RNA–Protein interactions for RNA: ENST00000347612.4

GRIN2C-202, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GRIN2C, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-202ENST00000347612 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
GRIN2C-202ENST00000347612 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
GRIN2C-202ENST00000347612 MAPKBP1O60336 1514 aa23.97■■□□□ 1.43
GRIN2C-202ENST00000347612 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
GRIN2C-202ENST00000347612 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
GRIN2C-202ENST00000347612 SIN3AQ96ST3 1273 aa23.95■■□□□ 1.42
GRIN2C-202ENST00000347612 FKBP8Q14318 412 aa23.92■■□□□ 1.42
GRIN2C-202ENST00000347612 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
GRIN2C-202ENST00000347612 ANP32EQ9BTT0 268 aa23.89■■□□□ 1.41
GRIN2C-202ENST00000347612 HIRIP3Q9BW71 556 aaPredicted RBP23.88■■□□□ 1.41
GRIN2C-202ENST00000347612 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
GRIN2C-202ENST00000347612 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
GRIN2C-202ENST00000347612 FAM50AQ14320 339 aaKnown RBP23.87■■□□□ 1.41
GRIN2C-202ENST00000347612 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
GRIN2C-202ENST00000347612 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
GRIN2C-202ENST00000347612 KIF21AQ7Z4S6 1674 aa23.84■■□□□ 1.41
GRIN2C-202ENST00000347612 P3H3Q8IVL6 736 aa23.83■■□□□ 1.4
GRIN2C-202ENST00000347612 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.4
GRIN2C-202ENST00000347612 PHLDB1Q86UU1 1377 aa23.82■■□□□ 1.4
GRIN2C-202ENST00000347612 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
GRIN2C-202ENST00000347612 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
GRIN2C-202ENST00000347612 DNMBPQ6XZF7 1577 aa23.8■■□□□ 1.4
GRIN2C-202ENST00000347612 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
GRIN2C-202ENST00000347612 IGF1RP08069 1367 aa23.77■■□□□ 1.4
GRIN2C-202ENST00000347612 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
GRIN2C-202ENST00000347612 LRRC9Q6ZRR7 1453 aa23.76■■□□□ 1.39
GRIN2C-202ENST00000347612 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
GRIN2C-202ENST00000347612 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
GRIN2C-202ENST00000347612 NEFLP07196 543 aa23.71■■□□□ 1.39
GRIN2C-202ENST00000347612 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
GRIN2C-202ENST00000347612 MAP3K1Q13233 1512 aa23.69■■□□□ 1.38
GRIN2C-202ENST00000347612 ANP32CO43423 234 aa23.66■■□□□ 1.38
GRIN2C-202ENST00000347612 RBM19Q9Y4C8 960 aaKnown RBP23.63■■□□□ 1.37
GRIN2C-202ENST00000347612 CCER2I3L3R5 266 aa23.61■■□□□ 1.37
GRIN2C-202ENST00000347612 MRC2Q9UBG0 1479 aa23.61■■□□□ 1.37
GRIN2C-202ENST00000347612 TIMELESSQ9UNS1 1208 aa23.6■■□□□ 1.37
GRIN2C-202ENST00000347612 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
GRIN2C-202ENST00000347612 PCF11O94913 1555 aaKnown RBP23.59■■□□□ 1.37
GRIN2C-202ENST00000347612 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.37
GRIN2C-202ENST00000347612 FHOD3Q2V2M9 1422 aa23.55■■□□□ 1.36
GRIN2C-202ENST00000347612 CFAP43Q8NDM7 1665 aa23.53■■□□□ 1.36
GRIN2C-202ENST00000347612 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
GRIN2C-202ENST00000347612 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
GRIN2C-202ENST00000347612 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
GRIN2C-202ENST00000347612 BCL11AQ9H165 835 aa23.46■■□□□ 1.35
GRIN2C-202ENST00000347612 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
GRIN2C-202ENST00000347612 IRX6P78412 446 aaPredicted RBP23.45■■□□□ 1.34
GRIN2C-202ENST00000347612 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
GRIN2C-202ENST00000347612 CCDC18Q5T9S5 1454 aa23.41■■□□□ 1.34
GRIN2C-202ENST00000347612 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
GRIN2C-202ENST00000347612 FYCO1Q9BQS8 1478 aa23.39■■□□□ 1.34
GRIN2C-202ENST00000347612 WDR62O43379 1518 aa23.39■■□□□ 1.33
GRIN2C-202ENST00000347612 FGD6Q6ZV73 1430 aa23.39■■□□□ 1.33
GRIN2C-202ENST00000347612 MSH5O43196 834 aa23.38■■□□□ 1.33
GRIN2C-202ENST00000347612 PTPRKQ15262 1439 aa23.37■■□□□ 1.33
GRIN2C-202ENST00000347612 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
GRIN2C-202ENST00000347612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.37■■□□□ 1.33
GRIN2C-202ENST00000347612 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
GRIN2C-202ENST00000347612 UACAQ9BZF9 1416 aa23.33■■□□□ 1.32
GRIN2C-202ENST00000347612 MTUS2Q5JR59 1369 aa23.33■■□□□ 1.32
GRIN2C-202ENST00000347612 FBLN2P98095 1184 aa23.32■■□□□ 1.32
GRIN2C-202ENST00000347612 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
GRIN2C-202ENST00000347612 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
GRIN2C-202ENST00000347612 HFM1A2PYH4 1435 aa23.3■■□□□ 1.32
GRIN2C-202ENST00000347612 PTPN23Q9H3S7 1636 aa23.28■■□□□ 1.32
GRIN2C-202ENST00000347612 EFCAB5A4FU69 1503 aa23.27■■□□□ 1.32
GRIN2C-202ENST00000347612 NAIPQ13075 1403 aa23.26■■□□□ 1.31
GRIN2C-202ENST00000347612 CDK11AQ9UQ88 783 aaPredicted RBP23.26■■□□□ 1.31
GRIN2C-202ENST00000347612 WASHC2AQ641Q2 1341 aa23.25■■□□□ 1.31
GRIN2C-202ENST00000347612 HSPA5P11021 654 aaKnown RBP23.25■■□□□ 1.31
GRIN2C-202ENST00000347612 FMN1Q68DA7 1419 aa23.23■■□□□ 1.31
GRIN2C-202ENST00000347612 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
GRIN2C-202ENST00000347612 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
GRIN2C-202ENST00000347612 CCDC184Q52MB2 194 aa23.22■■□□□ 1.31
GRIN2C-202ENST00000347612 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
GRIN2C-202ENST00000347612 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
GRIN2C-202ENST00000347612 GRIN2BQ13224 1484 aa23.21■■□□□ 1.31
GRIN2C-202ENST00000347612 CUL7Q14999 1698 aa23.2■■□□□ 1.3
GRIN2C-202ENST00000347612 ARID3CA6NKF2 412 aa23.2■■□□□ 1.3
GRIN2C-202ENST00000347612 NCOA2Q15596 1464 aa23.19■■□□□ 1.3
GRIN2C-202ENST00000347612 MYOM3Q5VTT5 1437 aa23.17■■□□□ 1.3
GRIN2C-202ENST00000347612 CTTNBP2Q8WZ74 1663 aa23.16■■□□□ 1.3
GRIN2C-202ENST00000347612 FANCIQ9NVI1 1328 aa23.16■■□□□ 1.3
GRIN2C-202ENST00000347612 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
GRIN2C-202ENST00000347612 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
GRIN2C-202ENST00000347612 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
GRIN2C-202ENST00000347612 ERICH6Q7L0X2 663 aa23.14■■□□□ 1.3
GRIN2C-202ENST00000347612 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
GRIN2C-202ENST00000347612 EIF4G2P78344 907 aaKnown RBP eCLIP23.12■■□□□ 1.29
GRIN2C-202ENST00000347612 LRRIQ1Q96JM4 1722 aa23.12■■□□□ 1.29
GRIN2C-202ENST00000347612 C11orf95C9JLR9 678 aaPredicted RBP23.09■■□□□ 1.29
GRIN2C-202ENST00000347612 FOXD1Q16676 465 aa23.09■■□□□ 1.29
GRIN2C-202ENST00000347612 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
GRIN2C-202ENST00000347612 B4GALNT3Q6L9W6 998 aa23.07■■□□□ 1.28
GRIN2C-202ENST00000347612 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
GRIN2C-202ENST00000347612 DENND4BO75064 1496 aaPredicted RBP23.06■■□□□ 1.28
GRIN2C-202ENST00000347612 L3MBTL2Q969R5 705 aa23.05■■□□□ 1.28
GRIN2C-202ENST00000347612 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
GRIN2C-202ENST00000347612 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
GRIN2C-202ENST00000347612 SUPT6HQ7KZ85 1726 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms