RNA–Protein interactions for RNA: ENST00000335464.9

TMEM104-201, Transcript of transmembrane protein 104, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM104, Length 4,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-201ENST00000335464 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
TMEM104-201ENST00000335464 SETD5Q9C0A6 1442 aa19.39■□□□□ 0.69
TMEM104-201ENST00000335464 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
TMEM104-201ENST00000335464 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
TMEM104-201ENST00000335464 MYT1LQ9UL68 1186 aa19.35■□□□□ 0.69
TMEM104-201ENST00000335464 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
TMEM104-201ENST00000335464 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
TMEM104-201ENST00000335464 RBM19Q9Y4C8 960 aaKnown RBP19.33■□□□□ 0.69
TMEM104-201ENST00000335464 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
TMEM104-201ENST00000335464 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
TMEM104-201ENST00000335464 CCDC136Q96JN2 1154 aa19.31■□□□□ 0.68
TMEM104-201ENST00000335464 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
TMEM104-201ENST00000335464 NBR1Q14596 966 aa19.29■□□□□ 0.68
TMEM104-201ENST00000335464 CUX2O14529 1486 aa19.28■□□□□ 0.68
TMEM104-201ENST00000335464 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.68
TMEM104-201ENST00000335464 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
TMEM104-201ENST00000335464 KIF21BO75037 1637 aa19.23■□□□□ 0.67
TMEM104-201ENST00000335464 PPP4R2Q9NY27 417 aa19.22■□□□□ 0.67
TMEM104-201ENST00000335464 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
TMEM104-201ENST00000335464 BCL11AQ9H165 835 aa19.2■□□□□ 0.66
TMEM104-201ENST00000335464 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
TMEM104-201ENST00000335464 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
TMEM104-201ENST00000335464 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
TMEM104-201ENST00000335464 ARHGAP35Q9NRY4 1499 aa19.18■□□□□ 0.66
TMEM104-201ENST00000335464 SALL2Q9Y467 1007 aaPredicted RBP19.17■□□□□ 0.66
TMEM104-201ENST00000335464 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
TMEM104-201ENST00000335464 FBLN2P98095 1184 aa19.13■□□□□ 0.65
TMEM104-201ENST00000335464 B4GALNT3Q6L9W6 998 aa19.13■□□□□ 0.65
TMEM104-201ENST00000335464 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
TMEM104-201ENST00000335464 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
TMEM104-201ENST00000335464 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
TMEM104-201ENST00000335464 KDM2AQ9Y2K7 1162 aa19.04■□□□□ 0.64
TMEM104-201ENST00000335464 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
TMEM104-201ENST00000335464 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.64
TMEM104-201ENST00000335464 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
TMEM104-201ENST00000335464 ARAP1Q96P48 1450 aa19■□□□□ 0.63
TMEM104-201ENST00000335464 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
TMEM104-201ENST00000335464 CANXP27824 592 aaKnown RBP18.98■□□□□ 0.63
TMEM104-201ENST00000335464 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
TMEM104-201ENST00000335464 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
TMEM104-201ENST00000335464 FOXD1Q16676 465 aa18.93■□□□□ 0.62
TMEM104-201ENST00000335464 DEKP35659 375 aaKnown RBP18.92■□□□□ 0.62
TMEM104-201ENST00000335464 PHLDB1Q86UU1 1377 aa18.92■□□□□ 0.62
TMEM104-201ENST00000335464 TSPY4P0CV99 314 aa18.91■□□□□ 0.62
TMEM104-201ENST00000335464 TSPY10P0CW01 314 aa18.91■□□□□ 0.62
TMEM104-201ENST00000335464 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
TMEM104-201ENST00000335464 CARD11Q9BXL7 1154 aa18.89■□□□□ 0.62
TMEM104-201ENST00000335464 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
TMEM104-201ENST00000335464 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
TMEM104-201ENST00000335464 IGF1RP08069 1367 aa18.88■□□□□ 0.61
TMEM104-201ENST00000335464 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
TMEM104-201ENST00000335464 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
TMEM104-201ENST00000335464 CCDC18Q5T9S5 1454 aa18.87■□□□□ 0.61
TMEM104-201ENST00000335464 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
TMEM104-201ENST00000335464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
TMEM104-201ENST00000335464 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
TMEM104-201ENST00000335464 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
TMEM104-201ENST00000335464 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.84■□□□□ 0.61
TMEM104-201ENST00000335464 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.6
TMEM104-201ENST00000335464 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
TMEM104-201ENST00000335464 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
TMEM104-201ENST00000335464 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
TMEM104-201ENST00000335464 EIF5BO60841 1220 aaKnown RBP18.81■□□□□ 0.6
TMEM104-201ENST00000335464 PRKRIP1Q9H875 184 aaPredicted RBP18.78■□□□□ 0.6
TMEM104-201ENST00000335464 NEFMP07197 916 aa18.77■□□□□ 0.6
TMEM104-201ENST00000335464 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
TMEM104-201ENST00000335464 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
TMEM104-201ENST00000335464 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
TMEM104-201ENST00000335464 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
TMEM104-201ENST00000335464 WDR97A6NE52 1622 aa18.76■□□□□ 0.59
TMEM104-201ENST00000335464 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
TMEM104-201ENST00000335464 UACAQ9BZF9 1416 aa18.73■□□□□ 0.59
TMEM104-201ENST00000335464 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
TMEM104-201ENST00000335464 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
TMEM104-201ENST00000335464 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
TMEM104-201ENST00000335464 PLEKHD1A6NEE1 506 aa18.73■□□□□ 0.59
TMEM104-201ENST00000335464 UPF2Q9HAU5 1272 aaKnown RBP18.72■□□□□ 0.59
TMEM104-201ENST00000335464 TIAM1Q13009 1591 aa18.71■□□□□ 0.58
TMEM104-201ENST00000335464 PKD2Q13563 968 aa18.7■□□□□ 0.58
TMEM104-201ENST00000335464 RTN4Q9NQC3 1192 aaKnown RBP18.7■□□□□ 0.58
TMEM104-201ENST00000335464 CUX1P39880 1505 aa18.69■□□□□ 0.58
TMEM104-201ENST00000335464 IPO9Q96P70 1041 aaKnown RBP18.69■□□□□ 0.58
TMEM104-201ENST00000335464 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
TMEM104-201ENST00000335464 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
TMEM104-201ENST00000335464 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
TMEM104-201ENST00000335464 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
TMEM104-201ENST00000335464 RCAN3Q9UKA8 241 aa18.65■□□□□ 0.58
TMEM104-201ENST00000335464 CASKIN1Q8WXD9 1431 aa18.64■□□□□ 0.58
TMEM104-201ENST00000335464 MYOM3Q5VTT5 1437 aa18.63■□□□□ 0.57
TMEM104-201ENST00000335464 CNTLNQ9NXG0 1405 aa18.63■□□□□ 0.57
TMEM104-201ENST00000335464 KNSTRNQ9Y448 316 aa18.62■□□□□ 0.57
TMEM104-201ENST00000335464 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
TMEM104-201ENST00000335464 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
TMEM104-201ENST00000335464 CCDC7Q96M83 1385 aa18.62■□□□□ 0.57
TMEM104-201ENST00000335464 CFTRP13569 1480 aa18.61■□□□□ 0.57
TMEM104-201ENST00000335464 RGS3P49796 1198 aa18.6■□□□□ 0.57
TMEM104-201ENST00000335464 RALBP1Q15311 655 aa18.6■□□□□ 0.57
TMEM104-201ENST00000335464 FYCO1Q9BQS8 1478 aa18.6■□□□□ 0.57
TMEM104-201ENST00000335464 ARXQ96QS3 562 aa18.6■□□□□ 0.57
TMEM104-201ENST00000335464 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms