RNA–Protein interactions for RNA: ENST00000349241.6

PTK7-204, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 3,801 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-204ENST00000349241 ZNF777Q9ULD5 760 aaPredicted RBP18.58■□□□□ 0.56
PTK7-204ENST00000349241 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
PTK7-204ENST00000349241 CFTRP13569 1480 aa18.57■□□□□ 0.56
PTK7-204ENST00000349241 NESP48681 1621 aa18.57■□□□□ 0.56
PTK7-204ENST00000349241 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
PTK7-204ENST00000349241 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
PTK7-204ENST00000349241 ZNF326Q5BKZ1 582 aaKnown RBP18.54■□□□□ 0.56
PTK7-204ENST00000349241 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
PTK7-204ENST00000349241 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
PTK7-204ENST00000349241 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
PTK7-204ENST00000349241 ARHGAP35Q9NRY4 1499 aa18.49■□□□□ 0.55
PTK7-204ENST00000349241 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
PTK7-204ENST00000349241 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
PTK7-204ENST00000349241 NEFLP07196 543 aa18.43■□□□□ 0.54
PTK7-204ENST00000349241 ANP32CO43423 234 aa18.43■□□□□ 0.54
PTK7-204ENST00000349241 HMGXB3Q12766 1538 aa18.43■□□□□ 0.54
PTK7-204ENST00000349241 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
PTK7-204ENST00000349241 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
PTK7-204ENST00000349241 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
PTK7-204ENST00000349241 FOXD1Q16676 465 aa18.4■□□□□ 0.54
PTK7-204ENST00000349241 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
PTK7-204ENST00000349241 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
PTK7-204ENST00000349241 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
PTK7-204ENST00000349241 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
PTK7-204ENST00000349241 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
PTK7-204ENST00000349241 FKBP8Q14318 412 aa18.29■□□□□ 0.52
PTK7-204ENST00000349241 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
PTK7-204ENST00000349241 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
PTK7-204ENST00000349241 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.52
PTK7-204ENST00000349241 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.51
PTK7-204ENST00000349241 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
PTK7-204ENST00000349241 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
PTK7-204ENST00000349241 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
PTK7-204ENST00000349241 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
PTK7-204ENST00000349241 AQRO60306 1485 aaKnown RBP eCLIP18.23■□□□□ 0.512e-6■■■■■ 31
PTK7-204ENST00000349241 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
PTK7-204ENST00000349241 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
PTK7-204ENST00000349241 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
PTK7-204ENST00000349241 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
PTK7-204ENST00000349241 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
PTK7-204ENST00000349241 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
PTK7-204ENST00000349241 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
PTK7-204ENST00000349241 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
PTK7-204ENST00000349241 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
PTK7-204ENST00000349241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.55e-6■■■□□ 17.6
PTK7-204ENST00000349241 ZNF644Q9H582 1327 aaPredicted RBP18.15■□□□□ 0.5
PTK7-204ENST00000349241 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
PTK7-204ENST00000349241 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
PTK7-204ENST00000349241 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
PTK7-204ENST00000349241 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
PTK7-204ENST00000349241 MPHOSPH9Q99550 1183 aa18.08■□□□□ 0.49
PTK7-204ENST00000349241 FGD6Q6ZV73 1430 aa18.08■□□□□ 0.49
PTK7-204ENST00000349241 HSPA5P11021 654 aaKnown RBP18.08■□□□□ 0.48
PTK7-204ENST00000349241 PCF11O94913 1555 aaKnown RBP18.06■□□□□ 0.48
PTK7-204ENST00000349241 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
PTK7-204ENST00000349241 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
PTK7-204ENST00000349241 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
PTK7-204ENST00000349241 L3MBTL2Q969R5 705 aa18.05■□□□□ 0.48
PTK7-204ENST00000349241 DNMBPQ6XZF7 1577 aa18.05■□□□□ 0.48
PTK7-204ENST00000349241 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
PTK7-204ENST00000349241 RGL3Q3MIN7 710 aa18.04■□□□□ 0.48
PTK7-204ENST00000349241 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
PTK7-204ENST00000349241 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
PTK7-204ENST00000349241 TSPY4P0CV99 314 aa18.03■□□□□ 0.48
PTK7-204ENST00000349241 TSPY10P0CW01 314 aa18.03■□□□□ 0.48
PTK7-204ENST00000349241 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
PTK7-204ENST00000349241 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
PTK7-204ENST00000349241 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
PTK7-204ENST00000349241 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
PTK7-204ENST00000349241 TIMELESSQ9UNS1 1208 aa17.97■□□□□ 0.47
PTK7-204ENST00000349241 FYCO1Q9BQS8 1478 aa17.97■□□□□ 0.47
PTK7-204ENST00000349241 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
PTK7-204ENST00000349241 PKD2Q13563 968 aa17.95■□□□□ 0.46
PTK7-204ENST00000349241 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.461e-6■■□□□ 14.4
PTK7-204ENST00000349241 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
PTK7-204ENST00000349241 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
PTK7-204ENST00000349241 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
PTK7-204ENST00000349241 CDK13Q14004 1512 aaKnown RBP17.9■□□□□ 0.46
PTK7-204ENST00000349241 MAPKBP1O60336 1514 aa17.88■□□□□ 0.45
PTK7-204ENST00000349241 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
PTK7-204ENST00000349241 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
PTK7-204ENST00000349241 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
PTK7-204ENST00000349241 UACAQ9BZF9 1416 aa17.85■□□□□ 0.45
PTK7-204ENST00000349241 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
PTK7-204ENST00000349241 NAIPQ13075 1403 aa17.84■□□□□ 0.45
PTK7-204ENST00000349241 PRDM2Q13029 1718 aa17.83■□□□□ 0.44
PTK7-204ENST00000349241 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
PTK7-204ENST00000349241 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
PTK7-204ENST00000349241 LAMC3Q9Y6N6 1575 aa17.81■□□□□ 0.44
PTK7-204ENST00000349241 NUP155O75694 1391 aa17.81■□□□□ 0.44
PTK7-204ENST00000349241 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
PTK7-204ENST00000349241 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
PTK7-204ENST00000349241 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
PTK7-204ENST00000349241 NBPF8Q3BBV2 869 aa17.8■□□□□ 0.44
PTK7-204ENST00000349241 HFM1A2PYH4 1435 aa17.8■□□□□ 0.44
PTK7-204ENST00000349241 CCDC184Q52MB2 194 aa17.79■□□□□ 0.44
PTK7-204ENST00000349241 MAP3K1Q13233 1512 aa17.77■□□□□ 0.43
PTK7-204ENST00000349241 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
PTK7-204ENST00000349241 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
PTK7-204ENST00000349241 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms