RNA–Protein interactions for RNA: ENST00000347612.4

GRIN2C-202, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GRIN2C, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-202ENST00000347612 NISCHQ9Y2I1 1504 aa33.36■■■□□ 2.93
GRIN2C-202ENST00000347612 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
GRIN2C-202ENST00000347612 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
GRIN2C-202ENST00000347612 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
GRIN2C-202ENST00000347612 DCAF8L2P0C7V8 631 aa28.32■■■□□ 2.12
GRIN2C-202ENST00000347612 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
GRIN2C-202ENST00000347612 MYO15BQ96JP2 1530 aa28.05■■■□□ 2.08
GRIN2C-202ENST00000347612 HRCP23327 699 aa28■■■□□ 2.07
GRIN2C-202ENST00000347612 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
GRIN2C-202ENST00000347612 PCGF6Q9BYE7 350 aa27.79■■■□□ 2.04
GRIN2C-202ENST00000347612 ABCC9O60706 1549 aa27.77■■■□□ 2.04
GRIN2C-202ENST00000347612 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
GRIN2C-202ENST00000347612 LOC105371045A0A1W2PR82 267 aa27.35■■□□□ 1.97
GRIN2C-202ENST00000347612 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
GRIN2C-202ENST00000347612 TRIM26Q12899 539 aaPredicted RBP26.96■■□□□ 1.91
GRIN2C-202ENST00000347612 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
GRIN2C-202ENST00000347612 NACADO15069 1562 aa26.86■■□□□ 1.89
GRIN2C-202ENST00000347612 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
GRIN2C-202ENST00000347612 EHMT2Q96KQ7 1210 aa26.61■■□□□ 1.85
GRIN2C-202ENST00000347612 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
GRIN2C-202ENST00000347612 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
GRIN2C-202ENST00000347612 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
GRIN2C-202ENST00000347612 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
GRIN2C-202ENST00000347612 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
GRIN2C-202ENST00000347612 SCAF1Q9H7N4 1312 aaKnown RBP26.22■■□□□ 1.79
GRIN2C-202ENST00000347612 CECR2Q9BXF3 1484 aa26.18■■□□□ 1.78
GRIN2C-202ENST00000347612 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
GRIN2C-202ENST00000347612 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
GRIN2C-202ENST00000347612 BICRAQ9NZM4 1560 aa25.97■■□□□ 1.75
GRIN2C-202ENST00000347612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
GRIN2C-202ENST00000347612 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
GRIN2C-202ENST00000347612 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
GRIN2C-202ENST00000347612 WIZO95785 1651 aa25.78■■□□□ 1.72
GRIN2C-202ENST00000347612 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
GRIN2C-202ENST00000347612 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
GRIN2C-202ENST00000347612 ACIN1Q9UKV3 1341 aaKnown RBP25.71■■□□□ 1.71
GRIN2C-202ENST00000347612 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
GRIN2C-202ENST00000347612 DIEXFQ68CQ4 756 aaKnown RBP25.61■■□□□ 1.69
GRIN2C-202ENST00000347612 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
GRIN2C-202ENST00000347612 GTF3C3Q9Y5Q9 886 aa25.52■■□□□ 1.68
GRIN2C-202ENST00000347612 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
GRIN2C-202ENST00000347612 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
GRIN2C-202ENST00000347612 CENPBP07199 599 aaPredicted RBP25.45■■□□□ 1.66
GRIN2C-202ENST00000347612 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
GRIN2C-202ENST00000347612 CEP162Q5TB80 1403 aa25.41■■□□□ 1.66
GRIN2C-202ENST00000347612 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
GRIN2C-202ENST00000347612 SOGA1O94964 1423 aa25.34■■□□□ 1.65
GRIN2C-202ENST00000347612 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
GRIN2C-202ENST00000347612 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
GRIN2C-202ENST00000347612 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
GRIN2C-202ENST00000347612 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
GRIN2C-202ENST00000347612 ZNF316A6NFI3 1004 aaPredicted RBP25.23■■□□□ 1.63
GRIN2C-202ENST00000347612 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
GRIN2C-202ENST00000347612 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
GRIN2C-202ENST00000347612 YTHDC1Q96MU7 727 aaKnown RBP25.21■■□□□ 1.63
GRIN2C-202ENST00000347612 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
GRIN2C-202ENST00000347612 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
GRIN2C-202ENST00000347612 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
GRIN2C-202ENST00000347612 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
GRIN2C-202ENST00000347612 EEA1Q15075 1411 aa25.04■■□□□ 1.6
GRIN2C-202ENST00000347612 MIER1Q8N108 512 aa25.04■■□□□ 1.6
GRIN2C-202ENST00000347612 GOLGA3Q08378 1498 aa25.02■■□□□ 1.6
GRIN2C-202ENST00000347612 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
GRIN2C-202ENST00000347612 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
GRIN2C-202ENST00000347612 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
GRIN2C-202ENST00000347612 CLIP1P30622 1438 aa24.82■■□□□ 1.56
GRIN2C-202ENST00000347612 MYT1Q01538 1121 aa24.8■■□□□ 1.56
GRIN2C-202ENST00000347612 CEP164Q9UPV0 1460 aa24.8■■□□□ 1.56
GRIN2C-202ENST00000347612 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
GRIN2C-202ENST00000347612 APLP2Q06481 763 aa24.77■■□□□ 1.56
GRIN2C-202ENST00000347612 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
GRIN2C-202ENST00000347612 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
GRIN2C-202ENST00000347612 VPS8Q8N3P4 1428 aa24.73■■□□□ 1.55
GRIN2C-202ENST00000347612 KIF21BO75037 1637 aa24.7■■□□□ 1.55
GRIN2C-202ENST00000347612 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
GRIN2C-202ENST00000347612 DHX57Q6P158 1386 aaKnown RBP24.49■■□□□ 1.51
GRIN2C-202ENST00000347612 KANK4Q5T7N3 995 aaPredicted RBP24.43■■□□□ 1.5
GRIN2C-202ENST00000347612 CFTRP13569 1480 aa24.43■■□□□ 1.5
GRIN2C-202ENST00000347612 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
GRIN2C-202ENST00000347612 SUPT16HQ9Y5B9 1047 aaKnown RBP24.4■■□□□ 1.5
GRIN2C-202ENST00000347612 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
GRIN2C-202ENST00000347612 NESP48681 1621 aa24.39■■□□□ 1.5
GRIN2C-202ENST00000347612 ARAP1Q96P48 1450 aa24.33■■□□□ 1.48
GRIN2C-202ENST00000347612 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
GRIN2C-202ENST00000347612 ITGAEP38570 1179 aa24.29■■□□□ 1.48
GRIN2C-202ENST00000347612 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
GRIN2C-202ENST00000347612 KCNH8Q96L42 1107 aa24.21■■□□□ 1.47
GRIN2C-202ENST00000347612 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.46
GRIN2C-202ENST00000347612 CUX1P39880 1505 aa24.2■■□□□ 1.46
GRIN2C-202ENST00000347612 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
GRIN2C-202ENST00000347612 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
GRIN2C-202ENST00000347612 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
GRIN2C-202ENST00000347612 TSHZ2Q9NRE2 1034 aa24.15■■□□□ 1.46
GRIN2C-202ENST00000347612 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.46
GRIN2C-202ENST00000347612 CUX2O14529 1486 aa24.07■■□□□ 1.44
GRIN2C-202ENST00000347612 BCANQ96GW7 911 aa24.05■■□□□ 1.44
GRIN2C-202ENST00000347612 RAB3GAP2Q9H2M9 1393 aa24.04■■□□□ 1.44
GRIN2C-202ENST00000347612 ARHGAP35Q9NRY4 1499 aa24.04■■□□□ 1.44
GRIN2C-202ENST00000347612 KIF27Q86VH2 1401 aa24.04■■□□□ 1.44
GRIN2C-202ENST00000347612 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms