RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 MAPKBP1O60336 1514 aa29.83■■■□□ 2.37
CLPB-202ENST00000340729 TIAM1Q13009 1591 aa29.82■■■□□ 2.36
CLPB-202ENST00000340729 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
CLPB-202ENST00000340729 KIF21AQ7Z4S6 1674 aa29.79■■■□□ 2.36
CLPB-202ENST00000340729 RAB3GAP2Q9H2M9 1393 aa29.78■■■□□ 2.36
CLPB-202ENST00000340729 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.35
CLPB-202ENST00000340729 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
CLPB-202ENST00000340729 IGF1RP08069 1367 aa29.76■■■□□ 2.35
CLPB-202ENST00000340729 SETD5Q9C0A6 1442 aa29.7■■■□□ 2.34
CLPB-202ENST00000340729 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.34
CLPB-202ENST00000340729 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
CLPB-202ENST00000340729 LRRC9Q6ZRR7 1453 aa29.66■■■□□ 2.34
CLPB-202ENST00000340729 PDS5BQ9NTI5 1447 aa29.66■■■□□ 2.34
CLPB-202ENST00000340729 CFAP43Q8NDM7 1665 aa29.63■■■□□ 2.33
CLPB-202ENST00000340729 CARMIL1Q5VZK9 1371 aa29.62■■■□□ 2.33
CLPB-202ENST00000340729 TIMELESSQ9UNS1 1208 aa29.62■■■□□ 2.33
CLPB-202ENST00000340729 TSHZ2Q9NRE2 1034 aa29.6■■■□□ 2.33
CLPB-202ENST00000340729 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
CLPB-202ENST00000340729 ITGAEP38570 1179 aa29.54■■■□□ 2.32
CLPB-202ENST00000340729 PHLDB1Q86UU1 1377 aa29.54■■■□□ 2.32
CLPB-202ENST00000340729 CUL7Q14999 1698 aa29.51■■■□□ 2.31
CLPB-202ENST00000340729 ABCA5Q8WWZ7 1642 aa29.5■■■□□ 2.31
CLPB-202ENST00000340729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.49■■■□□ 2.31
CLPB-202ENST00000340729 KCNH8Q96L42 1107 aa29.45■■■□□ 2.31
CLPB-202ENST00000340729 PCF11O94913 1555 aaKnown RBP29.45■■■□□ 2.3
CLPB-202ENST00000340729 PPP1R15AO75807 674 aaPredicted RBP29.43■■■□□ 2.3
CLPB-202ENST00000340729 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
CLPB-202ENST00000340729 CTTNBP2Q8WZ74 1663 aa29.39■■■□□ 2.29
CLPB-202ENST00000340729 CCER2I3L3R5 266 aa29.38■■■□□ 2.29
CLPB-202ENST00000340729 AQRO60306 1485 aaKnown RBP eCLIP29.38■■■□□ 2.291e-6■■■■■ 33.8
CLPB-202ENST00000340729 FYCO1Q9BQS8 1478 aa29.38■■■□□ 2.29
CLPB-202ENST00000340729 EFCAB5A4FU69 1503 aa29.37■■■□□ 2.29
CLPB-202ENST00000340729 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
CLPB-202ENST00000340729 DDX10Q13206 875 aaKnown RBP29.35■■■□□ 2.29
CLPB-202ENST00000340729 ANP32EQ9BTT0 268 aa29.35■■■□□ 2.29
CLPB-202ENST00000340729 SIN3AQ96ST3 1273 aa29.34■■■□□ 2.29
CLPB-202ENST00000340729 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
CLPB-202ENST00000340729 MRC2Q9UBG0 1479 aa29.32■■■□□ 2.28
CLPB-202ENST00000340729 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
CLPB-202ENST00000340729 CASKIN1Q8WXD9 1431 aa29.3■■■□□ 2.28
CLPB-202ENST00000340729 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
CLPB-202ENST00000340729 FKBP8Q14318 412 aa29.24■■■□□ 2.27
CLPB-202ENST00000340729 ANP32CO43423 234 aa29.19■■■□□ 2.26
CLPB-202ENST00000340729 WDR62O43379 1518 aa29.18■■■□□ 2.26
CLPB-202ENST00000340729 FHOD3Q2V2M9 1422 aa29.18■■■□□ 2.26
CLPB-202ENST00000340729 NEFLP07196 543 aa29.17■■■□□ 2.26
CLPB-202ENST00000340729 FGD6Q6ZV73 1430 aa29.17■■■□□ 2.26
CLPB-202ENST00000340729 HFM1A2PYH4 1435 aa29.14■■■□□ 2.26
CLPB-202ENST00000340729 UACAQ9BZF9 1416 aa29.13■■■□□ 2.25
CLPB-202ENST00000340729 FMN1Q68DA7 1419 aa29.13■■■□□ 2.25
CLPB-202ENST00000340729 CCDC18Q5T9S5 1454 aa29.12■■■□□ 2.25
CLPB-202ENST00000340729 BCANQ96GW7 911 aa29.11■■■□□ 2.25
CLPB-202ENST00000340729 P3H3Q8IVL6 736 aa29.1■■■□□ 2.25
CLPB-202ENST00000340729 TONSLQ96HA7 1378 aa29.1■■■□□ 2.25
CLPB-202ENST00000340729 PTPN23Q9H3S7 1636 aa29.09■■■□□ 2.25
CLPB-202ENST00000340729 SNAPC4Q5SXM2 1469 aa29.09■■■□□ 2.25
CLPB-202ENST00000340729 ADAMTS12P58397 1594 aa29.07■■■□□ 2.24
CLPB-202ENST00000340729 SAMD9Q5K651 1589 aa29.05■■■□□ 2.24
CLPB-202ENST00000340729 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
CLPB-202ENST00000340729 ZNF608Q9ULD9 1512 aaPredicted RBP29.03■■■□□ 2.24
CLPB-202ENST00000340729 IFT140Q96RY7 1462 aa29.02■■■□□ 2.24
CLPB-202ENST00000340729 ERCC6Q03468 1493 aa29.01■■■□□ 2.23
CLPB-202ENST00000340729 ATP1B4Q9UN42 357 aaPredicted RBP28.98■■■□□ 2.23
CLPB-202ENST00000340729 RBM19Q9Y4C8 960 aaKnown RBP28.98■■■□□ 2.23
CLPB-202ENST00000340729 KDM5BQ9UGL1 1544 aa28.98■■■□□ 2.23
CLPB-202ENST00000340729 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
CLPB-202ENST00000340729 TRIM52Q96A61 297 aa28.98■■■□□ 2.23
CLPB-202ENST00000340729 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
CLPB-202ENST00000340729 GRIN2BQ13224 1484 aa28.96■■■□□ 2.23
CLPB-202ENST00000340729 NAIPQ13075 1403 aa28.96■■■□□ 2.23
CLPB-202ENST00000340729 MTUS2Q5JR59 1369 aa28.94■■■□□ 2.22
CLPB-202ENST00000340729 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
CLPB-202ENST00000340729 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
CLPB-202ENST00000340729 SUPT6HQ7KZ85 1726 aaKnown RBP28.91■■■□□ 2.22
CLPB-202ENST00000340729 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
CLPB-202ENST00000340729 NCOA2Q15596 1464 aa28.9■■■□□ 2.22
CLPB-202ENST00000340729 EHBP1L1Q8N3D4 1523 aa28.9■■■□□ 2.22
CLPB-202ENST00000340729 IQGAP2Q13576 1575 aa28.86■■■□□ 2.21
CLPB-202ENST00000340729 ARHGEF11O15085 1522 aa28.86■■■□□ 2.21
CLPB-202ENST00000340729 GCC2Q8IWJ2 1684 aa28.83■■■□□ 2.21
CLPB-202ENST00000340729 HECW1Q76N89 1606 aa28.83■■■□□ 2.21
CLPB-202ENST00000340729 UGGT2Q9NYU1 1516 aa28.82■■■□□ 2.2
CLPB-202ENST00000340729 AKNAQ7Z591 1439 aa28.81■■■□□ 2.2
CLPB-202ENST00000340729 TCOF1Q13428 1488 aaKnown RBP28.79■■■□□ 2.2
CLPB-202ENST00000340729 ERICH6BQ5W0A0 696 aa28.79■■■□□ 2.2
CLPB-202ENST00000340729 FANCIQ9NVI1 1328 aa28.72■■■□□ 2.19
CLPB-202ENST00000340729 HNRNPUQ00839 825 aaKnown RBP eCLIP28.71■■■□□ 2.19
CLPB-202ENST00000340729 WASHC2AQ641Q2 1341 aa28.7■■■□□ 2.18
CLPB-202ENST00000340729 DENND4BO75064 1496 aaPredicted RBP28.7■■■□□ 2.18
CLPB-202ENST00000340729 GRIN2AQ12879 1464 aa28.69■■■□□ 2.18
CLPB-202ENST00000340729 CNTLNQ9NXG0 1405 aa28.67■■■□□ 2.18
CLPB-202ENST00000340729 HSPA5P11021 654 aaKnown RBP28.66■■■□□ 2.18
CLPB-202ENST00000340729 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
CLPB-202ENST00000340729 MAGI1Q96QZ7 1491 aaPredicted RBP28.63■■■□□ 2.17
CLPB-202ENST00000340729 CDK11AQ9UQ88 783 aaPredicted RBP28.62■■■□□ 2.17
CLPB-202ENST00000340729 EIF4G2P78344 907 aaKnown RBP eCLIP28.62■■■□□ 2.17
CLPB-202ENST00000340729 KIAA0586Q9BVV6 1533 aa28.6■■■□□ 2.17
CLPB-202ENST00000340729 MIA2Q96PC5 1412 aa28.6■■■□□ 2.17
CLPB-202ENST00000340729 KIAA0556O60303 1618 aa28.59■■■□□ 2.17
CLPB-202ENST00000340729 BCL11AQ9H165 835 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms