RNA–Protein interactions for RNA: ENST00000343327.6

PTBP3-203, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2 BASIC

Gene PTBP3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-203ENST00000343327 CUL7Q14999 1698 aa12.82□□□□□ -0.36
PTBP3-203ENST00000343327 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
PTBP3-203ENST00000343327 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
PTBP3-203ENST00000343327 CENPBP07199 599 aaPredicted RBP12.78□□□□□ -0.36
PTBP3-203ENST00000343327 NUP160Q12769 1436 aa12.77□□□□□ -0.36
PTBP3-203ENST00000343327 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
PTBP3-203ENST00000343327 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
PTBP3-203ENST00000343327 EEA1Q15075 1411 aa12.7□□□□□ -0.38
PTBP3-203ENST00000343327 IGF1RP08069 1367 aa12.69□□□□□ -0.38
PTBP3-203ENST00000343327 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
PTBP3-203ENST00000343327 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
PTBP3-203ENST00000343327 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
PTBP3-203ENST00000343327 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
PTBP3-203ENST00000343327 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
PTBP3-203ENST00000343327 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
PTBP3-203ENST00000343327 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
PTBP3-203ENST00000343327 KIAA0586Q9BVV6 1533 aa12.63□□□□□ -0.39
PTBP3-203ENST00000343327 MIER1Q8N108 512 aa12.61□□□□□ -0.39
PTBP3-203ENST00000343327 CARMIL1Q5VZK9 1371 aa12.6□□□□□ -0.39
PTBP3-203ENST00000343327 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
PTBP3-203ENST00000343327 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.39
PTBP3-203ENST00000343327 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
PTBP3-203ENST00000343327 ARAP1Q96P48 1450 aa12.56□□□□□ -0.4
PTBP3-203ENST00000343327 MYT1Q01538 1121 aa12.56□□□□□ -0.4
PTBP3-203ENST00000343327 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
PTBP3-203ENST00000343327 UGGT2Q9NYU1 1516 aa12.54□□□□□ -0.4
PTBP3-203ENST00000343327 FBLN2P98095 1184 aa12.53□□□□□ -0.4
PTBP3-203ENST00000343327 IQGAP2Q13576 1575 aa12.52□□□□□ -0.4
PTBP3-203ENST00000343327 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
PTBP3-203ENST00000343327 KIF21BO75037 1637 aa12.5□□□□□ -0.41
PTBP3-203ENST00000343327 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
PTBP3-203ENST00000343327 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
PTBP3-203ENST00000343327 GOLGA3Q08378 1498 aa12.47□□□□□ -0.41
PTBP3-203ENST00000343327 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
PTBP3-203ENST00000343327 JPH4Q96JJ6 628 aa12.47□□□□□ -0.41
PTBP3-203ENST00000343327 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.41
PTBP3-203ENST00000343327 RANGAP1P46060 587 aaPredicted RBP12.45□□□□□ -0.42
PTBP3-203ENST00000343327 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
PTBP3-203ENST00000343327 TNIKQ9UKE5 1360 aa12.41□□□□□ -0.42
PTBP3-203ENST00000343327 KIAA0556O60303 1618 aa12.4□□□□□ -0.42
PTBP3-203ENST00000343327 MAPKBP1O60336 1514 aa12.4□□□□□ -0.42
PTBP3-203ENST00000343327 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
PTBP3-203ENST00000343327 ERCC6L2Q5T890 1561 aa12.4□□□□□ -0.42
PTBP3-203ENST00000343327 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
PTBP3-203ENST00000343327 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
PTBP3-203ENST00000343327 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
PTBP3-203ENST00000343327 PTPRGP23470 1445 aa12.34□□□□□ -0.43
PTBP3-203ENST00000343327 ABCC2Q92887 1545 aa12.33□□□□□ -0.43
PTBP3-203ENST00000343327 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
PTBP3-203ENST00000343327 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.44
PTBP3-203ENST00000343327 UACAQ9BZF9 1416 aa12.31□□□□□ -0.44
PTBP3-203ENST00000343327 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
PTBP3-203ENST00000343327 ABCA8O94911 1581 aa12.31□□□□□ -0.44
PTBP3-203ENST00000343327 SUPT16HQ9Y5B9 1047 aaKnown RBP12.3□□□□□ -0.44
PTBP3-203ENST00000343327 GLI2P10070 1586 aa12.3□□□□□ -0.44
PTBP3-203ENST00000343327 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
PTBP3-203ENST00000343327 BCANQ96GW7 911 aa12.26□□□□□ -0.45
PTBP3-203ENST00000343327 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
PTBP3-203ENST00000343327 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
PTBP3-203ENST00000343327 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
PTBP3-203ENST00000343327 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTBP3-203ENST00000343327 DIP2BQ9P265 1576 aa12.22□□□□□ -0.45
PTBP3-203ENST00000343327 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
PTBP3-203ENST00000343327 KIF13AQ9H1H9 1805 aa12.2□□□□□ -0.46
PTBP3-203ENST00000343327 APLP2Q06481 763 aa12.2□□□□□ -0.46
PTBP3-203ENST00000343327 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
PTBP3-203ENST00000343327 FMN1Q68DA7 1419 aa12.18□□□□□ -0.46
PTBP3-203ENST00000343327 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
PTBP3-203ENST00000343327 ASXL2Q76L83 1435 aa12.15□□□□□ -0.46
PTBP3-203ENST00000343327 CFAP43Q8NDM7 1665 aa12.15□□□□□ -0.46
PTBP3-203ENST00000343327 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.46
PTBP3-203ENST00000343327 ITGAEP38570 1179 aa12.15□□□□□ -0.46
PTBP3-203ENST00000343327 ANP32EQ9BTT0 268 aa12.14□□□□□ -0.47
PTBP3-203ENST00000343327 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
PTBP3-203ENST00000343327 EPRSP07814 1512 aaKnown RBP12.14□□□□□ -0.47
PTBP3-203ENST00000343327 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
PTBP3-203ENST00000343327 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
PTBP3-203ENST00000343327 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
PTBP3-203ENST00000343327 TEX14Q8IWB6 1497 aa12.12□□□□□ -0.47
PTBP3-203ENST00000343327 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
PTBP3-203ENST00000343327 ATP10BO94823 1461 aa12.11□□□□□ -0.47
PTBP3-203ENST00000343327 NUP153P49790 1475 aaKnown RBP12.11□□□□□ -0.47
PTBP3-203ENST00000343327 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
PTBP3-203ENST00000343327 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
PTBP3-203ENST00000343327 ARAP3Q8WWN8 1544 aa12.09□□□□□ -0.47
PTBP3-203ENST00000343327 FKBP8Q14318 412 aa12.08□□□□□ -0.48
PTBP3-203ENST00000343327 CASKIN1Q8WXD9 1431 aa12.08□□□□□ -0.48
PTBP3-203ENST00000343327 CLIP1P30622 1438 aa12.07□□□□□ -0.48
PTBP3-203ENST00000343327 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
PTBP3-203ENST00000343327 PPRC1Q5VV67 1664 aaKnown RBP12.07□□□□□ -0.48
PTBP3-203ENST00000343327 FHOD3Q2V2M9 1422 aa12.06□□□□□ -0.48
PTBP3-203ENST00000343327 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
PTBP3-203ENST00000343327 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
PTBP3-203ENST00000343327 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
PTBP3-203ENST00000343327 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
PTBP3-203ENST00000343327 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
PTBP3-203ENST00000343327 NEO1Q92859 1461 aa12.03□□□□□ -0.48
PTBP3-203ENST00000343327 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.48
PTBP3-203ENST00000343327 FAM69CQ0P6D2 419 aa12.02□□□□□ -0.49
PTBP3-203ENST00000343327 TRIM52Q96A61 297 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms