RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
CDK11B-201ENST00000340677 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
CDK11B-201ENST00000340677 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
CDK11B-201ENST00000340677 PDE4CQ08493 712 aa24.72■■□□□ 1.55
CDK11B-201ENST00000340677 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
CDK11B-201ENST00000340677 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
CDK11B-201ENST00000340677 PRXQ9BXM0 1461 aa24.67■■□□□ 1.54
CDK11B-201ENST00000340677 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
CDK11B-201ENST00000340677 WDR62O43379 1518 aa24.65■■□□□ 1.54
CDK11B-201ENST00000340677 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.54
CDK11B-201ENST00000340677 RANGAP1P46060 587 aaPredicted RBP24.63■■□□□ 1.53
CDK11B-201ENST00000340677 ARXQ96QS3 562 aa24.62■■□□□ 1.53
CDK11B-201ENST00000340677 TARBP1Q13395 1621 aaKnown RBP24.59■■□□□ 1.53
CDK11B-201ENST00000340677 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
CDK11B-201ENST00000340677 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
CDK11B-201ENST00000340677 DIEXFQ68CQ4 756 aaKnown RBP24.57■■□□□ 1.52
CDK11B-201ENST00000340677 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
CDK11B-201ENST00000340677 DEKP35659 375 aaKnown RBP24.56■■□□□ 1.52
CDK11B-201ENST00000340677 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
CDK11B-201ENST00000340677 IGF1RP08069 1367 aa24.54■■□□□ 1.52
CDK11B-201ENST00000340677 CUL7Q14999 1698 aa24.53■■□□□ 1.52
CDK11B-201ENST00000340677 MYT1LQ9UL68 1186 aa24.5■■□□□ 1.51
CDK11B-201ENST00000340677 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
CDK11B-201ENST00000340677 FGD1P98174 961 aa24.46■■□□□ 1.51
CDK11B-201ENST00000340677 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
CDK11B-201ENST00000340677 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
CDK11B-201ENST00000340677 UBTFP17480 764 aaKnown RBP24.45■■□□□ 1.51
CDK11B-201ENST00000340677 TIMELESSQ9UNS1 1208 aa24.44■■□□□ 1.5
CDK11B-201ENST00000340677 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
CDK11B-201ENST00000340677 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
CDK11B-201ENST00000340677 BCL11BQ9C0K0 894 aaPredicted RBP24.42■■□□□ 1.5
CDK11B-201ENST00000340677 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
CDK11B-201ENST00000340677 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
CDK11B-201ENST00000340677 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
CDK11B-201ENST00000340677 A0A0U1RQG5 324 aaPredicted RBP24.37■■□□□ 1.49
CDK11B-201ENST00000340677 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
CDK11B-201ENST00000340677 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
CDK11B-201ENST00000340677 CLIP1P30622 1438 aa24.3■■□□□ 1.48
CDK11B-201ENST00000340677 MSH5O43196 834 aa24.3■■□□□ 1.48
CDK11B-201ENST00000340677 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
CDK11B-201ENST00000340677 ZMYND15Q9H091 742 aa24.27■■□□□ 1.48
CDK11B-201ENST00000340677 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
CDK11B-201ENST00000340677 CTTNBP2Q8WZ74 1663 aa24.25■■□□□ 1.47
CDK11B-201ENST00000340677 AAMPQ13685 434 aa24.23■■□□□ 1.47
CDK11B-201ENST00000340677 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
CDK11B-201ENST00000340677 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
CDK11B-201ENST00000340677 RTN4Q9NQC3 1192 aaKnown RBP24.19■■□□□ 1.46
CDK11B-201ENST00000340677 RBM19Q9Y4C8 960 aaKnown RBP24.19■■□□□ 1.46
CDK11B-201ENST00000340677 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
CDK11B-201ENST00000340677 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
CDK11B-201ENST00000340677 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.464e-7■■■■■ 29.4
CDK11B-201ENST00000340677 IL27Q8NEV9 243 aa24.17■■□□□ 1.46
CDK11B-201ENST00000340677 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
CDK11B-201ENST00000340677 RBM10P98175 930 aaKnown RBP24.12■■□□□ 1.45
CDK11B-201ENST00000340677 TAF7LQ5H9L4 462 aa24.1■■□□□ 1.45
CDK11B-201ENST00000340677 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
CDK11B-201ENST00000340677 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
CDK11B-201ENST00000340677 EFCAB5A4FU69 1503 aa24.08■■□□□ 1.45
CDK11B-201ENST00000340677 ARHGAP35Q9NRY4 1499 aa24.08■■□□□ 1.45
CDK11B-201ENST00000340677 GLIPR1L2Q4G1C9 344 aa24.05■■□□□ 1.44
CDK11B-201ENST00000340677 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
CDK11B-201ENST00000340677 VSIG10Q8N0Z9 540 aa24.01■■□□□ 1.43
CDK11B-201ENST00000340677 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
CDK11B-201ENST00000340677 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
CDK11B-201ENST00000340677 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
CDK11B-201ENST00000340677 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
CDK11B-201ENST00000340677 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
CDK11B-201ENST00000340677 MAP3K1Q13233 1512 aa23.86■■□□□ 1.41
CDK11B-201ENST00000340677 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
CDK11B-201ENST00000340677 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
CDK11B-201ENST00000340677 TULP1O00294 542 aaPredicted RBP23.84■■□□□ 1.41
CDK11B-201ENST00000340677 NUP160Q12769 1436 aa23.81■■□□□ 1.4
CDK11B-201ENST00000340677 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
CDK11B-201ENST00000340677 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
CDK11B-201ENST00000340677 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
CDK11B-201ENST00000340677 DHX37Q8IY37 1157 aaKnown RBP23.78■■□□□ 1.4
CDK11B-201ENST00000340677 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.4
CDK11B-201ENST00000340677 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
CDK11B-201ENST00000340677 PCF11O94913 1555 aaKnown RBP23.75■■□□□ 1.39
CDK11B-201ENST00000340677 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
CDK11B-201ENST00000340677 CFAP43Q8NDM7 1665 aa23.75■■□□□ 1.39
CDK11B-201ENST00000340677 CASKIN1Q8WXD9 1431 aa23.74■■□□□ 1.39
CDK11B-201ENST00000340677 PAXIP1Q6ZW49 1069 aaPredicted RBP23.74■■□□□ 1.39
CDK11B-201ENST00000340677 HOMEZQ8IX15 550 aa23.74■■□□□ 1.39
CDK11B-201ENST00000340677 CHMP4AQ9BY43 222 aa23.73■■□□□ 1.39
CDK11B-201ENST00000340677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
CDK11B-201ENST00000340677 MIER1Q8N108 512 aa23.72■■□□□ 1.39
CDK11B-201ENST00000340677 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
CDK11B-201ENST00000340677 CHD1O14646 1710 aa23.71■■□□□ 1.39
CDK11B-201ENST00000340677 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
CDK11B-201ENST00000340677 DISP1Q96F81 1524 aa23.65■■□□□ 1.38
CDK11B-201ENST00000340677 CCER1Q8TC90 406 aaPredicted RBP23.62■■□□□ 1.37
CDK11B-201ENST00000340677 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
CDK11B-201ENST00000340677 HECW1Q76N89 1606 aa23.58■■□□□ 1.37
CDK11B-201ENST00000340677 BRD2P25440 801 aaKnown RBP23.57■■□□□ 1.36
CDK11B-201ENST00000340677 OSCARQ8IYS5 282 aa23.57■■□□□ 1.36
CDK11B-201ENST00000340677 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
CDK11B-201ENST00000340677 LRRIQ1Q96JM4 1722 aa23.57■■□□□ 1.36
CDK11B-201ENST00000340677 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
CDK11B-201ENST00000340677 FBLN2P98095 1184 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms