RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 ARID4BQ4LE39 1312 aaPredicted RBP19.56■□□□□ 0.72
SPPL3-201ENST00000353487 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
SPPL3-201ENST00000353487 SALL2Q9Y467 1007 aaPredicted RBP19.52■□□□□ 0.72
SPPL3-201ENST00000353487 TONSLQ96HA7 1378 aa19.51■□□□□ 0.71
SPPL3-201ENST00000353487 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
SPPL3-201ENST00000353487 NOP58Q9Y2X3 529 aaKnown RBP19.48■□□□□ 0.71
SPPL3-201ENST00000353487 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
SPPL3-201ENST00000353487 NAP1L5Q96NT1 182 aaPredicted RBP19.47■□□□□ 0.71
SPPL3-201ENST00000353487 SMARCA4P51532 1647 aa19.45■□□□□ 0.7
SPPL3-201ENST00000353487 AMER1Q5JTC6 1135 aaPredicted RBP19.45■□□□□ 0.7
SPPL3-201ENST00000353487 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
SPPL3-201ENST00000353487 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
SPPL3-201ENST00000353487 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
SPPL3-201ENST00000353487 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
SPPL3-201ENST00000353487 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
SPPL3-201ENST00000353487 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
SPPL3-201ENST00000353487 PPP4R2Q9NY27 417 aa19.38■□□□□ 0.69
SPPL3-201ENST00000353487 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
SPPL3-201ENST00000353487 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
SPPL3-201ENST00000353487 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
SPPL3-201ENST00000353487 CHIC2Q9UKJ5 165 aa19.3■□□□□ 0.68
SPPL3-201ENST00000353487 EEA1Q15075 1411 aa19.28■□□□□ 0.68
SPPL3-201ENST00000353487 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
SPPL3-201ENST00000353487 A0A0U1RQG5 324 aaPredicted RBP19.24■□□□□ 0.67
SPPL3-201ENST00000353487 ARID3AQ99856 593 aa19.24■□□□□ 0.67
SPPL3-201ENST00000353487 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
SPPL3-201ENST00000353487 MSH5O43196 834 aa19.22■□□□□ 0.67
SPPL3-201ENST00000353487 CCER2I3L3R5 266 aa19.22■□□□□ 0.67
SPPL3-201ENST00000353487 PKNOX2Q96KN3 472 aa19.2■□□□□ 0.66
SPPL3-201ENST00000353487 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
SPPL3-201ENST00000353487 IL27Q8NEV9 243 aa19.19■□□□□ 0.66
SPPL3-201ENST00000353487 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
SPPL3-201ENST00000353487 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
SPPL3-201ENST00000353487 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
SPPL3-201ENST00000353487 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.662e-6■■■■■ 26.9
SPPL3-201ENST00000353487 ANP32BQ92688 251 aaKnown RBP19.16■□□□□ 0.66
SPPL3-201ENST00000353487 RRP7BPQ9NSQ0 103 aa19.13■□□□□ 0.65
SPPL3-201ENST00000353487 FANCIQ9NVI1 1328 aa19.13■□□□□ 0.65
SPPL3-201ENST00000353487 RAB3GAP2Q9H2M9 1393 aa19.13■□□□□ 0.65
SPPL3-201ENST00000353487 RAPGEF2Q9Y4G8 1499 aa19.12■□□□□ 0.65
SPPL3-201ENST00000353487 PPM1GO15355 546 aaPredicted RBP19.11■□□□□ 0.65
SPPL3-201ENST00000353487 PODXL2Q9NZ53 605 aa19.1■□□□□ 0.65
SPPL3-201ENST00000353487 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
SPPL3-201ENST00000353487 TRIM44Q96DX7 344 aaPredicted RBP19.1■□□□□ 0.65
SPPL3-201ENST00000353487 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
SPPL3-201ENST00000353487 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
SPPL3-201ENST00000353487 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
SPPL3-201ENST00000353487 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
SPPL3-201ENST00000353487 IPO9Q96P70 1041 aaKnown RBP19.03■□□□□ 0.64
SPPL3-201ENST00000353487 CANXP27824 592 aaKnown RBP19.02■□□□□ 0.63
SPPL3-201ENST00000353487 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
SPPL3-201ENST00000353487 HSPA5P11021 654 aaKnown RBP19■□□□□ 0.63
SPPL3-201ENST00000353487 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
SPPL3-201ENST00000353487 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
SPPL3-201ENST00000353487 HSP90AA2PQ14568 343 aaPredicted RBP18.98■□□□□ 0.63
SPPL3-201ENST00000353487 PNNQ9H307 717 aaKnown RBP18.96■□□□□ 0.63
SPPL3-201ENST00000353487 SETD5Q9C0A6 1442 aa18.96■□□□□ 0.63
SPPL3-201ENST00000353487 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
SPPL3-201ENST00000353487 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
SPPL3-201ENST00000353487 CDK11BP21127 795 aaKnown RBP18.93■□□□□ 0.62
SPPL3-201ENST00000353487 ZNF777Q9ULD5 760 aaPredicted RBP18.92■□□□□ 0.62
SPPL3-201ENST00000353487 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
SPPL3-201ENST00000353487 DDRGK1Q96HY6 314 aa18.92■□□□□ 0.62
SPPL3-201ENST00000353487 ZBTB7CA1YPR0 619 aa18.91■□□□□ 0.62
SPPL3-201ENST00000353487 FOXD1Q16676 465 aa18.91■□□□□ 0.62
SPPL3-201ENST00000353487 RGS3P49796 1198 aa18.9■□□□□ 0.62
SPPL3-201ENST00000353487 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
SPPL3-201ENST00000353487 FBLN2P98095 1184 aa18.9■□□□□ 0.62
SPPL3-201ENST00000353487 UPF2Q9HAU5 1272 aaKnown RBP18.9■□□□□ 0.62
SPPL3-201ENST00000353487 SLC4A3P48751 1232 aa18.89■□□□□ 0.61
SPPL3-201ENST00000353487 CUX2O14529 1486 aa18.89■□□□□ 0.61
SPPL3-201ENST00000353487 GZF1Q9H116 711 aaPredicted RBP18.86■□□□□ 0.61
SPPL3-201ENST00000353487 BRPF3Q9ULD4 1205 aa18.86■□□□□ 0.61
SPPL3-201ENST00000353487 DNTTIP2Q5QJE6 756 aaKnown RBP18.83■□□□□ 0.6
SPPL3-201ENST00000353487 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
SPPL3-201ENST00000353487 SPRYD3Q8NCJ5 442 aa18.8■□□□□ 0.6
SPPL3-201ENST00000353487 CARMIL1Q5VZK9 1371 aa18.79■□□□□ 0.6
SPPL3-201ENST00000353487 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
SPPL3-201ENST00000353487 NCLP19338 710 aaKnown RBP18.77■□□□□ 0.6
SPPL3-201ENST00000353487 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
SPPL3-201ENST00000353487 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
SPPL3-201ENST00000353487 TPRNQ4KMQ1 711 aa18.74■□□□□ 0.59
SPPL3-201ENST00000353487 KIF21BO75037 1637 aa18.73■□□□□ 0.59
SPPL3-201ENST00000353487 PDE4AP27815 886 aa18.73■□□□□ 0.59
SPPL3-201ENST00000353487 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
SPPL3-201ENST00000353487 UBE2Q2Q8WVN8 375 aa18.72■□□□□ 0.59
SPPL3-201ENST00000353487 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
SPPL3-201ENST00000353487 EXOC6Q8TAG9 804 aa18.72■□□□□ 0.59
SPPL3-201ENST00000353487 BECN1Q14457 450 aa18.71■□□□□ 0.59
SPPL3-201ENST00000353487 GSE1Q14687 1217 aa18.71■□□□□ 0.59
SPPL3-201ENST00000353487 NCAPD3P42695 1498 aa18.71■□□□□ 0.58
SPPL3-201ENST00000353487 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
SPPL3-201ENST00000353487 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
SPPL3-201ENST00000353487 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
SPPL3-201ENST00000353487 RCAN3Q9UKA8 241 aa18.69■□□□□ 0.58
SPPL3-201ENST00000353487 PTMAP06454 111 aaKnown RBP18.68■□□□□ 0.58
SPPL3-201ENST00000353487 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
SPPL3-201ENST00000353487 PLIN1O60240 522 aa18.68■□□□□ 0.58
SPPL3-201ENST00000353487 IGF1RP08069 1367 aa18.66■□□□□ 0.58
SPPL3-201ENST00000353487 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms