RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 SIN3AQ96ST3 1273 aa14.07□□□□□ -0.16
MSL3-202ENST00000337339 FHOD3Q2V2M9 1422 aa14.07□□□□□ -0.16
MSL3-202ENST00000337339 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
MSL3-202ENST00000337339 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
MSL3-202ENST00000337339 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
MSL3-202ENST00000337339 PHLDB1Q86UU1 1377 aa14□□□□□ -0.17
MSL3-202ENST00000337339 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
MSL3-202ENST00000337339 RRBP1Q9P2E9 1410 aaKnown RBP13.98□□□□□ -0.17
MSL3-202ENST00000337339 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
MSL3-202ENST00000337339 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
MSL3-202ENST00000337339 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
MSL3-202ENST00000337339 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
MSL3-202ENST00000337339 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
MSL3-202ENST00000337339 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
MSL3-202ENST00000337339 FBLN2P98095 1184 aa13.94□□□□□ -0.18
MSL3-202ENST00000337339 LRRC9Q6ZRR7 1453 aa13.93□□□□□ -0.18
MSL3-202ENST00000337339 SETD5Q9C0A6 1442 aa13.93□□□□□ -0.18
MSL3-202ENST00000337339 TRIM52Q96A61 297 aa13.92□□□□□ -0.18
MSL3-202ENST00000337339 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
MSL3-202ENST00000337339 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
MSL3-202ENST00000337339 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
MSL3-202ENST00000337339 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
MSL3-202ENST00000337339 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
MSL3-202ENST00000337339 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
MSL3-202ENST00000337339 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
MSL3-202ENST00000337339 GAPVD1Q14C86 1478 aa13.85□□□□□ -0.19
MSL3-202ENST00000337339 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
MSL3-202ENST00000337339 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
MSL3-202ENST00000337339 PCF11O94913 1555 aaKnown RBP13.82□□□□□ -0.2
MSL3-202ENST00000337339 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
MSL3-202ENST00000337339 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.21e-7■■■■□ 19.5
MSL3-202ENST00000337339 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
MSL3-202ENST00000337339 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
MSL3-202ENST00000337339 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
MSL3-202ENST00000337339 FOXD1Q16676 465 aa13.78□□□□□ -0.2
MSL3-202ENST00000337339 BCANQ96GW7 911 aa13.78□□□□□ -0.2
MSL3-202ENST00000337339 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
MSL3-202ENST00000337339 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
MSL3-202ENST00000337339 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
MSL3-202ENST00000337339 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
MSL3-202ENST00000337339 ANP32CO43423 234 aa13.74□□□□□ -0.21
MSL3-202ENST00000337339 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
MSL3-202ENST00000337339 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
MSL3-202ENST00000337339 POLR3GLQ9BT43 218 aa13.71□□□□□ -0.21
MSL3-202ENST00000337339 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
MSL3-202ENST00000337339 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
MSL3-202ENST00000337339 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
MSL3-202ENST00000337339 NCOA2Q15596 1464 aa13.7□□□□□ -0.22
MSL3-202ENST00000337339 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
MSL3-202ENST00000337339 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
MSL3-202ENST00000337339 PTPRKQ15262 1439 aa13.69□□□□□ -0.22
MSL3-202ENST00000337339 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
MSL3-202ENST00000337339 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
MSL3-202ENST00000337339 MYOM3Q5VTT5 1437 aa13.66□□□□□ -0.22
MSL3-202ENST00000337339 CUL7Q14999 1698 aa13.66□□□□□ -0.22
MSL3-202ENST00000337339 CDK11AQ9UQ88 783 aaPredicted RBP13.65□□□□□ -0.22
MSL3-202ENST00000337339 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
MSL3-202ENST00000337339 TIMELESSQ9UNS1 1208 aa13.64□□□□□ -0.23
MSL3-202ENST00000337339 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
MSL3-202ENST00000337339 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
MSL3-202ENST00000337339 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
MSL3-202ENST00000337339 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
MSL3-202ENST00000337339 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
MSL3-202ENST00000337339 FKBP8Q14318 412 aa13.62□□□□□ -0.23
MSL3-202ENST00000337339 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
MSL3-202ENST00000337339 NEFLP07196 543 aa13.61□□□□□ -0.23
MSL3-202ENST00000337339 CDK13Q14004 1512 aaKnown RBP13.61□□□□□ -0.23
MSL3-202ENST00000337339 KIF21AQ7Z4S6 1674 aa13.6□□□□□ -0.23
MSL3-202ENST00000337339 NAIPQ13075 1403 aa13.6□□□□□ -0.23
MSL3-202ENST00000337339 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
MSL3-202ENST00000337339 UACAQ9BZF9 1416 aa13.59□□□□□ -0.23
MSL3-202ENST00000337339 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
MSL3-202ENST00000337339 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
MSL3-202ENST00000337339 CTTNBP2Q8WZ74 1663 aa13.58□□□□□ -0.24
MSL3-202ENST00000337339 HSPA5P11021 654 aaKnown RBP13.58□□□□□ -0.24
MSL3-202ENST00000337339 GRIN2BQ13224 1484 aa13.57□□□□□ -0.24
MSL3-202ENST00000337339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSL3-202ENST00000337339 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSL3-202ENST00000337339 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSL3-202ENST00000337339 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
MSL3-202ENST00000337339 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
MSL3-202ENST00000337339 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
MSL3-202ENST00000337339 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
MSL3-202ENST00000337339 SENP3-EIF4A1A0A087X0R7 540 aa13.54□□□□□ -0.24
MSL3-202ENST00000337339 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.24
MSL3-202ENST00000337339 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.24
MSL3-202ENST00000337339 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.24
MSL3-202ENST00000337339 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.24
MSL3-202ENST00000337339 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.25
MSL3-202ENST00000337339 IQGAP2Q13576 1575 aa13.52□□□□□ -0.25
MSL3-202ENST00000337339 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
MSL3-202ENST00000337339 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
MSL3-202ENST00000337339 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
MSL3-202ENST00000337339 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
MSL3-202ENST00000337339 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
MSL3-202ENST00000337339 TARBP1Q13395 1621 aaKnown RBP13.49□□□□□ -0.25
MSL3-202ENST00000337339 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
MSL3-202ENST00000337339 THOC2Q8NI27 1593 aaKnown RBP13.48□□□□□ -0.25
MSL3-202ENST00000337339 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
MSL3-202ENST00000337339 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms