RNA–Protein interactions for RNA: ENST00000342645.7

HIPK2-201, Transcript of homeodomain interacting protein kinase 2, humanhuman

TSL 5 BASIC

Gene HIPK2, Length 2,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-201ENST00000342645 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
HIPK2-201ENST00000342645 SETD5Q9C0A6 1442 aa12.84□□□□□ -0.35
HIPK2-201ENST00000342645 CUX1P39880 1505 aa12.82□□□□□ -0.36
HIPK2-201ENST00000342645 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
HIPK2-201ENST00000342645 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
HIPK2-201ENST00000342645 PPP1R15AO75807 674 aaPredicted RBP12.82□□□□□ -0.36
HIPK2-201ENST00000342645 CFTRP13569 1480 aa12.81□□□□□ -0.36
HIPK2-201ENST00000342645 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
HIPK2-201ENST00000342645 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
HIPK2-201ENST00000342645 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
HIPK2-201ENST00000342645 ANP32CO43423 234 aa12.78□□□□□ -0.36
HIPK2-201ENST00000342645 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
HIPK2-201ENST00000342645 CCER2I3L3R5 266 aa12.78□□□□□ -0.36
HIPK2-201ENST00000342645 PHLDB1Q86UU1 1377 aa12.75□□□□□ -0.37
HIPK2-201ENST00000342645 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
HIPK2-201ENST00000342645 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
HIPK2-201ENST00000342645 LRRC9Q6ZRR7 1453 aa12.74□□□□□ -0.37
HIPK2-201ENST00000342645 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
HIPK2-201ENST00000342645 IGF1RP08069 1367 aa12.7□□□□□ -0.38
HIPK2-201ENST00000342645 CADPSQ9ULU8 1353 aa12.68□□□□□ -0.38
HIPK2-201ENST00000342645 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
HIPK2-201ENST00000342645 CARMIL1Q5VZK9 1371 aa12.66□□□□□ -0.38
HIPK2-201ENST00000342645 MSH5O43196 834 aa12.66□□□□□ -0.38
HIPK2-201ENST00000342645 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
HIPK2-201ENST00000342645 TONSLQ96HA7 1378 aa12.66□□□□□ -0.38
HIPK2-201ENST00000342645 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.394e-6■■□□□ 11.5
HIPK2-201ENST00000342645 LAMC3Q9Y6N6 1575 aa12.63□□□□□ -0.39
HIPK2-201ENST00000342645 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
HIPK2-201ENST00000342645 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
HIPK2-201ENST00000342645 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
HIPK2-201ENST00000342645 PCF11O94913 1555 aaKnown RBP12.62□□□□□ -0.39
HIPK2-201ENST00000342645 ERICH6Q7L0X2 663 aa12.6□□□□□ -0.39
HIPK2-201ENST00000342645 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
HIPK2-201ENST00000342645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
HIPK2-201ENST00000342645 FHOD3Q2V2M9 1422 aa12.57□□□□□ -0.4
HIPK2-201ENST00000342645 CCDC18Q5T9S5 1454 aa12.56□□□□□ -0.4
HIPK2-201ENST00000342645 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
HIPK2-201ENST00000342645 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
HIPK2-201ENST00000342645 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
HIPK2-201ENST00000342645 UACAQ9BZF9 1416 aa12.54□□□□□ -0.4
HIPK2-201ENST00000342645 FANCD2Q9BXW9 1451 aa12.52□□□□□ -0.4
HIPK2-201ENST00000342645 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.4
HIPK2-201ENST00000342645 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
HIPK2-201ENST00000342645 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
HIPK2-201ENST00000342645 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
HIPK2-201ENST00000342645 PTPRKQ15262 1439 aa12.5□□□□□ -0.41
HIPK2-201ENST00000342645 ERICH6BQ5W0A0 696 aa12.5□□□□□ -0.41
HIPK2-201ENST00000342645 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
HIPK2-201ENST00000342645 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
HIPK2-201ENST00000342645 PTPN23Q9H3S7 1636 aa12.5□□□□□ -0.41
HIPK2-201ENST00000342645 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
HIPK2-201ENST00000342645 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■■■■ 44.2
HIPK2-201ENST00000342645 EFCAB5A4FU69 1503 aa12.48□□□□□ -0.41
HIPK2-201ENST00000342645 NAIPQ13075 1403 aa12.47□□□□□ -0.41
HIPK2-201ENST00000342645 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
HIPK2-201ENST00000342645 KDM5BQ9UGL1 1544 aa12.46□□□□□ -0.41
HIPK2-201ENST00000342645 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.426e-7■■■■■ 37.2
HIPK2-201ENST00000342645 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
HIPK2-201ENST00000342645 FAM9BQ8IZU0 186 aa12.45□□□□□ -0.42
HIPK2-201ENST00000342645 NESP48681 1621 aa12.45□□□□□ -0.42
HIPK2-201ENST00000342645 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
HIPK2-201ENST00000342645 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
HIPK2-201ENST00000342645 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
HIPK2-201ENST00000342645 RRP7BPQ9NSQ0 103 aa12.43□□□□□ -0.42
HIPK2-201ENST00000342645 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
HIPK2-201ENST00000342645 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
HIPK2-201ENST00000342645 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
HIPK2-201ENST00000342645 MYOM3Q5VTT5 1437 aa12.42□□□□□ -0.42
HIPK2-201ENST00000342645 NCOA2Q15596 1464 aa12.42□□□□□ -0.42
HIPK2-201ENST00000342645 RAD54L2Q9Y4B4 1467 aa12.42□□□□□ -0.42
HIPK2-201ENST00000342645 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
HIPK2-201ENST00000342645 CHIC2Q9UKJ5 165 aa12.41□□□□□ -0.42
HIPK2-201ENST00000342645 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
HIPK2-201ENST00000342645 CTTNBP2Q8WZ74 1663 aa12.41□□□□□ -0.42
HIPK2-201ENST00000342645 KIF21AQ7Z4S6 1674 aa12.4□□□□□ -0.42
HIPK2-201ENST00000342645 ABCA10Q8WWZ4 1543 aa12.39□□□□□ -0.43
HIPK2-201ENST00000342645 DEKP35659 375 aaKnown RBP12.39□□□□□ -0.43
HIPK2-201ENST00000342645 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
HIPK2-201ENST00000342645 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
HIPK2-201ENST00000342645 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
HIPK2-201ENST00000342645 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
HIPK2-201ENST00000342645 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
HIPK2-201ENST00000342645 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
HIPK2-201ENST00000342645 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
HIPK2-201ENST00000342645 CUL7Q14999 1698 aa12.36□□□□□ -0.43
HIPK2-201ENST00000342645 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
HIPK2-201ENST00000342645 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
HIPK2-201ENST00000342645 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
HIPK2-201ENST00000342645 AEBP2Q6ZN18 517 aaPredicted RBP12.35□□□□□ -0.43
HIPK2-201ENST00000342645 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
HIPK2-201ENST00000342645 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
HIPK2-201ENST00000342645 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
HIPK2-201ENST00000342645 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
HIPK2-201ENST00000342645 NBR1Q14596 966 aa12.34□□□□□ -0.43
HIPK2-201ENST00000342645 FOXD1Q16676 465 aa12.34□□□□□ -0.43
HIPK2-201ENST00000342645 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
HIPK2-201ENST00000342645 GRIN2BQ13224 1484 aa12.33□□□□□ -0.44
HIPK2-201ENST00000342645 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
HIPK2-201ENST00000342645 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
HIPK2-201ENST00000342645 GCC2Q8IWJ2 1684 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms