RNA–Protein interactions for RNA: ENST00000356541.4

ABLIM3-203, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 1 (best) BASIC

Gene ABLIM3, Length 2,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-203ENST00000356541 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
ABLIM3-203ENST00000356541 EFCAB5A4FU69 1503 aa19.4■□□□□ 0.7
ABLIM3-203ENST00000356541 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
ABLIM3-203ENST00000356541 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
ABLIM3-203ENST00000356541 PCF11O94913 1555 aaKnown RBP19.37■□□□□ 0.69
ABLIM3-203ENST00000356541 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
ABLIM3-203ENST00000356541 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
ABLIM3-203ENST00000356541 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
ABLIM3-203ENST00000356541 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.68
ABLIM3-203ENST00000356541 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
ABLIM3-203ENST00000356541 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.68
ABLIM3-203ENST00000356541 FHOD3Q2V2M9 1422 aa19.31■□□□□ 0.68
ABLIM3-203ENST00000356541 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
ABLIM3-203ENST00000356541 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
ABLIM3-203ENST00000356541 P3H3Q8IVL6 736 aa19.29■□□□□ 0.68
ABLIM3-203ENST00000356541 PHLDB1Q86UU1 1377 aa19.28■□□□□ 0.68
ABLIM3-203ENST00000356541 ITGAEP38570 1179 aa19.28■□□□□ 0.68
ABLIM3-203ENST00000356541 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
ABLIM3-203ENST00000356541 GAPVD1Q14C86 1478 aa19.24■□□□□ 0.67
ABLIM3-203ENST00000356541 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
ABLIM3-203ENST00000356541 MIER1Q8N108 512 aa19.23■□□□□ 0.67
ABLIM3-203ENST00000356541 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
ABLIM3-203ENST00000356541 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
ABLIM3-203ENST00000356541 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
ABLIM3-203ENST00000356541 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
ABLIM3-203ENST00000356541 SAMD9Q5K651 1589 aa19.2■□□□□ 0.66
ABLIM3-203ENST00000356541 FAM50AQ14320 339 aaKnown RBP19.18■□□□□ 0.66
ABLIM3-203ENST00000356541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.18■□□□□ 0.66
ABLIM3-203ENST00000356541 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
ABLIM3-203ENST00000356541 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
ABLIM3-203ENST00000356541 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
ABLIM3-203ENST00000356541 GTF3C3Q9Y5Q9 886 aa19.14■□□□□ 0.65
ABLIM3-203ENST00000356541 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
ABLIM3-203ENST00000356541 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
ABLIM3-203ENST00000356541 YTHDC1Q96MU7 727 aaKnown RBP19.11■□□□□ 0.65
ABLIM3-203ENST00000356541 GRIN2BQ13224 1484 aa19.08■□□□□ 0.65
ABLIM3-203ENST00000356541 PBRM1Q86U86 1689 aa19.08■□□□□ 0.65
ABLIM3-203ENST00000356541 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
ABLIM3-203ENST00000356541 MTUS2Q5JR59 1369 aa19.08■□□□□ 0.64
ABLIM3-203ENST00000356541 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
ABLIM3-203ENST00000356541 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
ABLIM3-203ENST00000356541 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
ABLIM3-203ENST00000356541 EHBP1L1Q8N3D4 1523 aa19.02■□□□□ 0.64
ABLIM3-203ENST00000356541 SUPT6HQ7KZ85 1726 aaKnown RBP19.02■□□□□ 0.63
ABLIM3-203ENST00000356541 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
ABLIM3-203ENST00000356541 NCOA2Q15596 1464 aa19■□□□□ 0.63
ABLIM3-203ENST00000356541 TIMELESSQ9UNS1 1208 aa18.99■□□□□ 0.63
ABLIM3-203ENST00000356541 CCDC18Q5T9S5 1454 aa18.99■□□□□ 0.63
ABLIM3-203ENST00000356541 IQGAP2Q13576 1575 aa18.99■□□□□ 0.63
ABLIM3-203ENST00000356541 MYOM3Q5VTT5 1437 aa18.98■□□□□ 0.63
ABLIM3-203ENST00000356541 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
ABLIM3-203ENST00000356541 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
ABLIM3-203ENST00000356541 UGGT2Q9NYU1 1516 aa18.94■□□□□ 0.62
ABLIM3-203ENST00000356541 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
ABLIM3-203ENST00000356541 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
ABLIM3-203ENST00000356541 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
ABLIM3-203ENST00000356541 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
ABLIM3-203ENST00000356541 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
ABLIM3-203ENST00000356541 MAGI3Q5TCQ9 1506 aa18.9■□□□□ 0.62
ABLIM3-203ENST00000356541 UACAQ9BZF9 1416 aa18.89■□□□□ 0.61
ABLIM3-203ENST00000356541 WDR62O43379 1518 aa18.88■□□□□ 0.61
ABLIM3-203ENST00000356541 EPRSP07814 1512 aaKnown RBP18.87■□□□□ 0.61
ABLIM3-203ENST00000356541 NAIPQ13075 1403 aa18.86■□□□□ 0.61
ABLIM3-203ENST00000356541 TCOF1Q13428 1488 aaKnown RBP18.86■□□□□ 0.61
ABLIM3-203ENST00000356541 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.61
ABLIM3-203ENST00000356541 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.61
ABLIM3-203ENST00000356541 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
ABLIM3-203ENST00000356541 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
ABLIM3-203ENST00000356541 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
ABLIM3-203ENST00000356541 MIA2Q96PC5 1412 aa18.79■□□□□ 0.6
ABLIM3-203ENST00000356541 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
ABLIM3-203ENST00000356541 AKNAQ7Z591 1439 aa18.78■□□□□ 0.6
ABLIM3-203ENST00000356541 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
ABLIM3-203ENST00000356541 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
ABLIM3-203ENST00000356541 GRIN2AQ12879 1464 aa18.75■□□□□ 0.59
ABLIM3-203ENST00000356541 DISP1Q96F81 1524 aa18.75■□□□□ 0.59
ABLIM3-203ENST00000356541 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
ABLIM3-203ENST00000356541 RAPGEF6Q8TEU7 1601 aa18.71■□□□□ 0.59
ABLIM3-203ENST00000356541 RRP7BPQ9NSQ0 103 aa18.7■□□□□ 0.58
ABLIM3-203ENST00000356541 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
ABLIM3-203ENST00000356541 MAGI1Q96QZ7 1491 aaPredicted RBP18.69■□□□□ 0.58
ABLIM3-203ENST00000356541 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
ABLIM3-203ENST00000356541 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
ABLIM3-203ENST00000356541 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
ABLIM3-203ENST00000356541 KDM6BO15054 1643 aa18.64■□□□□ 0.58
ABLIM3-203ENST00000356541 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.58
ABLIM3-203ENST00000356541 CDK11AQ9UQ88 783 aaPredicted RBP18.64■□□□□ 0.57
ABLIM3-203ENST00000356541 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
ABLIM3-203ENST00000356541 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
ABLIM3-203ENST00000356541 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
ABLIM3-203ENST00000356541 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
ABLIM3-203ENST00000356541 DAPK1P53355 1430 aa18.62■□□□□ 0.57
ABLIM3-203ENST00000356541 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
ABLIM3-203ENST00000356541 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
ABLIM3-203ENST00000356541 CEP170Q5SW79 1584 aa18.61■□□□□ 0.57
ABLIM3-203ENST00000356541 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
ABLIM3-203ENST00000356541 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
ABLIM3-203ENST00000356541 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
ABLIM3-203ENST00000356541 ABCC5O15440 1437 aa18.58■□□□□ 0.56
ABLIM3-203ENST00000356541 MPHOSPH9Q99550 1183 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms