RNA–Protein interactions for RNA: ENST00000335464.9

TMEM104-201, Transcript of transmembrane protein 104, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM104, Length 4,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-201ENST00000335464 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
TMEM104-201ENST00000335464 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
TMEM104-201ENST00000335464 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
TMEM104-201ENST00000335464 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
TMEM104-201ENST00000335464 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
TMEM104-201ENST00000335464 HRCP23327 699 aa22.6■■□□□ 1.21
TMEM104-201ENST00000335464 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
TMEM104-201ENST00000335464 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
TMEM104-201ENST00000335464 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
TMEM104-201ENST00000335464 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
TMEM104-201ENST00000335464 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
TMEM104-201ENST00000335464 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
TMEM104-201ENST00000335464 TRIM26Q12899 539 aaPredicted RBP22.14■■□□□ 1.13
TMEM104-201ENST00000335464 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
TMEM104-201ENST00000335464 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
TMEM104-201ENST00000335464 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
TMEM104-201ENST00000335464 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
TMEM104-201ENST00000335464 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
TMEM104-201ENST00000335464 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.07
TMEM104-201ENST00000335464 APLP2Q06481 763 aa21.63■■□□□ 1.05
TMEM104-201ENST00000335464 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
TMEM104-201ENST00000335464 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
TMEM104-201ENST00000335464 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
TMEM104-201ENST00000335464 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
TMEM104-201ENST00000335464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
TMEM104-201ENST00000335464 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
TMEM104-201ENST00000335464 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
TMEM104-201ENST00000335464 MYT1Q01538 1121 aa21.26■□□□□ 0.99
TMEM104-201ENST00000335464 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
TMEM104-201ENST00000335464 HNRNPUL2Q1KMD3 747 aaKnown RBP21.05■□□□□ 0.96
TMEM104-201ENST00000335464 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
TMEM104-201ENST00000335464 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
TMEM104-201ENST00000335464 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
TMEM104-201ENST00000335464 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
TMEM104-201ENST00000335464 ABCC9O60706 1549 aa20.83■□□□□ 0.93
TMEM104-201ENST00000335464 ZNF316A6NFI3 1004 aaPredicted RBP20.81■□□□□ 0.92
TMEM104-201ENST00000335464 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
TMEM104-201ENST00000335464 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
TMEM104-201ENST00000335464 NEFLP07196 543 aa20.73■□□□□ 0.91
TMEM104-201ENST00000335464 ATP1B4Q9UN42 357 aaPredicted RBP20.73■□□□□ 0.91
TMEM104-201ENST00000335464 ITGAEP38570 1179 aa20.7■□□□□ 0.9
TMEM104-201ENST00000335464 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
TMEM104-201ENST00000335464 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
TMEM104-201ENST00000335464 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
TMEM104-201ENST00000335464 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
TMEM104-201ENST00000335464 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
TMEM104-201ENST00000335464 MIER1Q8N108 512 aa20.35■□□□□ 0.85
TMEM104-201ENST00000335464 BCANQ96GW7 911 aa20.31■□□□□ 0.84
TMEM104-201ENST00000335464 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
TMEM104-201ENST00000335464 FAM50AQ14320 339 aaKnown RBP20.25■□□□□ 0.83
TMEM104-201ENST00000335464 TNIKQ9UKE5 1360 aa20.21■□□□□ 0.83
TMEM104-201ENST00000335464 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
TMEM104-201ENST00000335464 EEA1Q15075 1411 aa20.19■□□□□ 0.82
TMEM104-201ENST00000335464 GOLGA3Q08378 1498 aa20.17■□□□□ 0.82
TMEM104-201ENST00000335464 CLIP1P30622 1438 aa20.16■□□□□ 0.82
TMEM104-201ENST00000335464 NACADO15069 1562 aa20.14■□□□□ 0.82
TMEM104-201ENST00000335464 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
TMEM104-201ENST00000335464 ANP32CO43423 234 aa20.1■□□□□ 0.81
TMEM104-201ENST00000335464 SOGA1O94964 1423 aa20.04■□□□□ 0.8
TMEM104-201ENST00000335464 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
TMEM104-201ENST00000335464 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
TMEM104-201ENST00000335464 FKBP8Q14318 412 aa20■□□□□ 0.79
TMEM104-201ENST00000335464 POLR3GLQ9BT43 218 aa19.98■□□□□ 0.79
TMEM104-201ENST00000335464 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
TMEM104-201ENST00000335464 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
TMEM104-201ENST00000335464 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
TMEM104-201ENST00000335464 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
TMEM104-201ENST00000335464 CNGB1Q14028 1251 aaPredicted RBP19.94■□□□□ 0.78
TMEM104-201ENST00000335464 WIZO95785 1651 aa19.94■□□□□ 0.78
TMEM104-201ENST00000335464 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
TMEM104-201ENST00000335464 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
TMEM104-201ENST00000335464 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
TMEM104-201ENST00000335464 SUPT16HQ9Y5B9 1047 aaKnown RBP19.8■□□□□ 0.76
TMEM104-201ENST00000335464 VPS8Q8N3P4 1428 aa19.77■□□□□ 0.76
TMEM104-201ENST00000335464 TONSLQ96HA7 1378 aa19.77■□□□□ 0.75
TMEM104-201ENST00000335464 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
TMEM104-201ENST00000335464 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
TMEM104-201ENST00000335464 HNRNPUQ00839 825 aaKnown RBP eCLIP19.71■□□□□ 0.75
TMEM104-201ENST00000335464 RTL5Q5HYW3 569 aaPredicted RBP19.69■□□□□ 0.74
TMEM104-201ENST00000335464 ANP32EQ9BTT0 268 aa19.66■□□□□ 0.74
TMEM104-201ENST00000335464 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
TMEM104-201ENST00000335464 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
TMEM104-201ENST00000335464 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
TMEM104-201ENST00000335464 CCNB3Q8WWL7 1395 aa19.6■□□□□ 0.73
TMEM104-201ENST00000335464 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
TMEM104-201ENST00000335464 KIF27Q86VH2 1401 aa19.58■□□□□ 0.73
TMEM104-201ENST00000335464 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.72
TMEM104-201ENST00000335464 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
TMEM104-201ENST00000335464 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
TMEM104-201ENST00000335464 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
TMEM104-201ENST00000335464 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
TMEM104-201ENST00000335464 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
TMEM104-201ENST00000335464 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
TMEM104-201ENST00000335464 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
TMEM104-201ENST00000335464 MTUS2Q5JR59 1369 aa19.46■□□□□ 0.71
TMEM104-201ENST00000335464 TSHZ2Q9NRE2 1034 aa19.46■□□□□ 0.71
TMEM104-201ENST00000335464 CHIC2Q9UKJ5 165 aa19.46■□□□□ 0.71
TMEM104-201ENST00000335464 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
TMEM104-201ENST00000335464 ANP32AP39687 249 aaKnown RBP19.45■□□□□ 0.7
TMEM104-201ENST00000335464 MRS2Q9HD23 443 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms