358356 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
RUNX1-203ENST00000358356 TIAM1Q13009 1591 aa24.55■■□□□ 1.52
RUNX1-203ENST00000358356 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
RUNX1-203ENST00000358356 DDX10Q13206 875 aaKnown RBP24.54■■□□□ 1.52
RUNX1-203ENST00000358356 HIRIP3Q9BW71 556 aaPredicted RBP24.53■■□□□ 1.52
RUNX1-203ENST00000358356 LRRC9Q6ZRR7 1453 aa24.53■■□□□ 1.52
RUNX1-203ENST00000358356 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
RUNX1-203ENST00000358356 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
RUNX1-203ENST00000358356 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
RUNX1-203ENST00000358356 FHOD3Q2V2M9 1422 aa24.43■■□□□ 1.5
RUNX1-203ENST00000358356 WDR97A6NE52 1622 aa24.42■■□□□ 1.5
RUNX1-203ENST00000358356 BCANQ96GW7 911 aa24.41■■□□□ 1.5
RUNX1-203ENST00000358356 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
RUNX1-203ENST00000358356 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
RUNX1-203ENST00000358356 ABCA10Q8WWZ4 1543 aa24.39■■□□□ 1.49
RUNX1-203ENST00000358356 PCF11O94913 1555 aaKnown RBP24.37■■□□□ 1.49
RUNX1-203ENST00000358356 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
RUNX1-203ENST00000358356 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
RUNX1-203ENST00000358356 TSHZ2Q9NRE2 1034 aa24.32■■□□□ 1.48
RUNX1-203ENST00000358356 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
RUNX1-203ENST00000358356 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
RUNX1-203ENST00000358356 FKBP8Q14318 412 aa24.27■■□□□ 1.48
RUNX1-203ENST00000358356 TRIM52Q96A61 297 aa24.26■■□□□ 1.47
RUNX1-203ENST00000358356 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
RUNX1-203ENST00000358356 GAPVD1Q14C86 1478 aa24.2■■□□□ 1.46
RUNX1-203ENST00000358356 CASKIN1Q8WXD9 1431 aa24.19■■□□□ 1.46
RUNX1-203ENST00000358356 TIMELESSQ9UNS1 1208 aa24.19■■□□□ 1.46
RUNX1-203ENST00000358356 FYCO1Q9BQS8 1478 aa24.18■■□□□ 1.46
RUNX1-203ENST00000358356 ANP32CO43423 234 aa24.18■■□□□ 1.46
RUNX1-203ENST00000358356 MTUS2Q5JR59 1369 aa24.17■■□□□ 1.46
RUNX1-203ENST00000358356 TONSLQ96HA7 1378 aa24.17■■□□□ 1.46
RUNX1-203ENST00000358356 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.461e-6■■■■□ 20.5
RUNX1-203ENST00000358356 FGD6Q6ZV73 1430 aa24.15■■□□□ 1.46
RUNX1-203ENST00000358356 PTPRKQ15262 1439 aa24.13■■□□□ 1.45
RUNX1-203ENST00000358356 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
RUNX1-203ENST00000358356 CUL7Q14999 1698 aa24.1■■□□□ 1.45
RUNX1-203ENST00000358356 CCDC18Q5T9S5 1454 aa24.09■■□□□ 1.45
RUNX1-203ENST00000358356 ARID3CA6NKF2 412 aa24.08■■□□□ 1.45
RUNX1-203ENST00000358356 EFCAB5A4FU69 1503 aa24.08■■□□□ 1.45
RUNX1-203ENST00000358356 FMN1Q68DA7 1419 aa24.08■■□□□ 1.45
RUNX1-203ENST00000358356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.08■■□□□ 1.44
RUNX1-203ENST00000358356 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
RUNX1-203ENST00000358356 CHIC2Q9UKJ5 165 aa24.06■■□□□ 1.44
RUNX1-203ENST00000358356 CCER2I3L3R5 266 aa24.05■■□□□ 1.44
RUNX1-203ENST00000358356 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
RUNX1-203ENST00000358356 NEFLP07196 543 aa24.05■■□□□ 1.44
RUNX1-203ENST00000358356 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
RUNX1-203ENST00000358356 SNAPC4Q5SXM2 1469 aa24.03■■□□□ 1.44
RUNX1-203ENST00000358356 HFM1A2PYH4 1435 aa24■■□□□ 1.43
RUNX1-203ENST00000358356 UACAQ9BZF9 1416 aa24■■□□□ 1.43
RUNX1-203ENST00000358356 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
RUNX1-203ENST00000358356 NCOA2Q15596 1464 aa23.98■■□□□ 1.43
RUNX1-203ENST00000358356 NAIPQ13075 1403 aa23.98■■□□□ 1.43
RUNX1-203ENST00000358356 MYOM3Q5VTT5 1437 aa23.95■■□□□ 1.42
RUNX1-203ENST00000358356 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
RUNX1-203ENST00000358356 PTPN23Q9H3S7 1636 aa23.94■■□□□ 1.42
RUNX1-203ENST00000358356 HNRNPUQ00839 825 aaKnown RBP eCLIP23.9■■□□□ 1.42
RUNX1-203ENST00000358356 LRRIQ1Q96JM4 1722 aa23.89■■□□□ 1.42
RUNX1-203ENST00000358356 ANP32EQ9BTT0 268 aa23.89■■□□□ 1.42
RUNX1-203ENST00000358356 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
RUNX1-203ENST00000358356 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
RUNX1-203ENST00000358356 HSPA5P11021 654 aaKnown RBP23.88■■□□□ 1.41
RUNX1-203ENST00000358356 FOXD1Q16676 465 aa23.88■■□□□ 1.41
RUNX1-203ENST00000358356 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
RUNX1-203ENST00000358356 SAMD9Q5K651 1589 aa23.85■■□□□ 1.41
RUNX1-203ENST00000358356 RBM19Q9Y4C8 960 aaKnown RBP23.84■■□□□ 1.41
RUNX1-203ENST00000358356 WASHC2AQ641Q2 1341 aa23.84■■□□□ 1.41
RUNX1-203ENST00000358356 FBLN2P98095 1184 aa23.82■■□□□ 1.4
RUNX1-203ENST00000358356 MAGI3Q5TCQ9 1506 aa23.82■■□□□ 1.4
RUNX1-203ENST00000358356 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
RUNX1-203ENST00000358356 KDM5BQ9UGL1 1544 aa23.8■■□□□ 1.4
RUNX1-203ENST00000358356 SUPT6HQ7KZ85 1726 aaKnown RBP23.78■■□□□ 1.4
RUNX1-203ENST00000358356 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
RUNX1-203ENST00000358356 CCDC184Q52MB2 194 aa23.77■■□□□ 1.4
RUNX1-203ENST00000358356 EHBP1L1Q8N3D4 1523 aa23.76■■□□□ 1.39
RUNX1-203ENST00000358356 MPHOSPH9Q99550 1183 aa23.76■■□□□ 1.39
RUNX1-203ENST00000358356 L3MBTL2Q969R5 705 aa23.76■■□□□ 1.39
RUNX1-203ENST00000358356 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.397e-7■■■■■ 39.1
RUNX1-203ENST00000358356 UGGT2Q9NYU1 1516 aa23.75■■□□□ 1.39
RUNX1-203ENST00000358356 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
RUNX1-203ENST00000358356 C11orf95C9JLR9 678 aaPredicted RBP23.73■■□□□ 1.39
RUNX1-203ENST00000358356 IQGAP2Q13576 1575 aa23.72■■□□□ 1.39
RUNX1-203ENST00000358356 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
RUNX1-203ENST00000358356 KDM6BO15054 1643 aa23.71■■□□□ 1.39
RUNX1-203ENST00000358356 WDR62O43379 1518 aa23.71■■□□□ 1.39
RUNX1-203ENST00000358356 CDK13Q14004 1512 aaKnown RBP23.71■■□□□ 1.39
RUNX1-203ENST00000358356 FAM9BQ8IZU0 186 aa23.68■■□□□ 1.38
RUNX1-203ENST00000358356 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
RUNX1-203ENST00000358356 CNGB1Q14028 1251 aaPredicted RBP23.66■■□□□ 1.38
RUNX1-203ENST00000358356 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
RUNX1-203ENST00000358356 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms