RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
ARHGEF1-201ENST00000337665 CCDC180Q9P1Z9 1646 aa26.51■■□□□ 1.83
ARHGEF1-201ENST00000337665 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
ARHGEF1-201ENST00000337665 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
ARHGEF1-201ENST00000337665 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
ARHGEF1-201ENST00000337665 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
ARHGEF1-201ENST00000337665 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
ARHGEF1-201ENST00000337665 MYO15BQ96JP2 1530 aa24.85■■□□□ 1.57
ARHGEF1-201ENST00000337665 ABCC9O60706 1549 aa24.6■■□□□ 1.53
ARHGEF1-201ENST00000337665 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
ARHGEF1-201ENST00000337665 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
ARHGEF1-201ENST00000337665 NACADO15069 1562 aa24.46■■□□□ 1.51
ARHGEF1-201ENST00000337665 RSF1Q96T23 1441 aaPredicted RBP24.26■■□□□ 1.47
ARHGEF1-201ENST00000337665 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
ARHGEF1-201ENST00000337665 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
ARHGEF1-201ENST00000337665 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
ARHGEF1-201ENST00000337665 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
ARHGEF1-201ENST00000337665 WIZO95785 1651 aa23.81■■□□□ 1.4
ARHGEF1-201ENST00000337665 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
ARHGEF1-201ENST00000337665 LOC105371045A0A1W2PR82 267 aa23.68■■□□□ 1.38
ARHGEF1-201ENST00000337665 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
ARHGEF1-201ENST00000337665 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
ARHGEF1-201ENST00000337665 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
ARHGEF1-201ENST00000337665 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
ARHGEF1-201ENST00000337665 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
ARHGEF1-201ENST00000337665 HRCP23327 699 aa23.4■■□□□ 1.34
ARHGEF1-201ENST00000337665 PCGF6Q9BYE7 350 aa23.4■■□□□ 1.34
ARHGEF1-201ENST00000337665 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
ARHGEF1-201ENST00000337665 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
ARHGEF1-201ENST00000337665 PEG3Q9GZU2 1588 aa23.24■■□□□ 1.31
ARHGEF1-201ENST00000337665 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
ARHGEF1-201ENST00000337665 TRIM26Q12899 539 aaPredicted RBP23.15■■□□□ 1.3
ARHGEF1-201ENST00000337665 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.39e-7■■■□□ 16.5
ARHGEF1-201ENST00000337665 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
ARHGEF1-201ENST00000337665 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
ARHGEF1-201ENST00000337665 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
ARHGEF1-201ENST00000337665 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
ARHGEF1-201ENST00000337665 SOGA1O94964 1423 aa22.82■■□□□ 1.24
ARHGEF1-201ENST00000337665 EEA1Q15075 1411 aa22.81■■□□□ 1.24
ARHGEF1-201ENST00000337665 PPARGC1BQ86YN6 1023 aaKnown RBP22.8■■□□□ 1.24
ARHGEF1-201ENST00000337665 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
ARHGEF1-201ENST00000337665 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
ARHGEF1-201ENST00000337665 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
ARHGEF1-201ENST00000337665 TNIKQ9UKE5 1360 aa22.67■■□□□ 1.22
ARHGEF1-201ENST00000337665 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.22
ARHGEF1-201ENST00000337665 CEP162Q5TB80 1403 aa22.64■■□□□ 1.21
ARHGEF1-201ENST00000337665 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
ARHGEF1-201ENST00000337665 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
ARHGEF1-201ENST00000337665 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.2
ARHGEF1-201ENST00000337665 GOLGA3Q08378 1498 aa22.57■■□□□ 1.2
ARHGEF1-201ENST00000337665 KIF21BO75037 1637 aa22.57■■□□□ 1.2
ARHGEF1-201ENST00000337665 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
ARHGEF1-201ENST00000337665 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
ARHGEF1-201ENST00000337665 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
ARHGEF1-201ENST00000337665 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
ARHGEF1-201ENST00000337665 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
ARHGEF1-201ENST00000337665 CFTRP13569 1480 aa22.33■■□□□ 1.17
ARHGEF1-201ENST00000337665 RAPGEF2Q9Y4G8 1499 aa22.31■■□□□ 1.16
ARHGEF1-201ENST00000337665 CUX1P39880 1505 aa22.3■■□□□ 1.16
ARHGEF1-201ENST00000337665 CLIP1P30622 1438 aa22.24■■□□□ 1.15
ARHGEF1-201ENST00000337665 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
ARHGEF1-201ENST00000337665 PRXQ9BXM0 1461 aa22.21■■□□□ 1.15
ARHGEF1-201ENST00000337665 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
ARHGEF1-201ENST00000337665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
ARHGEF1-201ENST00000337665 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
ARHGEF1-201ENST00000337665 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
ARHGEF1-201ENST00000337665 KIF27Q86VH2 1401 aa22.08■■□□□ 1.12
ARHGEF1-201ENST00000337665 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
ARHGEF1-201ENST00000337665 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
ARHGEF1-201ENST00000337665 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
ARHGEF1-201ENST00000337665 FGD5Q6ZNL6 1462 aa21.89■■□□□ 1.09
ARHGEF1-201ENST00000337665 CUX2O14529 1486 aa21.87■■□□□ 1.09
ARHGEF1-201ENST00000337665 IGF1RP08069 1367 aa21.87■■□□□ 1.09
ARHGEF1-201ENST00000337665 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
ARHGEF1-201ENST00000337665 APLP2Q06481 763 aa21.84■■□□□ 1.09
ARHGEF1-201ENST00000337665 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
ARHGEF1-201ENST00000337665 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.09
ARHGEF1-201ENST00000337665 DNMBPQ6XZF7 1577 aa21.8■■□□□ 1.08
ARHGEF1-201ENST00000337665 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
ARHGEF1-201ENST00000337665 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
ARHGEF1-201ENST00000337665 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
ARHGEF1-201ENST00000337665 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
ARHGEF1-201ENST00000337665 KANK4Q5T7N3 995 aaPredicted RBP21.71■■□□□ 1.07
ARHGEF1-201ENST00000337665 NESP48681 1621 aa21.7■■□□□ 1.06
ARHGEF1-201ENST00000337665 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
ARHGEF1-201ENST00000337665 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
ARHGEF1-201ENST00000337665 POLA1P09884 1462 aaPredicted RBP21.67■■□□□ 1.06
ARHGEF1-201ENST00000337665 MAP3K1Q13233 1512 aa21.66■■□□□ 1.06
ARHGEF1-201ENST00000337665 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
ARHGEF1-201ENST00000337665 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.05
ARHGEF1-201ENST00000337665 CUL7Q14999 1698 aa21.62■■□□□ 1.05
ARHGEF1-201ENST00000337665 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
ARHGEF1-201ENST00000337665 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
ARHGEF1-201ENST00000337665 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
ARHGEF1-201ENST00000337665 CTTNBP2Q8WZ74 1663 aa21.56■■□□□ 1.04
ARHGEF1-201ENST00000337665 CFAP43Q8NDM7 1665 aa21.54■■□□□ 1.04
ARHGEF1-201ENST00000337665 ZNF316A6NFI3 1004 aaPredicted RBP21.52■■□□□ 1.04
ARHGEF1-201ENST00000337665 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
ARHGEF1-201ENST00000337665 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
ARHGEF1-201ENST00000337665 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms