RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 KIAA0586Q9BVV6 1533 aa24.72■■□□□ 1.55
CMC1-201ENST00000334841 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
CMC1-201ENST00000334841 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
CMC1-201ENST00000334841 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
CMC1-201ENST00000334841 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
CMC1-201ENST00000334841 SHROOM2Q13796 1616 aa24.64■■□□□ 1.53
CMC1-201ENST00000334841 TNIKQ9UKE5 1360 aa24.63■■□□□ 1.53
CMC1-201ENST00000334841 UGGT2Q9NYU1 1516 aa24.59■■□□□ 1.53
CMC1-201ENST00000334841 SAMD9Q5K651 1589 aa24.51■■□□□ 1.51
CMC1-201ENST00000334841 JPH4Q96JJ6 628 aa24.51■■□□□ 1.51
CMC1-201ENST00000334841 DISP1Q96F81 1524 aa24.5■■□□□ 1.51
CMC1-201ENST00000334841 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
CMC1-201ENST00000334841 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
CMC1-201ENST00000334841 PRG4Q92954 1404 aaPredicted RBP24.48■■□□□ 1.51
CMC1-201ENST00000334841 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
CMC1-201ENST00000334841 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
CMC1-201ENST00000334841 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.5
CMC1-201ENST00000334841 ARHGAP35Q9NRY4 1499 aa24.44■■□□□ 1.5
CMC1-201ENST00000334841 CLIP1P30622 1438 aa24.44■■□□□ 1.5
CMC1-201ENST00000334841 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
CMC1-201ENST00000334841 CARMIL2Q6F5E8 1435 aa24.4■■□□□ 1.5
CMC1-201ENST00000334841 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
CMC1-201ENST00000334841 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
CMC1-201ENST00000334841 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
CMC1-201ENST00000334841 FHOD3Q2V2M9 1422 aa24.35■■□□□ 1.49
CMC1-201ENST00000334841 ARAP1Q96P48 1450 aa24.34■■□□□ 1.49
CMC1-201ENST00000334841 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
CMC1-201ENST00000334841 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
CMC1-201ENST00000334841 PTPRGP23470 1445 aa24.23■■□□□ 1.47
CMC1-201ENST00000334841 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
CMC1-201ENST00000334841 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
CMC1-201ENST00000334841 ABCA8O94911 1581 aa24.17■■□□□ 1.46
CMC1-201ENST00000334841 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
CMC1-201ENST00000334841 PLB1Q6P1J6 1458 aa24.16■■□□□ 1.46
CMC1-201ENST00000334841 RAPGEF6Q8TEU7 1601 aa24.14■■□□□ 1.46
CMC1-201ENST00000334841 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
CMC1-201ENST00000334841 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
CMC1-201ENST00000334841 ABCC2Q92887 1545 aa24.1■■□□□ 1.45
CMC1-201ENST00000334841 ADCY10Q96PN6 1610 aa24.1■■□□□ 1.45
CMC1-201ENST00000334841 UHRF1BP1LA0JNW5 1464 aa24.08■■□□□ 1.45
CMC1-201ENST00000334841 FYCO1Q9BQS8 1478 aa24.08■■□□□ 1.45
CMC1-201ENST00000334841 HECW1Q76N89 1606 aa24.08■■□□□ 1.45
CMC1-201ENST00000334841 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.44
CMC1-201ENST00000334841 NUP153P49790 1475 aaKnown RBP24.06■■□□□ 1.44
CMC1-201ENST00000334841 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
CMC1-201ENST00000334841 LRRIQ1Q96JM4 1722 aa24.03■■□□□ 1.44
CMC1-201ENST00000334841 KDM5BQ9UGL1 1544 aa23.97■■□□□ 1.43
CMC1-201ENST00000334841 ZCCHC11Q5TAX3 1644 aaKnown RBP23.96■■□□□ 1.43
CMC1-201ENST00000334841 EPRSP07814 1512 aaKnown RBP23.96■■□□□ 1.43
CMC1-201ENST00000334841 CDK13Q14004 1512 aaKnown RBP23.96■■□□□ 1.43
CMC1-201ENST00000334841 ATP10BO94823 1461 aa23.94■■□□□ 1.42
CMC1-201ENST00000334841 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
CMC1-201ENST00000334841 CFAP43Q8NDM7 1665 aa23.93■■□□□ 1.42
CMC1-201ENST00000334841 ATP1B4Q9UN42 357 aaPredicted RBP23.93■■□□□ 1.42
CMC1-201ENST00000334841 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
CMC1-201ENST00000334841 TIAM1Q13009 1591 aa23.89■■□□□ 1.41
CMC1-201ENST00000334841 MAP3K1Q13233 1512 aa23.84■■□□□ 1.41
CMC1-201ENST00000334841 MAGI3Q5TCQ9 1506 aa23.83■■□□□ 1.41
CMC1-201ENST00000334841 MAPKBP1O60336 1514 aa23.82■■□□□ 1.4
CMC1-201ENST00000334841 ASXL2Q76L83 1435 aa23.78■■□□□ 1.4
CMC1-201ENST00000334841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
CMC1-201ENST00000334841 NPM1P06748 294 aaKnown RBP eCLIP23.78■■□□□ 1.4
CMC1-201ENST00000334841 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
CMC1-201ENST00000334841 WDR7Q9Y4E6 1490 aa23.76■■□□□ 1.39
CMC1-201ENST00000334841 EHBP1L1Q8N3D4 1523 aa23.75■■□□□ 1.39
CMC1-201ENST00000334841 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
CMC1-201ENST00000334841 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
CMC1-201ENST00000334841 APLP2Q06481 763 aa23.72■■□□□ 1.39
CMC1-201ENST00000334841 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.38
CMC1-201ENST00000334841 KIF14Q15058 1648 aa23.7■■□□□ 1.38
CMC1-201ENST00000334841 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
CMC1-201ENST00000334841 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
CMC1-201ENST00000334841 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
CMC1-201ENST00000334841 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
CMC1-201ENST00000334841 SUPT6HQ7KZ85 1726 aaKnown RBP23.63■■□□□ 1.37
CMC1-201ENST00000334841 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
CMC1-201ENST00000334841 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
CMC1-201ENST00000334841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.6■■□□□ 1.372e-9■□□□□ 11.3
CMC1-201ENST00000334841 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
CMC1-201ENST00000334841 NCOA2Q15596 1464 aa23.59■■□□□ 1.37
CMC1-201ENST00000334841 GLI2P10070 1586 aa23.58■■□□□ 1.37
CMC1-201ENST00000334841 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
CMC1-201ENST00000334841 KCNH8Q96L42 1107 aa23.58■■□□□ 1.37
CMC1-201ENST00000334841 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
CMC1-201ENST00000334841 MAP3K4Q9Y6R4 1608 aa23.53■■□□□ 1.36
CMC1-201ENST00000334841 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
CMC1-201ENST00000334841 MYO5CQ9NQX4 1742 aa23.5■■□□□ 1.35
CMC1-201ENST00000334841 PREX2Q70Z35 1606 aa23.49■■□□□ 1.35
CMC1-201ENST00000334841 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
CMC1-201ENST00000334841 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
CMC1-201ENST00000334841 FAM69CQ0P6D2 419 aa23.47■■□□□ 1.35
CMC1-201ENST00000334841 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
CMC1-201ENST00000334841 CCNB3Q8WWL7 1395 aa23.45■■□□□ 1.34
CMC1-201ENST00000334841 MYOM3Q5VTT5 1437 aa23.44■■□□□ 1.34
CMC1-201ENST00000334841 CDC42BPBQ9Y5S2 1711 aa23.44■■□□□ 1.34
CMC1-201ENST00000334841 CD109Q6YHK3 1445 aa23.43■■□□□ 1.34
CMC1-201ENST00000334841 PPRC1Q5VV67 1664 aaKnown RBP23.43■■□□□ 1.34
CMC1-201ENST00000334841 ARAP3Q8WWN8 1544 aa23.43■■□□□ 1.34
CMC1-201ENST00000334841 PLCH2O75038 1416 aa23.42■■□□□ 1.34
CMC1-201ENST00000334841 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms