RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 CFAP43Q8NDM7 1665 aa14.01□□□□□ -0.17
RPE-201ENST00000354506 RAB3GAP2Q9H2M9 1393 aa13.98□□□□□ -0.17
RPE-201ENST00000354506 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
RPE-201ENST00000354506 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
RPE-201ENST00000354506 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
RPE-201ENST00000354506 FHAD1B1AJZ9 1412 aa13.96□□□□□ -0.18
RPE-201ENST00000354506 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
RPE-201ENST00000354506 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
RPE-201ENST00000354506 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
RPE-201ENST00000354506 PCF11O94913 1555 aaKnown RBP13.95□□□□□ -0.18
RPE-201ENST00000354506 SETD5Q9C0A6 1442 aa13.94□□□□□ -0.18
RPE-201ENST00000354506 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■□□□ 13.2
RPE-201ENST00000354506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
RPE-201ENST00000354506 EFCAB5A4FU69 1503 aa13.91□□□□□ -0.18
RPE-201ENST00000354506 CUL7Q14999 1698 aa13.91□□□□□ -0.18
RPE-201ENST00000354506 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
RPE-201ENST00000354506 ATP1B4Q9UN42 357 aaPredicted RBP13.9□□□□□ -0.18
RPE-201ENST00000354506 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
RPE-201ENST00000354506 FYCO1Q9BQS8 1478 aa13.9□□□□□ -0.18
RPE-201ENST00000354506 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
RPE-201ENST00000354506 CASKIN1Q8WXD9 1431 aa13.89□□□□□ -0.19
RPE-201ENST00000354506 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
RPE-201ENST00000354506 CTTNBP2Q8WZ74 1663 aa13.88□□□□□ -0.19
RPE-201ENST00000354506 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
RPE-201ENST00000354506 FHOD3Q2V2M9 1422 aa13.84□□□□□ -0.19
RPE-201ENST00000354506 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
RPE-201ENST00000354506 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
RPE-201ENST00000354506 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
RPE-201ENST00000354506 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
RPE-201ENST00000354506 LRRIQ1Q96JM4 1722 aa13.81□□□□□ -0.2
RPE-201ENST00000354506 NESP48681 1621 aa13.81□□□□□ -0.2
RPE-201ENST00000354506 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
RPE-201ENST00000354506 DDX10Q13206 875 aaKnown RBP13.8□□□□□ -0.2
RPE-201ENST00000354506 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
RPE-201ENST00000354506 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
RPE-201ENST00000354506 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
RPE-201ENST00000354506 SIN3AQ96ST3 1273 aa13.78□□□□□ -0.2
RPE-201ENST00000354506 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
RPE-201ENST00000354506 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
RPE-201ENST00000354506 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
RPE-201ENST00000354506 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
RPE-201ENST00000354506 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
RPE-201ENST00000354506 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
RPE-201ENST00000354506 PTPRKQ15262 1439 aa13.74□□□□□ -0.21
RPE-201ENST00000354506 FKBP8Q14318 412 aa13.74□□□□□ -0.21
RPE-201ENST00000354506 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
RPE-201ENST00000354506 HFM1A2PYH4 1435 aa13.73□□□□□ -0.21
RPE-201ENST00000354506 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
RPE-201ENST00000354506 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.21
RPE-201ENST00000354506 UACAQ9BZF9 1416 aa13.69□□□□□ -0.22
RPE-201ENST00000354506 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
RPE-201ENST00000354506 MYT1Q01538 1121 aa13.69□□□□□ -0.22
RPE-201ENST00000354506 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
RPE-201ENST00000354506 KDM5BQ9UGL1 1544 aa13.68□□□□□ -0.22
RPE-201ENST00000354506 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
RPE-201ENST00000354506 NCOA2Q15596 1464 aa13.68□□□□□ -0.22
RPE-201ENST00000354506 TARBP1Q13395 1621 aaKnown RBP13.67□□□□□ -0.22
RPE-201ENST00000354506 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
RPE-201ENST00000354506 NAIPQ13075 1403 aa13.67□□□□□ -0.22
RPE-201ENST00000354506 MYOM3Q5VTT5 1437 aa13.67□□□□□ -0.22
RPE-201ENST00000354506 SUPT6HQ7KZ85 1726 aaKnown RBP13.67□□□□□ -0.22
RPE-201ENST00000354506 UGGT2Q9NYU1 1516 aa13.66□□□□□ -0.22
RPE-201ENST00000354506 TDRD9Q8NDG6 1382 aaKnown RBP13.66□□□□□ -0.22
RPE-201ENST00000354506 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
RPE-201ENST00000354506 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
RPE-201ENST00000354506 EHBP1L1Q8N3D4 1523 aa13.65□□□□□ -0.22
RPE-201ENST00000354506 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
RPE-201ENST00000354506 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
RPE-201ENST00000354506 CCER2I3L3R5 266 aa13.63□□□□□ -0.23
RPE-201ENST00000354506 PDS5BQ9NTI5 1447 aa13.62□□□□□ -0.23
RPE-201ENST00000354506 DENND4BO75064 1496 aaPredicted RBP13.62□□□□□ -0.23
RPE-201ENST00000354506 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
RPE-201ENST00000354506 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
RPE-201ENST00000354506 PBRM1Q86U86 1689 aa13.58□□□□□ -0.23
RPE-201ENST00000354506 AKNAQ7Z591 1439 aa13.58□□□□□ -0.24
RPE-201ENST00000354506 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
RPE-201ENST00000354506 TONSLQ96HA7 1378 aa13.57□□□□□ -0.24
RPE-201ENST00000354506 EPRSP07814 1512 aaKnown RBP13.54□□□□□ -0.24
RPE-201ENST00000354506 KDM6BO15054 1643 aa13.54□□□□□ -0.24
RPE-201ENST00000354506 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
RPE-201ENST00000354506 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
RPE-201ENST00000354506 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
RPE-201ENST00000354506 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
RPE-201ENST00000354506 ANP32EQ9BTT0 268 aa13.53□□□□□ -0.24
RPE-201ENST00000354506 NEFLP07196 543 aa13.53□□□□□ -0.24
RPE-201ENST00000354506 WDR62O43379 1518 aa13.52□□□□□ -0.24
RPE-201ENST00000354506 ARID3CA6NKF2 412 aa13.52□□□□□ -0.24
RPE-201ENST00000354506 ANP32CO43423 234 aa13.51□□□□□ -0.25
RPE-201ENST00000354506 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
RPE-201ENST00000354506 CDK13Q14004 1512 aaKnown RBP13.47□□□□□ -0.25
RPE-201ENST00000354506 ROCK1Q13464 1354 aa13.45□□□□□ -0.26
RPE-201ENST00000354506 HNRNPUQ00839 825 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPE-201ENST00000354506 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
RPE-201ENST00000354506 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
RPE-201ENST00000354506 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
RPE-201ENST00000354506 DISP1Q96F81 1524 aa13.44□□□□□ -0.26
RPE-201ENST00000354506 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
RPE-201ENST00000354506 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
RPE-201ENST00000354506 MPHOSPH9Q99550 1183 aa13.43□□□□□ -0.26
RPE-201ENST00000354506 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms