RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
MSR1-202ENST00000350896 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
MSR1-202ENST00000350896 MAPKBP1O60336 1514 aa9.44□□□□□ -0.9
MSR1-202ENST00000350896 PPM1GO15355 546 aaPredicted RBP9.44□□□□□ -0.9
MSR1-202ENST00000350896 PKNOX2Q96KN3 472 aa9.44□□□□□ -0.9
MSR1-202ENST00000350896 ANP32AP39687 249 aaKnown RBP9.43□□□□□ -0.9
MSR1-202ENST00000350896 BCANQ96GW7 911 aa9.43□□□□□ -0.9
MSR1-202ENST00000350896 SOGA1O94964 1423 aa9.41□□□□□ -0.9
MSR1-202ENST00000350896 HNRNPUL2Q1KMD3 747 aaKnown RBP9.41□□□□□ -0.9
MSR1-202ENST00000350896 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
MSR1-202ENST00000350896 PEG3Q9GZU2 1588 aa9.39□□□□□ -0.91
MSR1-202ENST00000350896 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
MSR1-202ENST00000350896 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
MSR1-202ENST00000350896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.38□□□□□ -0.91
MSR1-202ENST00000350896 RNF123Q5XPI4 1314 aa9.36□□□□□ -0.91
MSR1-202ENST00000350896 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
MSR1-202ENST00000350896 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
MSR1-202ENST00000350896 UBTFP17480 764 aaKnown RBP9.35□□□□□ -0.91
MSR1-202ENST00000350896 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
MSR1-202ENST00000350896 FHAD1B1AJZ9 1412 aa9.35□□□□□ -0.91
MSR1-202ENST00000350896 BICRAQ9NZM4 1560 aa9.34□□□□□ -0.91
MSR1-202ENST00000350896 ZBED9Q6R2W3 1325 aa9.34□□□□□ -0.91
MSR1-202ENST00000350896 NCOA2Q15596 1464 aa9.33□□□□□ -0.92
MSR1-202ENST00000350896 ITGAEP38570 1179 aa9.33□□□□□ -0.92
MSR1-202ENST00000350896 SETD5Q9C0A6 1442 aa9.33□□□□□ -0.92
MSR1-202ENST00000350896 MS4A1P11836 297 aa9.32□□□□□ -0.92
MSR1-202ENST00000350896 SMG6Q86US8 1419 aaKnown RBP9.32□□□□□ -0.92
MSR1-202ENST00000350896 ABCA5Q8WWZ7 1642 aa9.31□□□□□ -0.92
MSR1-202ENST00000350896 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
MSR1-202ENST00000350896 IL27Q8NEV9 243 aa9.31□□□□□ -0.92
MSR1-202ENST00000350896 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
MSR1-202ENST00000350896 SMARCA4P51532 1647 aa9.31□□□□□ -0.92
MSR1-202ENST00000350896 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
MSR1-202ENST00000350896 POLR1AO95602 1720 aaPredicted RBP9.29□□□□□ -0.92
MSR1-202ENST00000350896 TCERG1O14776 1098 aaKnown RBP9.29□□□□□ -0.92
MSR1-202ENST00000350896 RRP9O43818 475 aaKnown RBP9.29□□□□□ -0.92
MSR1-202ENST00000350896 PAK3O75914 559 aaPredicted RBP9.29□□□□□ -0.92
MSR1-202ENST00000350896 GSE1Q14687 1217 aa9.28□□□□□ -0.92
MSR1-202ENST00000350896 RAB3GAP2Q9H2M9 1393 aa9.28□□□□□ -0.92
MSR1-202ENST00000350896 DDX10Q13206 875 aaKnown RBP9.28□□□□□ -0.92
MSR1-202ENST00000350896 RUSC2Q8N2Y8 1516 aa9.28□□□□□ -0.92
MSR1-202ENST00000350896 PRXQ9BXM0 1461 aa9.27□□□□□ -0.93
MSR1-202ENST00000350896 CENPJQ9HC77 1338 aaPredicted RBP9.27□□□□□ -0.93
MSR1-202ENST00000350896 NBR1Q14596 966 aa9.27□□□□□ -0.93
MSR1-202ENST00000350896 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
MSR1-202ENST00000350896 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
MSR1-202ENST00000350896 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
MSR1-202ENST00000350896 RAPGEF2Q9Y4G8 1499 aa9.23□□□□□ -0.93
MSR1-202ENST00000350896 NEFMP07197 916 aa9.23□□□□□ -0.93
MSR1-202ENST00000350896 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
MSR1-202ENST00000350896 EHMT2Q96KQ7 1210 aa9.23□□□□□ -0.93
MSR1-202ENST00000350896 CNTLNQ9NXG0 1405 aa9.23□□□□□ -0.93
MSR1-202ENST00000350896 TIAM1Q13009 1591 aa9.22□□□□□ -0.93
MSR1-202ENST00000350896 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
MSR1-202ENST00000350896 PODXL2Q9NZ53 605 aa9.2□□□□□ -0.94
MSR1-202ENST00000350896 INSRP06213 1382 aa9.19□□□□□ -0.94
MSR1-202ENST00000350896 CCDC18Q5T9S5 1454 aa9.19□□□□□ -0.94
MSR1-202ENST00000350896 ZMYM4Q5VZL5 1548 aa9.19□□□□□ -0.94
MSR1-202ENST00000350896 CCDC144AA2RUR9 1427 aa9.18□□□□□ -0.94
MSR1-202ENST00000350896 L1TD1Q5T7N2 865 aaKnown RBP9.18□□□□□ -0.94
MSR1-202ENST00000350896 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.18□□□□□ -0.94
MSR1-202ENST00000350896 ZMYND15Q9H091 742 aa9.17□□□□□ -0.94
MSR1-202ENST00000350896 UACAQ9BZF9 1416 aa9.16□□□□□ -0.94
MSR1-202ENST00000350896 KDM5BQ9UGL1 1544 aa9.16□□□□□ -0.94
MSR1-202ENST00000350896 NUDCQ9Y266 331 aa9.16□□□□□ -0.94
MSR1-202ENST00000350896 BACH2Q9BYV9 841 aa9.16□□□□□ -0.94
MSR1-202ENST00000350896 KTN1Q86UP2 1357 aaKnown RBP9.15□□□□□ -0.95
MSR1-202ENST00000350896 B4GALNT3Q6L9W6 998 aa9.14□□□□□ -0.95
MSR1-202ENST00000350896 LRRC9Q6ZRR7 1453 aa9.14□□□□□ -0.95
MSR1-202ENST00000350896 NCOA1Q15788 1441 aa9.14□□□□□ -0.95
MSR1-202ENST00000350896 TONSLQ96HA7 1378 aa9.14□□□□□ -0.95
MSR1-202ENST00000350896 ISY1Q9ULR0 285 aaKnown RBP9.13□□□□□ -0.95
MSR1-202ENST00000350896 ARID4BQ4LE39 1312 aaPredicted RBP9.13□□□□□ -0.95
MSR1-202ENST00000350896 AQRO60306 1485 aaKnown RBP eCLIP9.12□□□□□ -0.95
MSR1-202ENST00000350896 CLCN1P35523 988 aa9.12□□□□□ -0.95
MSR1-202ENST00000350896 CALD1Q05682 793 aaKnown RBP9.12□□□□□ -0.95
MSR1-202ENST00000350896 HSP90AA2PQ14568 343 aaPredicted RBP9.12□□□□□ -0.95
MSR1-202ENST00000350896 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
MSR1-202ENST00000350896 HFM1A2PYH4 1435 aa9.11□□□□□ -0.95
MSR1-202ENST00000350896 TERF1P54274 439 aa9.11□□□□□ -0.95
MSR1-202ENST00000350896 NFKBIBQ15653 356 aa9.11□□□□□ -0.95
MSR1-202ENST00000350896 BRPF3Q9ULD4 1205 aa9.11□□□□□ -0.95
MSR1-202ENST00000350896 ARHGAP35Q9NRY4 1499 aa9.1□□□□□ -0.95
MSR1-202ENST00000350896 HECW1Q76N89 1606 aa9.1□□□□□ -0.95
MSR1-202ENST00000350896 HSP90AA1P07900 732 aaKnown RBP9.1□□□□□ -0.95
MSR1-202ENST00000350896 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
MSR1-202ENST00000350896 TPM2P07951 284 aa9.1□□□□□ -0.95
MSR1-202ENST00000350896 PDE4AP27815 886 aa9.1□□□□□ -0.95
MSR1-202ENST00000350896 MAP7D2Q96T17 732 aa9.1□□□□□ -0.95
MSR1-202ENST00000350896 PRKRIP1Q9H875 184 aaPredicted RBP9.09□□□□□ -0.95
MSR1-202ENST00000350896 KANK4Q5T7N3 995 aaPredicted RBP9.08□□□□□ -0.96
MSR1-202ENST00000350896 PDE3BQ13370 1112 aa9.08□□□□□ -0.96
MSR1-202ENST00000350896 PDCL3Q9H2J4 239 aa9.08□□□□□ -0.96
MSR1-202ENST00000350896 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
MSR1-202ENST00000350896 FRAT1Q92837 279 aaPredicted RBP9.08□□□□□ -0.96
MSR1-202ENST00000350896 CC2D2AQ9P2K1 1620 aa9.07□□□□□ -0.96
MSR1-202ENST00000350896 MIA2Q96PC5 1412 aa9.07□□□□□ -0.96
MSR1-202ENST00000350896 VIRMAQ69YN4 1812 aaKnown RBP9.06□□□□□ -0.96
MSR1-202ENST00000350896 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
MSR1-202ENST00000350896 ZMYM3Q14202 1370 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms