RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 DHX57Q6P158 1386 aaKnown RBP23.16■■□□□ 1.3
PDE8B-204ENST00000342343 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
PDE8B-204ENST00000342343 URB2Q14146 1524 aaKnown RBP23.14■■□□□ 1.3
PDE8B-204ENST00000342343 MIER1Q8N108 512 aa23.13■■□□□ 1.29
PDE8B-204ENST00000342343 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
PDE8B-204ENST00000342343 TIAM1Q13009 1591 aa23.12■■□□□ 1.29
PDE8B-204ENST00000342343 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
PDE8B-204ENST00000342343 FHOD3Q2V2M9 1422 aa23.09■■□□□ 1.29
PDE8B-204ENST00000342343 TDRD9Q8NDG6 1382 aaKnown RBP23.08■■□□□ 1.29
PDE8B-204ENST00000342343 LRRC9Q6ZRR7 1453 aa23.05■■□□□ 1.28
PDE8B-204ENST00000342343 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
PDE8B-204ENST00000342343 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
PDE8B-204ENST00000342343 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
PDE8B-204ENST00000342343 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
PDE8B-204ENST00000342343 CUL7Q14999 1698 aa23■■□□□ 1.27
PDE8B-204ENST00000342343 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
PDE8B-204ENST00000342343 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
PDE8B-204ENST00000342343 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
PDE8B-204ENST00000342343 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
PDE8B-204ENST00000342343 FAM50AQ14320 339 aaKnown RBP22.95■■□□□ 1.27
PDE8B-204ENST00000342343 CTTNBP2Q8WZ74 1663 aa22.94■■□□□ 1.26
PDE8B-204ENST00000342343 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
PDE8B-204ENST00000342343 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
PDE8B-204ENST00000342343 CFAP43Q8NDM7 1665 aa22.93■■□□□ 1.26
PDE8B-204ENST00000342343 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
PDE8B-204ENST00000342343 EFCAB5A4FU69 1503 aa22.9■■□□□ 1.26
PDE8B-204ENST00000342343 CASKIN1Q8WXD9 1431 aa22.88■■□□□ 1.25
PDE8B-204ENST00000342343 FYCO1Q9BQS8 1478 aa22.87■■□□□ 1.25
PDE8B-204ENST00000342343 SETD5Q9C0A6 1442 aa22.82■■□□□ 1.24
PDE8B-204ENST00000342343 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.24
PDE8B-204ENST00000342343 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
PDE8B-204ENST00000342343 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
PDE8B-204ENST00000342343 FMN1Q68DA7 1419 aa22.8■■□□□ 1.24
PDE8B-204ENST00000342343 MAPKBP1O60336 1514 aa22.8■■□□□ 1.24
PDE8B-204ENST00000342343 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
PDE8B-204ENST00000342343 LRRIQ1Q96JM4 1722 aa22.74■■□□□ 1.23
PDE8B-204ENST00000342343 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
PDE8B-204ENST00000342343 MTUS2Q5JR59 1369 aa22.72■■□□□ 1.23
PDE8B-204ENST00000342343 FGD6Q6ZV73 1430 aa22.68■■□□□ 1.22
PDE8B-204ENST00000342343 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
PDE8B-204ENST00000342343 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
PDE8B-204ENST00000342343 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.22
PDE8B-204ENST00000342343 PTPRKQ15262 1439 aa22.63■■□□□ 1.21
PDE8B-204ENST00000342343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.21
PDE8B-204ENST00000342343 SUPT16HQ9Y5B9 1047 aaKnown RBP22.61■■□□□ 1.21
PDE8B-204ENST00000342343 NCOA2Q15596 1464 aa22.61■■□□□ 1.21
PDE8B-204ENST00000342343 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
PDE8B-204ENST00000342343 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
PDE8B-204ENST00000342343 MAGI3Q5TCQ9 1506 aa22.58■■□□□ 1.21
PDE8B-204ENST00000342343 ADAMTS12P58397 1594 aa22.58■■□□□ 1.2
PDE8B-204ENST00000342343 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
PDE8B-204ENST00000342343 MYOM3Q5VTT5 1437 aa22.55■■□□□ 1.2
PDE8B-204ENST00000342343 SUPT6HQ7KZ85 1726 aaKnown RBP22.52■■□□□ 1.19
PDE8B-204ENST00000342343 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
PDE8B-204ENST00000342343 EHBP1L1Q8N3D4 1523 aa22.5■■□□□ 1.19
PDE8B-204ENST00000342343 CCDC18Q5T9S5 1454 aa22.49■■□□□ 1.19
PDE8B-204ENST00000342343 CDK13Q14004 1512 aaKnown RBP22.48■■□□□ 1.19
PDE8B-204ENST00000342343 UGGT2Q9NYU1 1516 aa22.48■■□□□ 1.19
PDE8B-204ENST00000342343 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
PDE8B-204ENST00000342343 HFM1A2PYH4 1435 aa22.47■■□□□ 1.19
PDE8B-204ENST00000342343 CHIC2Q9UKJ5 165 aa22.46■■□□□ 1.19
PDE8B-204ENST00000342343 EPRSP07814 1512 aaKnown RBP22.46■■□□□ 1.19
PDE8B-204ENST00000342343 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.19
PDE8B-204ENST00000342343 PTPN23Q9H3S7 1636 aa22.45■■□□□ 1.18
PDE8B-204ENST00000342343 NAIPQ13075 1403 aa22.45■■□□□ 1.18
PDE8B-204ENST00000342343 WDR62O43379 1518 aa22.45■■□□□ 1.18
PDE8B-204ENST00000342343 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
PDE8B-204ENST00000342343 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
PDE8B-204ENST00000342343 HECW1Q76N89 1606 aa22.43■■□□□ 1.18
PDE8B-204ENST00000342343 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
PDE8B-204ENST00000342343 UACAQ9BZF9 1416 aa22.39■■□□□ 1.17
PDE8B-204ENST00000342343 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
PDE8B-204ENST00000342343 TSHZ2Q9NRE2 1034 aa22.38■■□□□ 1.17
PDE8B-204ENST00000342343 DDX10Q13206 875 aaKnown RBP22.37■■□□□ 1.17
PDE8B-204ENST00000342343 TIMELESSQ9UNS1 1208 aa22.37■■□□□ 1.17
PDE8B-204ENST00000342343 EIF4G3O43432 1585 aaKnown RBP22.36■■□□□ 1.17
PDE8B-204ENST00000342343 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
PDE8B-204ENST00000342343 ERCC6Q03468 1493 aa22.36■■□□□ 1.17
PDE8B-204ENST00000342343 KIAA0586Q9BVV6 1533 aa22.35■■□□□ 1.17
PDE8B-204ENST00000342343 GRIN2AQ12879 1464 aa22.33■■□□□ 1.17
PDE8B-204ENST00000342343 TCOF1Q13428 1488 aaKnown RBP22.33■■□□□ 1.16
PDE8B-204ENST00000342343 TONSLQ96HA7 1378 aa22.32■■□□□ 1.16
PDE8B-204ENST00000342343 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
PDE8B-204ENST00000342343 FBLN2P98095 1184 aa22.31■■□□□ 1.16
PDE8B-204ENST00000342343 KDM6BO15054 1643 aa22.29■■□□□ 1.16
PDE8B-204ENST00000342343 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
PDE8B-204ENST00000342343 TRIM52Q96A61 297 aa22.27■■□□□ 1.16
PDE8B-204ENST00000342343 NUP153P49790 1475 aaKnown RBP22.27■■□□□ 1.16
PDE8B-204ENST00000342343 ZNF644Q9H582 1327 aaPredicted RBP22.27■■□□□ 1.16
PDE8B-204ENST00000342343 DENND4BO75064 1496 aaPredicted RBP22.24■■□□□ 1.15
PDE8B-204ENST00000342343 MIA2Q96PC5 1412 aa22.24■■□□□ 1.15
PDE8B-204ENST00000342343 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
PDE8B-204ENST00000342343 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
PDE8B-204ENST00000342343 FOXD1Q16676 465 aa22.21■■□□□ 1.15
PDE8B-204ENST00000342343 RAPGEF6Q8TEU7 1601 aa22.21■■□□□ 1.15
PDE8B-204ENST00000342343 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.15
PDE8B-204ENST00000342343 KDM5BQ9UGL1 1544 aa22.18■■□□□ 1.14
PDE8B-204ENST00000342343 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
PDE8B-204ENST00000342343 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
PDE8B-204ENST00000342343 PRG4Q92954 1404 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms