RNA–Protein interactions for RNA: ENST00000358356.9

RUNX1-203, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1, Length 2,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-203ENST00000358356 NISCHQ9Y2I1 1504 aa34.67■■■■□ 3.14
RUNX1-203ENST00000358356 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
RUNX1-203ENST00000358356 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
RUNX1-203ENST00000358356 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
RUNX1-203ENST00000358356 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
RUNX1-203ENST00000358356 ZCCHC6Q5VYS8 1495 aaKnown RBP29.21■■■□□ 2.27
RUNX1-203ENST00000358356 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
RUNX1-203ENST00000358356 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
RUNX1-203ENST00000358356 HRCP23327 699 aa28.29■■■□□ 2.12
RUNX1-203ENST00000358356 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
RUNX1-203ENST00000358356 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
RUNX1-203ENST00000358356 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
RUNX1-203ENST00000358356 ABCC9O60706 1549 aa28.08■■■□□ 2.08
RUNX1-203ENST00000358356 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
RUNX1-203ENST00000358356 SCRIBQ14160 1630 aa27.9■■■□□ 2.06
RUNX1-203ENST00000358356 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
RUNX1-203ENST00000358356 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
RUNX1-203ENST00000358356 FAM9AQ8IZU1 332 aaPredicted RBP27.44■■□□□ 1.98
RUNX1-203ENST00000358356 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
RUNX1-203ENST00000358356 NACADO15069 1562 aa27.4■■□□□ 1.98
RUNX1-203ENST00000358356 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
RUNX1-203ENST00000358356 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
RUNX1-203ENST00000358356 RB1CC1Q8TDY2 1594 aa27.23■■□□□ 1.95
RUNX1-203ENST00000358356 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
RUNX1-203ENST00000358356 WIZO95785 1651 aa26.92■■□□□ 1.9
RUNX1-203ENST00000358356 PABPN1Q86U42 306 aaKnown RBP eCLIP26.91■■□□□ 1.9
RUNX1-203ENST00000358356 ZEB1P37275 1124 aaPredicted RBP26.88■■□□□ 1.89
RUNX1-203ENST00000358356 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
RUNX1-203ENST00000358356 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
RUNX1-203ENST00000358356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.54■■□□□ 1.84
RUNX1-203ENST00000358356 TTBK1Q5TCY1 1321 aaPredicted RBP26.52■■□□□ 1.84
RUNX1-203ENST00000358356 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
RUNX1-203ENST00000358356 SMARCA4P51532 1647 aa26.49■■□□□ 1.83
RUNX1-203ENST00000358356 CCER1Q8TC90 406 aaPredicted RBP26.42■■□□□ 1.82
RUNX1-203ENST00000358356 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
RUNX1-203ENST00000358356 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.81
RUNX1-203ENST00000358356 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
RUNX1-203ENST00000358356 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
RUNX1-203ENST00000358356 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
RUNX1-203ENST00000358356 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
RUNX1-203ENST00000358356 SOGA1O94964 1423 aa26.22■■□□□ 1.79
RUNX1-203ENST00000358356 CEP162Q5TB80 1403 aa26.15■■□□□ 1.78
RUNX1-203ENST00000358356 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
RUNX1-203ENST00000358356 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
RUNX1-203ENST00000358356 CSRNP3Q8WYN3 585 aa26.08■■□□□ 1.77
RUNX1-203ENST00000358356 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
RUNX1-203ENST00000358356 TNIKQ9UKE5 1360 aa26.01■■□□□ 1.75
RUNX1-203ENST00000358356 DIEXFQ68CQ4 756 aaKnown RBP26.01■■□□□ 1.75
RUNX1-203ENST00000358356 NEUROD1Q13562 356 aa25.96■■□□□ 1.75
RUNX1-203ENST00000358356 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
RUNX1-203ENST00000358356 PELP1Q8IZL8 1130 aaKnown RBP25.94■■□□□ 1.74
RUNX1-203ENST00000358356 ACIN1Q9UKV3 1341 aaKnown RBP25.92■■□□□ 1.74
RUNX1-203ENST00000358356 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
RUNX1-203ENST00000358356 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
RUNX1-203ENST00000358356 EEA1Q15075 1411 aa25.83■■□□□ 1.73
RUNX1-203ENST00000358356 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
RUNX1-203ENST00000358356 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
RUNX1-203ENST00000358356 GOLGA3Q08378 1498 aa25.8■■□□□ 1.72
RUNX1-203ENST00000358356 GTF3C3Q9Y5Q9 886 aa25.73■■□□□ 1.71
RUNX1-203ENST00000358356 CENPBP07199 599 aaPredicted RBP25.69■■□□□ 1.7
RUNX1-203ENST00000358356 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
RUNX1-203ENST00000358356 SYNJ1O43426 1573 aa25.64■■□□□ 1.69
RUNX1-203ENST00000358356 CLIP1P30622 1438 aa25.62■■□□□ 1.69
RUNX1-203ENST00000358356 YTHDC1Q96MU7 727 aaKnown RBP25.61■■□□□ 1.69
RUNX1-203ENST00000358356 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
RUNX1-203ENST00000358356 APLP2Q06481 763 aa25.56■■□□□ 1.68
RUNX1-203ENST00000358356 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
RUNX1-203ENST00000358356 MIER1Q8N108 512 aa25.46■■□□□ 1.67
RUNX1-203ENST00000358356 VPS8Q8N3P4 1428 aa25.46■■□□□ 1.67
RUNX1-203ENST00000358356 KIF21BO75037 1637 aa25.45■■□□□ 1.66
RUNX1-203ENST00000358356 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
RUNX1-203ENST00000358356 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
RUNX1-203ENST00000358356 KANK4Q5T7N3 995 aaPredicted RBP25.24■■□□□ 1.63
RUNX1-203ENST00000358356 TOP2BQ02880 1626 aa25.22■■□□□ 1.63
RUNX1-203ENST00000358356 CUX1P39880 1505 aa25.18■■□□□ 1.62
RUNX1-203ENST00000358356 CFTRP13569 1480 aa25.15■■□□□ 1.62
RUNX1-203ENST00000358356 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.62
RUNX1-203ENST00000358356 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
RUNX1-203ENST00000358356 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
RUNX1-203ENST00000358356 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
RUNX1-203ENST00000358356 DHX57Q6P158 1386 aaKnown RBP25.09■■□□□ 1.61
RUNX1-203ENST00000358356 ITGAEP38570 1179 aa25.09■■□□□ 1.61
RUNX1-203ENST00000358356 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
RUNX1-203ENST00000358356 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
RUNX1-203ENST00000358356 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
RUNX1-203ENST00000358356 KIF27Q86VH2 1401 aa24.97■■□□□ 1.59
RUNX1-203ENST00000358356 CLSPNQ9HAW4 1339 aa24.94■■□□□ 1.58
RUNX1-203ENST00000358356 NESP48681 1621 aa24.92■■□□□ 1.58
RUNX1-203ENST00000358356 CCNB3Q8WWL7 1395 aa24.86■■□□□ 1.57
RUNX1-203ENST00000358356 RRBP1Q9P2E9 1410 aaKnown RBP24.86■■□□□ 1.57
RUNX1-203ENST00000358356 ARHGAP35Q9NRY4 1499 aa24.86■■□□□ 1.57
RUNX1-203ENST00000358356 CUX2O14529 1486 aa24.85■■□□□ 1.57
RUNX1-203ENST00000358356 MYT1Q01538 1121 aa24.81■■□□□ 1.56
RUNX1-203ENST00000358356 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
RUNX1-203ENST00000358356 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
RUNX1-203ENST00000358356 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
RUNX1-203ENST00000358356 IGF1RP08069 1367 aa24.76■■□□□ 1.55
RUNX1-203ENST00000358356 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
RUNX1-203ENST00000358356 ATP1B4Q9UN42 357 aaPredicted RBP24.73■■□□□ 1.55
RUNX1-203ENST00000358356 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms