RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
LIPA-202ENST00000336233 EFCAB5A4FU69 1503 aa21.18■□□□□ 0.98
LIPA-202ENST00000336233 CTTNBP2Q8WZ74 1663 aa21.16■□□□□ 0.98
LIPA-202ENST00000336233 LRRC9Q6ZRR7 1453 aa21.14■□□□□ 0.97
LIPA-202ENST00000336233 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
LIPA-202ENST00000336233 PCF11O94913 1555 aaKnown RBP21.13■□□□□ 0.97
LIPA-202ENST00000336233 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
LIPA-202ENST00000336233 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
LIPA-202ENST00000336233 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.97
LIPA-202ENST00000336233 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
LIPA-202ENST00000336233 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
LIPA-202ENST00000336233 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
LIPA-202ENST00000336233 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
LIPA-202ENST00000336233 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
LIPA-202ENST00000336233 FHOD3Q2V2M9 1422 aa20.99■□□□□ 0.95
LIPA-202ENST00000336233 SAMD9Q5K651 1589 aa20.99■□□□□ 0.95
LIPA-202ENST00000336233 PHLDB1Q86UU1 1377 aa20.98■□□□□ 0.95
LIPA-202ENST00000336233 KIF21AQ7Z4S6 1674 aa20.98■□□□□ 0.95
LIPA-202ENST00000336233 NEUROD1Q13562 356 aa20.97■□□□□ 0.95
LIPA-202ENST00000336233 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
LIPA-202ENST00000336233 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
LIPA-202ENST00000336233 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
LIPA-202ENST00000336233 TARBP1Q13395 1621 aaKnown RBP20.94■□□□□ 0.94
LIPA-202ENST00000336233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.94■□□□□ 0.94
LIPA-202ENST00000336233 RAB3GAP2Q9H2M9 1393 aa20.92■□□□□ 0.94
LIPA-202ENST00000336233 MAPKBP1O60336 1514 aa20.91■□□□□ 0.94
LIPA-202ENST00000336233 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
LIPA-202ENST00000336233 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
LIPA-202ENST00000336233 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
LIPA-202ENST00000336233 P3H3Q8IVL6 736 aa20.86■□□□□ 0.93
LIPA-202ENST00000336233 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
LIPA-202ENST00000336233 MIER1Q8N108 512 aa20.84■□□□□ 0.93
LIPA-202ENST00000336233 LRRIQ1Q96JM4 1722 aa20.83■□□□□ 0.93
LIPA-202ENST00000336233 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
LIPA-202ENST00000336233 ITGAEP38570 1179 aa20.81■□□□□ 0.92
LIPA-202ENST00000336233 FGD6Q6ZV73 1430 aa20.78■□□□□ 0.92
LIPA-202ENST00000336233 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
LIPA-202ENST00000336233 ADAMTS12P58397 1594 aa20.77■□□□□ 0.91
LIPA-202ENST00000336233 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
LIPA-202ENST00000336233 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
LIPA-202ENST00000336233 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
LIPA-202ENST00000336233 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
LIPA-202ENST00000336233 ATP1B4Q9UN42 357 aaPredicted RBP20.72■□□□□ 0.91
LIPA-202ENST00000336233 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
LIPA-202ENST00000336233 CCDC18Q5T9S5 1454 aa20.71■□□□□ 0.91
LIPA-202ENST00000336233 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
LIPA-202ENST00000336233 MTUS2Q5JR59 1369 aa20.71■□□□□ 0.91
LIPA-202ENST00000336233 IQGAP2Q13576 1575 aa20.7■□□□□ 0.9
LIPA-202ENST00000336233 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
LIPA-202ENST00000336233 MYOM3Q5VTT5 1437 aa20.68■□□□□ 0.9
LIPA-202ENST00000336233 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
LIPA-202ENST00000336233 UGGT2Q9NYU1 1516 aa20.67■□□□□ 0.9
LIPA-202ENST00000336233 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
LIPA-202ENST00000336233 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
LIPA-202ENST00000336233 WDR62O43379 1518 aa20.65■□□□□ 0.9
LIPA-202ENST00000336233 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
LIPA-202ENST00000336233 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.89
LIPA-202ENST00000336233 MAGI3Q5TCQ9 1506 aa20.62■□□□□ 0.89
LIPA-202ENST00000336233 TCOF1Q13428 1488 aaKnown RBP20.6■□□□□ 0.89
LIPA-202ENST00000336233 YTHDC1Q96MU7 727 aaKnown RBP20.6■□□□□ 0.89
LIPA-202ENST00000336233 PTPRKQ15262 1439 aa20.6■□□□□ 0.89
LIPA-202ENST00000336233 UACAQ9BZF9 1416 aa20.57■□□□□ 0.88
LIPA-202ENST00000336233 EPRSP07814 1512 aaKnown RBP20.56■□□□□ 0.88
LIPA-202ENST00000336233 NAIPQ13075 1403 aa20.55■□□□□ 0.88
LIPA-202ENST00000336233 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
LIPA-202ENST00000336233 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
LIPA-202ENST00000336233 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.88
LIPA-202ENST00000336233 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
LIPA-202ENST00000336233 KIAA0586Q9BVV6 1533 aa20.51■□□□□ 0.87
LIPA-202ENST00000336233 KIAA0556O60303 1618 aa20.5■□□□□ 0.87
LIPA-202ENST00000336233 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
LIPA-202ENST00000336233 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
LIPA-202ENST00000336233 CDK13Q14004 1512 aaKnown RBP20.46■□□□□ 0.87
LIPA-202ENST00000336233 DISP1Q96F81 1524 aa20.46■□□□□ 0.87
LIPA-202ENST00000336233 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
LIPA-202ENST00000336233 GRIN2AQ12879 1464 aa20.44■□□□□ 0.86
LIPA-202ENST00000336233 MAGI1Q96QZ7 1491 aaPredicted RBP20.4■□□□□ 0.86
LIPA-202ENST00000336233 RAPGEF6Q8TEU7 1601 aa20.4■□□□□ 0.86
LIPA-202ENST00000336233 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
LIPA-202ENST00000336233 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
LIPA-202ENST00000336233 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
LIPA-202ENST00000336233 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.85
LIPA-202ENST00000336233 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.85
LIPA-202ENST00000336233 PRKCSHP14314 528 aaPredicted RBP20.33■□□□□ 0.84
LIPA-202ENST00000336233 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
LIPA-202ENST00000336233 KDM6BO15054 1643 aa20.32■□□□□ 0.84
LIPA-202ENST00000336233 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
LIPA-202ENST00000336233 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
LIPA-202ENST00000336233 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
LIPA-202ENST00000336233 DAPK1P53355 1430 aa20.28■□□□□ 0.84
LIPA-202ENST00000336233 ADCY10Q96PN6 1610 aa20.28■□□□□ 0.84
LIPA-202ENST00000336233 NUP160Q12769 1436 aa20.25■□□□□ 0.83
LIPA-202ENST00000336233 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
LIPA-202ENST00000336233 RRP7BPQ9NSQ0 103 aa20.25■□□□□ 0.83
LIPA-202ENST00000336233 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
LIPA-202ENST00000336233 ABCC5O15440 1437 aa20.24■□□□□ 0.83
LIPA-202ENST00000336233 TROQ12816 1431 aaPredicted RBP20.23■□□□□ 0.83
LIPA-202ENST00000336233 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
LIPA-202ENST00000336233 BCL11AQ9H165 835 aa20.21■□□□□ 0.83
LIPA-202ENST00000336233 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms