RNA–Protein interactions for RNA: ENST00000356541.4

ABLIM3-203, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 1 (best) BASIC

Gene ABLIM3, Length 2,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-203ENST00000356541 NISCHQ9Y2I1 1504 aa27.75■■■□□ 2.03
ABLIM3-203ENST00000356541 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
ABLIM3-203ENST00000356541 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
ABLIM3-203ENST00000356541 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
ABLIM3-203ENST00000356541 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
ABLIM3-203ENST00000356541 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
ABLIM3-203ENST00000356541 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
ABLIM3-203ENST00000356541 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
ABLIM3-203ENST00000356541 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
ABLIM3-203ENST00000356541 ABCC9O60706 1549 aa22.13■■□□□ 1.13
ABLIM3-203ENST00000356541 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
ABLIM3-203ENST00000356541 NACADO15069 1562 aa21.98■■□□□ 1.11
ABLIM3-203ENST00000356541 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
ABLIM3-203ENST00000356541 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
ABLIM3-203ENST00000356541 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
ABLIM3-203ENST00000356541 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
ABLIM3-203ENST00000356541 LOC105371045A0A1W2PR82 267 aa21.45■■□□□ 1.02
ABLIM3-203ENST00000356541 WIZO95785 1651 aa21.39■■□□□ 1.01
ABLIM3-203ENST00000356541 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
ABLIM3-203ENST00000356541 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
ABLIM3-203ENST00000356541 HRCP23327 699 aa21.32■■□□□ 1
ABLIM3-203ENST00000356541 PCGF6Q9BYE7 350 aa21.32■■□□□ 1
ABLIM3-203ENST00000356541 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
ABLIM3-203ENST00000356541 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
ABLIM3-203ENST00000356541 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
ABLIM3-203ENST00000356541 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
ABLIM3-203ENST00000356541 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
ABLIM3-203ENST00000356541 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
ABLIM3-203ENST00000356541 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
ABLIM3-203ENST00000356541 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
ABLIM3-203ENST00000356541 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
ABLIM3-203ENST00000356541 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
ABLIM3-203ENST00000356541 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
ABLIM3-203ENST00000356541 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
ABLIM3-203ENST00000356541 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
ABLIM3-203ENST00000356541 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
ABLIM3-203ENST00000356541 EEA1Q15075 1411 aa20.64■□□□□ 0.89
ABLIM3-203ENST00000356541 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
ABLIM3-203ENST00000356541 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
ABLIM3-203ENST00000356541 SOGA1O94964 1423 aa20.58■□□□□ 0.89
ABLIM3-203ENST00000356541 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
ABLIM3-203ENST00000356541 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
ABLIM3-203ENST00000356541 TNIKQ9UKE5 1360 aa20.51■□□□□ 0.87
ABLIM3-203ENST00000356541 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
ABLIM3-203ENST00000356541 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
ABLIM3-203ENST00000356541 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
ABLIM3-203ENST00000356541 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
ABLIM3-203ENST00000356541 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
ABLIM3-203ENST00000356541 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
ABLIM3-203ENST00000356541 KIF21BO75037 1637 aa20.35■□□□□ 0.85
ABLIM3-203ENST00000356541 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
ABLIM3-203ENST00000356541 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
ABLIM3-203ENST00000356541 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
ABLIM3-203ENST00000356541 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
ABLIM3-203ENST00000356541 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
ABLIM3-203ENST00000356541 CLIP1P30622 1438 aa20.14■□□□□ 0.82
ABLIM3-203ENST00000356541 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
ABLIM3-203ENST00000356541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.81
ABLIM3-203ENST00000356541 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
ABLIM3-203ENST00000356541 RAPGEF2Q9Y4G8 1499 aa20.12■□□□□ 0.81
ABLIM3-203ENST00000356541 CFTRP13569 1480 aa20.07■□□□□ 0.8
ABLIM3-203ENST00000356541 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
ABLIM3-203ENST00000356541 CUX1P39880 1505 aa20.05■□□□□ 0.8
ABLIM3-203ENST00000356541 ERICH3Q5RHP9 1530 aa20.05■□□□□ 0.8
ABLIM3-203ENST00000356541 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
ABLIM3-203ENST00000356541 PRXQ9BXM0 1461 aa20■□□□□ 0.79
ABLIM3-203ENST00000356541 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
ABLIM3-203ENST00000356541 APLP2Q06481 763 aa19.93■□□□□ 0.78
ABLIM3-203ENST00000356541 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
ABLIM3-203ENST00000356541 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
ABLIM3-203ENST00000356541 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
ABLIM3-203ENST00000356541 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
ABLIM3-203ENST00000356541 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
ABLIM3-203ENST00000356541 CUX2O14529 1486 aa19.75■□□□□ 0.75
ABLIM3-203ENST00000356541 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
ABLIM3-203ENST00000356541 IGF1RP08069 1367 aa19.7■□□□□ 0.74
ABLIM3-203ENST00000356541 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
ABLIM3-203ENST00000356541 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
ABLIM3-203ENST00000356541 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
ABLIM3-203ENST00000356541 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
ABLIM3-203ENST00000356541 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
ABLIM3-203ENST00000356541 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
ABLIM3-203ENST00000356541 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
ABLIM3-203ENST00000356541 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
ABLIM3-203ENST00000356541 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 TIAM1Q13009 1591 aa19.5■□□□□ 0.71
ABLIM3-203ENST00000356541 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
ABLIM3-203ENST00000356541 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
ABLIM3-203ENST00000356541 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
ABLIM3-203ENST00000356541 NESP48681 1621 aa19.48■□□□□ 0.71
ABLIM3-203ENST00000356541 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
ABLIM3-203ENST00000356541 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
ABLIM3-203ENST00000356541 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
ABLIM3-203ENST00000356541 CUL7Q14999 1698 aa19.46■□□□□ 0.71
ABLIM3-203ENST00000356541 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
ABLIM3-203ENST00000356541 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
ABLIM3-203ENST00000356541 CENPBP07199 599 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms