RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 NISCHQ9Y2I1 1504 aa12.39□□□□□ -0.43
MSR1-202ENST00000350896 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
MSR1-202ENST00000350896 MYT1Q01538 1121 aa11.95□□□□□ -0.5
MSR1-202ENST00000350896 HRCP23327 699 aa11.67□□□□□ -0.54
MSR1-202ENST00000350896 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
MSR1-202ENST00000350896 DCAF1Q9Y4B6 1507 aa11.25□□□□□ -0.61
MSR1-202ENST00000350896 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
MSR1-202ENST00000350896 CCDC180Q9P1Z9 1646 aa11.17□□□□□ -0.62
MSR1-202ENST00000350896 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
MSR1-202ENST00000350896 MYO15BQ96JP2 1530 aa10.96□□□□□ -0.65
MSR1-202ENST00000350896 PCGF6Q9BYE7 350 aa10.93□□□□□ -0.66
MSR1-202ENST00000350896 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
MSR1-202ENST00000350896 PPARGC1BQ86YN6 1023 aaKnown RBP10.87□□□□□ -0.67
MSR1-202ENST00000350896 CHIC1Q5VXU3 224 aa10.83□□□□□ -0.67
MSR1-202ENST00000350896 ACIN1Q9UKV3 1341 aaKnown RBP10.82□□□□□ -0.68
MSR1-202ENST00000350896 CENPBP07199 599 aaPredicted RBP10.77□□□□□ -0.69
MSR1-202ENST00000350896 CLSPNQ9HAW4 1339 aa10.71□□□□□ -0.7
MSR1-202ENST00000350896 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
MSR1-202ENST00000350896 NEUROD1Q13562 356 aa10.56□□□□□ -0.72
MSR1-202ENST00000350896 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
MSR1-202ENST00000350896 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
MSR1-202ENST00000350896 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
MSR1-202ENST00000350896 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
MSR1-202ENST00000350896 BCL11AQ9H165 835 aa10.45□□□□□ -0.74
MSR1-202ENST00000350896 ANP32EQ9BTT0 268 aa10.42□□□□□ -0.74
MSR1-202ENST00000350896 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
MSR1-202ENST00000350896 SHROOM4Q9ULL8 1493 aa10.39□□□□□ -0.75
MSR1-202ENST00000350896 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
MSR1-202ENST00000350896 MYT1LQ9UL68 1186 aa10.31□□□□□ -0.76
MSR1-202ENST00000350896 APLP2Q06481 763 aa10.31□□□□□ -0.76
MSR1-202ENST00000350896 ABCC9O60706 1549 aa10.27□□□□□ -0.77
MSR1-202ENST00000350896 LOC105371045A0A1W2PR82 267 aa10.26□□□□□ -0.77
MSR1-202ENST00000350896 FAM9AQ8IZU1 332 aaPredicted RBP10.24□□□□□ -0.77
MSR1-202ENST00000350896 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
MSR1-202ENST00000350896 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
MSR1-202ENST00000350896 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
MSR1-202ENST00000350896 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
MSR1-202ENST00000350896 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
MSR1-202ENST00000350896 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
MSR1-202ENST00000350896 SUPT16HQ9Y5B9 1047 aaKnown RBP10.09□□□□□ -0.79
MSR1-202ENST00000350896 ERICH6BQ5W0A0 696 aa10.07□□□□□ -0.8
MSR1-202ENST00000350896 CSRNP3Q8WYN3 585 aa10.06□□□□□ -0.8
MSR1-202ENST00000350896 FANCIQ9NVI1 1328 aa9.99□□□□□ -0.81
MSR1-202ENST00000350896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
MSR1-202ENST00000350896 MIER1Q8N108 512 aa9.98□□□□□ -0.81
MSR1-202ENST00000350896 EEA1Q15075 1411 aa9.95□□□□□ -0.82
MSR1-202ENST00000350896 RSF1Q96T23 1441 aaPredicted RBP9.94□□□□□ -0.82
MSR1-202ENST00000350896 TNIKQ9UKE5 1360 aa9.89□□□□□ -0.83
MSR1-202ENST00000350896 EIF4G1Q04637 1599 aaKnown RBP9.87□□□□□ -0.83
MSR1-202ENST00000350896 RBM19Q9Y4C8 960 aaKnown RBP9.86□□□□□ -0.83
MSR1-202ENST00000350896 UBE2Q2Q8WVN8 375 aa9.85□□□□□ -0.83
MSR1-202ENST00000350896 YTHDC1Q96MU7 727 aaKnown RBP9.85□□□□□ -0.83
MSR1-202ENST00000350896 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
MSR1-202ENST00000350896 CEP162Q5TB80 1403 aa9.81□□□□□ -0.84
MSR1-202ENST00000350896 CUX2O14529 1486 aa9.77□□□□□ -0.85
MSR1-202ENST00000350896 NEFLP07196 543 aa9.76□□□□□ -0.85
MSR1-202ENST00000350896 CCER2I3L3R5 266 aa9.73□□□□□ -0.85
MSR1-202ENST00000350896 BAZ1AQ9NRL2 1556 aaPredicted RBP9.72□□□□□ -0.85
MSR1-202ENST00000350896 SCRIBQ14160 1630 aa9.72□□□□□ -0.85
MSR1-202ENST00000350896 GOLGA3Q08378 1498 aa9.71□□□□□ -0.86
MSR1-202ENST00000350896 KIF21BO75037 1637 aa9.71□□□□□ -0.86
MSR1-202ENST00000350896 DEKP35659 375 aaKnown RBP9.7□□□□□ -0.86
MSR1-202ENST00000350896 MSH5O43196 834 aa9.7□□□□□ -0.86
MSR1-202ENST00000350896 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
MSR1-202ENST00000350896 TIMELESSQ9UNS1 1208 aa9.67□□□□□ -0.86
MSR1-202ENST00000350896 CDK11AQ9UQ88 783 aaPredicted RBP9.67□□□□□ -0.86
MSR1-202ENST00000350896 C11orf95C9JLR9 678 aaPredicted RBP9.65□□□□□ -0.86
MSR1-202ENST00000350896 DHX57Q6P158 1386 aaKnown RBP9.65□□□□□ -0.86
MSR1-202ENST00000350896 VPS8Q8N3P4 1428 aa9.64□□□□□ -0.87
MSR1-202ENST00000350896 CEP164Q9UPV0 1460 aa9.64□□□□□ -0.87
MSR1-202ENST00000350896 FKBP8Q14318 412 aa9.64□□□□□ -0.87
MSR1-202ENST00000350896 USP35Q9P2H5 1018 aa9.64□□□□□ -0.87
MSR1-202ENST00000350896 DAXXQ9UER7 740 aaPredicted RBP9.59□□□□□ -0.87
MSR1-202ENST00000350896 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
MSR1-202ENST00000350896 RRBP1Q9P2E9 1410 aaKnown RBP9.58□□□□□ -0.88
MSR1-202ENST00000350896 NOP58Q9Y2X3 529 aaKnown RBP9.57□□□□□ -0.88
MSR1-202ENST00000350896 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
MSR1-202ENST00000350896 NACADO15069 1562 aa9.56□□□□□ -0.88
MSR1-202ENST00000350896 WASHC2AQ641Q2 1341 aa9.55□□□□□ -0.88
MSR1-202ENST00000350896 TOP2AP11388 1531 aaKnown RBP9.55□□□□□ -0.88
MSR1-202ENST00000350896 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
MSR1-202ENST00000350896 PPP4R2Q9NY27 417 aa9.54□□□□□ -0.88
MSR1-202ENST00000350896 WASHC2CQ9Y4E1 1318 aa9.53□□□□□ -0.88
MSR1-202ENST00000350896 EIF5BO60841 1220 aaKnown RBP9.53□□□□□ -0.88
MSR1-202ENST00000350896 CLIP1P30622 1438 aa9.53□□□□□ -0.88
MSR1-202ENST00000350896 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
MSR1-202ENST00000350896 GLIPR1L2Q4G1C9 344 aa9.51□□□□□ -0.89
MSR1-202ENST00000350896 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
MSR1-202ENST00000350896 MROH2BQ7Z745 1585 aa9.5□□□□□ -0.89
MSR1-202ENST00000350896 MAP3K1Q13233 1512 aa9.5□□□□□ -0.89
MSR1-202ENST00000350896 PPP1R15AO75807 674 aaPredicted RBP9.49□□□□□ -0.89
MSR1-202ENST00000350896 CCDC88BA6NC98 1476 aa9.49□□□□□ -0.89
MSR1-202ENST00000350896 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
MSR1-202ENST00000350896 SALL2Q9Y467 1007 aaPredicted RBP9.49□□□□□ -0.89
MSR1-202ENST00000350896 WIZO95785 1651 aa9.47□□□□□ -0.89
MSR1-202ENST00000350896 ERICH3Q5RHP9 1530 aa9.47□□□□□ -0.89
MSR1-202ENST00000350896 ABCC8Q09428 1581 aa9.47□□□□□ -0.89
MSR1-202ENST00000350896 IPO9Q96P70 1041 aaKnown RBP9.46□□□□□ -0.89
MSR1-202ENST00000350896 CCDC136Q96JN2 1154 aa9.45□□□□□ -0.9
MSR1-202ENST00000350896 ANP32CO43423 234 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms