RNA–Protein interactions for RNA: ENST00000345523.9

C19orf48-201, Transcript of chromosome 19 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf48, Length 1,503 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-201ENST00000345523 DIEXFQ68CQ4 756 aaKnown RBP23.69■■□□□ 1.38
C19orf48-201ENST00000345523 KANK4Q5T7N3 995 aaPredicted RBP23.67■■□□□ 1.38
C19orf48-201ENST00000345523 CCNB3Q8WWL7 1395 aa23.67■■□□□ 1.38
C19orf48-201ENST00000345523 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
C19orf48-201ENST00000345523 TIAM1Q13009 1591 aa23.65■■□□□ 1.38
C19orf48-201ENST00000345523 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.37not detected■■■■□ 23.4
C19orf48-201ENST00000345523 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
C19orf48-201ENST00000345523 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
C19orf48-201ENST00000345523 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
C19orf48-201ENST00000345523 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
C19orf48-201ENST00000345523 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
C19orf48-201ENST00000345523 DHX57Q6P158 1386 aaKnown RBP23.54■■□□□ 1.36
C19orf48-201ENST00000345523 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
C19orf48-201ENST00000345523 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
C19orf48-201ENST00000345523 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
C19orf48-201ENST00000345523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.51■■□□□ 1.35
C19orf48-201ENST00000345523 CENPBP07199 599 aaPredicted RBP23.51■■□□□ 1.35
C19orf48-201ENST00000345523 CFAP43Q8NDM7 1665 aa23.5■■□□□ 1.35
C19orf48-201ENST00000345523 CTTNBP2Q8WZ74 1663 aa23.48■■□□□ 1.35
C19orf48-201ENST00000345523 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
C19orf48-201ENST00000345523 PCF11O94913 1555 aaKnown RBP23.41■■□□□ 1.34
C19orf48-201ENST00000345523 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
C19orf48-201ENST00000345523 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
C19orf48-201ENST00000345523 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
C19orf48-201ENST00000345523 ACIN1Q9UKV3 1341 aaKnown RBP23.36■■□□□ 1.33
C19orf48-201ENST00000345523 FHOD3Q2V2M9 1422 aa23.36■■□□□ 1.33
C19orf48-201ENST00000345523 SETD5Q9C0A6 1442 aa23.36■■□□□ 1.33
C19orf48-201ENST00000345523 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
C19orf48-201ENST00000345523 SAMD9Q5K651 1589 aa23.35■■□□□ 1.33
C19orf48-201ENST00000345523 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
C19orf48-201ENST00000345523 PHLDB1Q86UU1 1377 aa23.33■■□□□ 1.32
C19orf48-201ENST00000345523 TIMELESSQ9UNS1 1208 aa23.32■■□□□ 1.32
C19orf48-201ENST00000345523 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
C19orf48-201ENST00000345523 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
C19orf48-201ENST00000345523 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
C19orf48-201ENST00000345523 P3H3Q8IVL6 736 aa23.25■■□□□ 1.31
C19orf48-201ENST00000345523 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
C19orf48-201ENST00000345523 CCDC18Q5T9S5 1454 aa23.23■■□□□ 1.31
C19orf48-201ENST00000345523 MTUS2Q5JR59 1369 aa23.22■■□□□ 1.31
C19orf48-201ENST00000345523 ATP1B4Q9UN42 357 aaPredicted RBP23.21■■□□□ 1.31
C19orf48-201ENST00000345523 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
C19orf48-201ENST00000345523 FAM50AQ14320 339 aaKnown RBP23.19■■□□□ 1.3
C19orf48-201ENST00000345523 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
C19orf48-201ENST00000345523 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
C19orf48-201ENST00000345523 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
C19orf48-201ENST00000345523 ITGAEP38570 1179 aa23.17■■□□□ 1.3
C19orf48-201ENST00000345523 NEUROD1Q13562 356 aa23.12■■□□□ 1.29
C19orf48-201ENST00000345523 PELP1Q8IZL8 1130 aaKnown RBP23.12■■□□□ 1.29
C19orf48-201ENST00000345523 MAPKBP1O60336 1514 aa23.12■■□□□ 1.29
C19orf48-201ENST00000345523 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
C19orf48-201ENST00000345523 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
C19orf48-201ENST00000345523 HECW1Q76N89 1606 aa23.09■■□□□ 1.29
C19orf48-201ENST00000345523 SUPT6HQ7KZ85 1726 aaKnown RBP23.09■■□□□ 1.29
C19orf48-201ENST00000345523 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
C19orf48-201ENST00000345523 UGGT2Q9NYU1 1516 aa23.07■■□□□ 1.28
C19orf48-201ENST00000345523 MIER1Q8N108 512 aa23.07■■□□□ 1.28
C19orf48-201ENST00000345523 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
C19orf48-201ENST00000345523 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
C19orf48-201ENST00000345523 ARHGEF11O15085 1522 aa23.05■■□□□ 1.28
C19orf48-201ENST00000345523 KIAA0586Q9BVV6 1533 aa23.01■■□□□ 1.27
C19orf48-201ENST00000345523 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
C19orf48-201ENST00000345523 MIA2Q96PC5 1412 aa23■■□□□ 1.27
C19orf48-201ENST00000345523 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
C19orf48-201ENST00000345523 AKNAQ7Z591 1439 aa23■■□□□ 1.27
C19orf48-201ENST00000345523 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
C19orf48-201ENST00000345523 EPRSP07814 1512 aaKnown RBP22.96■■□□□ 1.27
C19orf48-201ENST00000345523 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
C19orf48-201ENST00000345523 CHD1O14646 1710 aa22.93■■□□□ 1.26
C19orf48-201ENST00000345523 PTPN23Q9H3S7 1636 aa22.91■■□□□ 1.26
C19orf48-201ENST00000345523 GTF3C3Q9Y5Q9 886 aa22.91■■□□□ 1.26
C19orf48-201ENST00000345523 LRRIQ1Q96JM4 1722 aa22.9■■□□□ 1.26
C19orf48-201ENST00000345523 CDK11AQ9UQ88 783 aaPredicted RBP22.89■■□□□ 1.26
C19orf48-201ENST00000345523 NAIPQ13075 1403 aa22.89■■□□□ 1.25
C19orf48-201ENST00000345523 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
C19orf48-201ENST00000345523 FBLN2P98095 1184 aa22.87■■□□□ 1.25
C19orf48-201ENST00000345523 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
C19orf48-201ENST00000345523 NUP160Q12769 1436 aa22.85■■□□□ 1.25
C19orf48-201ENST00000345523 KIAA0556O60303 1618 aa22.84■■□□□ 1.25
C19orf48-201ENST00000345523 PTPRKQ15262 1439 aa22.83■■□□□ 1.25
C19orf48-201ENST00000345523 TONSLQ96HA7 1378 aa22.82■■□□□ 1.24
C19orf48-201ENST00000345523 MAGI3Q5TCQ9 1506 aa22.82■■□□□ 1.24
C19orf48-201ENST00000345523 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
C19orf48-201ENST00000345523 ROCK1Q13464 1354 aa22.79■■□□□ 1.24
C19orf48-201ENST00000345523 YTHDC1Q96MU7 727 aaKnown RBP22.78■■□□□ 1.24
C19orf48-201ENST00000345523 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
C19orf48-201ENST00000345523 GCC2Q8IWJ2 1684 aa22.77■■□□□ 1.24
C19orf48-201ENST00000345523 CARMIL2Q6F5E8 1435 aa22.76■■□□□ 1.23
C19orf48-201ENST00000345523 RAPGEF6Q8TEU7 1601 aa22.74■■□□□ 1.23
C19orf48-201ENST00000345523 CDK13Q14004 1512 aaKnown RBP22.71■■□□□ 1.23
C19orf48-201ENST00000345523 NUP153P49790 1475 aaKnown RBP22.7■■□□□ 1.22
C19orf48-201ENST00000345523 TROQ12816 1431 aaPredicted RBP22.67■■□□□ 1.22
C19orf48-201ENST00000345523 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
C19orf48-201ENST00000345523 DAPK1P53355 1430 aa22.64■■□□□ 1.21
C19orf48-201ENST00000345523 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
C19orf48-201ENST00000345523 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
C19orf48-201ENST00000345523 CCER2I3L3R5 266 aa22.62■■□□□ 1.21
C19orf48-201ENST00000345523 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
C19orf48-201ENST00000345523 ITSN2Q9NZM3 1697 aa22.59■■□□□ 1.21
C19orf48-201ENST00000345523 RRP7BPQ9NSQ0 103 aa22.58■■□□□ 1.21
C19orf48-201ENST00000345523 ADCY10Q96PN6 1610 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms