RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
PDE8B-204ENST00000342343 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
PDE8B-204ENST00000342343 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
PDE8B-204ENST00000342343 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
PDE8B-204ENST00000342343 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
PDE8B-204ENST00000342343 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
PDE8B-204ENST00000342343 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
PDE8B-204ENST00000342343 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
PDE8B-204ENST00000342343 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
PDE8B-204ENST00000342343 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
PDE8B-204ENST00000342343 ABCC9O60706 1549 aa26.34■■□□□ 1.81
PDE8B-204ENST00000342343 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
PDE8B-204ENST00000342343 NACADO15069 1562 aa26.03■■□□□ 1.76
PDE8B-204ENST00000342343 HRCP23327 699 aa25.98■■□□□ 1.75
PDE8B-204ENST00000342343 CECR2Q9BXF3 1484 aa25.83■■□□□ 1.73
PDE8B-204ENST00000342343 LOC105371045A0A1W2PR82 267 aa25.81■■□□□ 1.72
PDE8B-204ENST00000342343 RB1CC1Q8TDY2 1594 aa25.76■■□□□ 1.71
PDE8B-204ENST00000342343 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
PDE8B-204ENST00000342343 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
PDE8B-204ENST00000342343 WIZO95785 1651 aa25.55■■□□□ 1.68
PDE8B-204ENST00000342343 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
PDE8B-204ENST00000342343 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.65
PDE8B-204ENST00000342343 UNC13AQ9UPW8 1703 aa25.35■■□□□ 1.65
PDE8B-204ENST00000342343 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
PDE8B-204ENST00000342343 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
PDE8B-204ENST00000342343 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
PDE8B-204ENST00000342343 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
PDE8B-204ENST00000342343 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
PDE8B-204ENST00000342343 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
PDE8B-204ENST00000342343 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
PDE8B-204ENST00000342343 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
PDE8B-204ENST00000342343 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
PDE8B-204ENST00000342343 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
PDE8B-204ENST00000342343 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
PDE8B-204ENST00000342343 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
PDE8B-204ENST00000342343 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
PDE8B-204ENST00000342343 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
PDE8B-204ENST00000342343 SOGA1O94964 1423 aa24.64■■□□□ 1.54
PDE8B-204ENST00000342343 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
PDE8B-204ENST00000342343 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
PDE8B-204ENST00000342343 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
PDE8B-204ENST00000342343 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
PDE8B-204ENST00000342343 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
PDE8B-204ENST00000342343 CSRNP3Q8WYN3 585 aa24.44■■□□□ 1.5
PDE8B-204ENST00000342343 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
PDE8B-204ENST00000342343 CEP162Q5TB80 1403 aa24.37■■□□□ 1.49
PDE8B-204ENST00000342343 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
PDE8B-204ENST00000342343 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
PDE8B-204ENST00000342343 EEA1Q15075 1411 aa24.33■■□□□ 1.48
PDE8B-204ENST00000342343 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
PDE8B-204ENST00000342343 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
PDE8B-204ENST00000342343 GOLGA3Q08378 1498 aa24.21■■□□□ 1.47
PDE8B-204ENST00000342343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
PDE8B-204ENST00000342343 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
PDE8B-204ENST00000342343 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
PDE8B-204ENST00000342343 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
PDE8B-204ENST00000342343 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
PDE8B-204ENST00000342343 KIF21BO75037 1637 aa24.05■■□□□ 1.44
PDE8B-204ENST00000342343 RAPGEF2Q9Y4G8 1499 aa24.03■■□□□ 1.44
PDE8B-204ENST00000342343 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
PDE8B-204ENST00000342343 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
PDE8B-204ENST00000342343 CLIP1P30622 1438 aa23.96■■□□□ 1.43
PDE8B-204ENST00000342343 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.43
PDE8B-204ENST00000342343 CUX1P39880 1505 aa23.91■■□□□ 1.42
PDE8B-204ENST00000342343 CFTRP13569 1480 aa23.88■■□□□ 1.41
PDE8B-204ENST00000342343 ACIN1Q9UKV3 1341 aaKnown RBP23.88■■□□□ 1.41
PDE8B-204ENST00000342343 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
PDE8B-204ENST00000342343 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
PDE8B-204ENST00000342343 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
PDE8B-204ENST00000342343 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
PDE8B-204ENST00000342343 HNRNPUL2Q1KMD3 747 aaKnown RBP23.71■■□□□ 1.39
PDE8B-204ENST00000342343 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
PDE8B-204ENST00000342343 CENPBP07199 599 aaPredicted RBP23.69■■□□□ 1.38
PDE8B-204ENST00000342343 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
PDE8B-204ENST00000342343 APLP2Q06481 763 aa23.69■■□□□ 1.38
PDE8B-204ENST00000342343 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
PDE8B-204ENST00000342343 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
PDE8B-204ENST00000342343 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
PDE8B-204ENST00000342343 GTF3C3Q9Y5Q9 886 aa23.62■■□□□ 1.37
PDE8B-204ENST00000342343 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
PDE8B-204ENST00000342343 CUX2O14529 1486 aa23.57■■□□□ 1.36
PDE8B-204ENST00000342343 KANK4Q5T7N3 995 aaPredicted RBP23.53■■□□□ 1.36
PDE8B-204ENST00000342343 IGF1RP08069 1367 aa23.52■■□□□ 1.36
PDE8B-204ENST00000342343 FGD5Q6ZNL6 1462 aa23.52■■□□□ 1.36
PDE8B-204ENST00000342343 ARHGAP35Q9NRY4 1499 aa23.46■■□□□ 1.35
PDE8B-204ENST00000342343 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
PDE8B-204ENST00000342343 NESP48681 1621 aa23.43■■□□□ 1.34
PDE8B-204ENST00000342343 MYT1Q01538 1121 aa23.42■■□□□ 1.34
PDE8B-204ENST00000342343 ZNF316A6NFI3 1004 aaPredicted RBP23.41■■□□□ 1.34
PDE8B-204ENST00000342343 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
PDE8B-204ENST00000342343 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
PDE8B-204ENST00000342343 DNAJC5BQ9UF47 199 aa23.32■■□□□ 1.32
PDE8B-204ENST00000342343 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
PDE8B-204ENST00000342343 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
PDE8B-204ENST00000342343 POLA1P09884 1462 aaPredicted RBP23.26■■□□□ 1.31
PDE8B-204ENST00000342343 P3H3Q8IVL6 736 aa23.26■■□□□ 1.31
PDE8B-204ENST00000342343 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
PDE8B-204ENST00000342343 ITGAEP38570 1179 aa23.2■■□□□ 1.3
PDE8B-204ENST00000342343 ABCA10Q8WWZ4 1543 aa23.19■■□□□ 1.3
PDE8B-204ENST00000342343 YTHDC1Q96MU7 727 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms