RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
ARHGEF1-201ENST00000337665 EFCAB5A4FU69 1503 aa21.5■■□□□ 1.03
ARHGEF1-201ENST00000337665 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
ARHGEF1-201ENST00000337665 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
ARHGEF1-201ENST00000337665 LRRC9Q6ZRR7 1453 aa21.48■■□□□ 1.03
ARHGEF1-201ENST00000337665 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
ARHGEF1-201ENST00000337665 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
ARHGEF1-201ENST00000337665 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.021e-6■■■■■ 36
ARHGEF1-201ENST00000337665 FYCO1Q9BQS8 1478 aa21.4■■□□□ 1.02
ARHGEF1-201ENST00000337665 TARBP1Q13395 1621 aaKnown RBP21.38■■□□□ 1.01
ARHGEF1-201ENST00000337665 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
ARHGEF1-201ENST00000337665 FHOD3Q2V2M9 1422 aa21.37■■□□□ 1.01
ARHGEF1-201ENST00000337665 CASKIN1Q8WXD9 1431 aa21.37■■□□□ 1.01
ARHGEF1-201ENST00000337665 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
ARHGEF1-201ENST00000337665 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
ARHGEF1-201ENST00000337665 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
ARHGEF1-201ENST00000337665 PHLDB1Q86UU1 1377 aa21.35■■□□□ 1.01
ARHGEF1-201ENST00000337665 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
ARHGEF1-201ENST00000337665 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
ARHGEF1-201ENST00000337665 P3H3Q8IVL6 736 aa21.3■■□□□ 1
ARHGEF1-201ENST00000337665 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
ARHGEF1-201ENST00000337665 ACIN1Q9UKV3 1341 aaKnown RBP21.27■■□□□ 1
ARHGEF1-201ENST00000337665 PBRM1Q86U86 1689 aa21.27■■□□□ 1
ARHGEF1-201ENST00000337665 FMN1Q68DA7 1419 aa21.27■■□□□ 1
ARHGEF1-201ENST00000337665 RAB3GAP2Q9H2M9 1393 aa21.25■□□□□ 0.99
ARHGEF1-201ENST00000337665 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
ARHGEF1-201ENST00000337665 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
ARHGEF1-201ENST00000337665 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.994e-7■□□□□ 8.1
ARHGEF1-201ENST00000337665 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
ARHGEF1-201ENST00000337665 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
ARHGEF1-201ENST00000337665 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
ARHGEF1-201ENST00000337665 ITGAEP38570 1179 aa21.19■□□□□ 0.98
ARHGEF1-201ENST00000337665 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
ARHGEF1-201ENST00000337665 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
ARHGEF1-201ENST00000337665 MIER1Q8N108 512 aa21.14■□□□□ 0.98
ARHGEF1-201ENST00000337665 CENPBP07199 599 aaPredicted RBP21.14■□□□□ 0.97
ARHGEF1-201ENST00000337665 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
ARHGEF1-201ENST00000337665 FGD6Q6ZV73 1430 aa21.11■□□□□ 0.97
ARHGEF1-201ENST00000337665 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
ARHGEF1-201ENST00000337665 SUPT6HQ7KZ85 1726 aaKnown RBP21.07■□□□□ 0.96
ARHGEF1-201ENST00000337665 IQGAP2Q13576 1575 aa21.07■□□□□ 0.96
ARHGEF1-201ENST00000337665 WDR62O43379 1518 aa21.06■□□□□ 0.96
ARHGEF1-201ENST00000337665 EHBP1L1Q8N3D4 1523 aa21.06■□□□□ 0.96
ARHGEF1-201ENST00000337665 ARHGEF11O15085 1522 aa21.06■□□□□ 0.96
ARHGEF1-201ENST00000337665 NCOA2Q15596 1464 aa21.04■□□□□ 0.96
ARHGEF1-201ENST00000337665 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
ARHGEF1-201ENST00000337665 MAGI3Q5TCQ9 1506 aa21.02■□□□□ 0.96
ARHGEF1-201ENST00000337665 UGGT2Q9NYU1 1516 aa21.02■□□□□ 0.96
ARHGEF1-201ENST00000337665 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
ARHGEF1-201ENST00000337665 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
ARHGEF1-201ENST00000337665 HECW1Q76N89 1606 aa21.01■□□□□ 0.95
ARHGEF1-201ENST00000337665 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
ARHGEF1-201ENST00000337665 PTPRKQ15262 1439 aa20.98■□□□□ 0.95
ARHGEF1-201ENST00000337665 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
ARHGEF1-201ENST00000337665 ZNF608Q9ULD9 1512 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF1-201ENST00000337665 HFM1A2PYH4 1435 aa20.96■□□□□ 0.95
ARHGEF1-201ENST00000337665 GTF3C3Q9Y5Q9 886 aa20.94■□□□□ 0.94
ARHGEF1-201ENST00000337665 TCOF1Q13428 1488 aaKnown RBP20.92■□□□□ 0.94
ARHGEF1-201ENST00000337665 EPRSP07814 1512 aaKnown RBP20.92■□□□□ 0.94
ARHGEF1-201ENST00000337665 TIMELESSQ9UNS1 1208 aa20.91■□□□□ 0.94
ARHGEF1-201ENST00000337665 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
ARHGEF1-201ENST00000337665 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.93
ARHGEF1-201ENST00000337665 NAIPQ13075 1403 aa20.88■□□□□ 0.93
ARHGEF1-201ENST00000337665 YTHDC1Q96MU7 727 aaKnown RBP20.88■□□□□ 0.93
ARHGEF1-201ENST00000337665 KIAA0556O60303 1618 aa20.88■□□□□ 0.93
ARHGEF1-201ENST00000337665 KIAA0586Q9BVV6 1533 aa20.87■□□□□ 0.93
ARHGEF1-201ENST00000337665 GCC2Q8IWJ2 1684 aa20.87■□□□□ 0.93
ARHGEF1-201ENST00000337665 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
ARHGEF1-201ENST00000337665 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
ARHGEF1-201ENST00000337665 CDK13Q14004 1512 aaKnown RBP20.85■□□□□ 0.93
ARHGEF1-201ENST00000337665 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
ARHGEF1-201ENST00000337665 MIA2Q96PC5 1412 aa20.8■□□□□ 0.92
ARHGEF1-201ENST00000337665 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
ARHGEF1-201ENST00000337665 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF1-201ENST00000337665 RAPGEF6Q8TEU7 1601 aa20.77■□□□□ 0.92
ARHGEF1-201ENST00000337665 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF1-201ENST00000337665 NUP153P49790 1475 aaKnown RBP20.74■□□□□ 0.91
ARHGEF1-201ENST00000337665 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
ARHGEF1-201ENST00000337665 KDM6BO15054 1643 aa20.73■□□□□ 0.91
ARHGEF1-201ENST00000337665 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
ARHGEF1-201ENST00000337665 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
ARHGEF1-201ENST00000337665 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF1-201ENST00000337665 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
ARHGEF1-201ENST00000337665 DNMT1P26358 1616 aaKnown RBP20.68■□□□□ 0.9
ARHGEF1-201ENST00000337665 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
ARHGEF1-201ENST00000337665 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
ARHGEF1-201ENST00000337665 NUP160Q12769 1436 aa20.63■□□□□ 0.89
ARHGEF1-201ENST00000337665 ADCY10Q96PN6 1610 aa20.63■□□□□ 0.89
ARHGEF1-201ENST00000337665 RRP7BPQ9NSQ0 103 aa20.62■□□□□ 0.89
ARHGEF1-201ENST00000337665 DAPK1P53355 1430 aa20.62■□□□□ 0.89
ARHGEF1-201ENST00000337665 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
ARHGEF1-201ENST00000337665 CHIC2Q9UKJ5 165 aa20.6■□□□□ 0.89
ARHGEF1-201ENST00000337665 ABCC5O15440 1437 aa20.59■□□□□ 0.89
ARHGEF1-201ENST00000337665 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
ARHGEF1-201ENST00000337665 ITSN2Q9NZM3 1697 aa20.58■□□□□ 0.89
ARHGEF1-201ENST00000337665 TROQ12816 1431 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF1-201ENST00000337665 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF1-201ENST00000337665 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
ARHGEF1-201ENST00000337665 DDX10Q13206 875 aaKnown RBP20.56■□□□□ 0.88
ARHGEF1-201ENST00000337665 KIF14Q15058 1648 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms