RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
LIMK2-202ENST00000333611 IL27Q8NEV9 243 aa16.62■□□□□ 0.25
LIMK2-202ENST00000333611 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
LIMK2-202ENST00000333611 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
LIMK2-202ENST00000333611 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
LIMK2-202ENST00000333611 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
LIMK2-202ENST00000333611 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
LIMK2-202ENST00000333611 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
LIMK2-202ENST00000333611 ANP32CO43423 234 aa16.47■□□□□ 0.23
LIMK2-202ENST00000333611 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
LIMK2-202ENST00000333611 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
LIMK2-202ENST00000333611 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
LIMK2-202ENST00000333611 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
LIMK2-202ENST00000333611 TIMELESSQ9UNS1 1208 aa16.41■□□□□ 0.22
LIMK2-202ENST00000333611 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
LIMK2-202ENST00000333611 PRXQ9BXM0 1461 aa16.4■□□□□ 0.22
LIMK2-202ENST00000333611 UBE2Q2Q8WVN8 375 aa16.4■□□□□ 0.22
LIMK2-202ENST00000333611 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
LIMK2-202ENST00000333611 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
LIMK2-202ENST00000333611 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
LIMK2-202ENST00000333611 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
LIMK2-202ENST00000333611 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
LIMK2-202ENST00000333611 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
LIMK2-202ENST00000333611 PKNOX2Q96KN3 472 aa16.36■□□□□ 0.21
LIMK2-202ENST00000333611 CUX2O14529 1486 aa16.35■□□□□ 0.21
LIMK2-202ENST00000333611 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
LIMK2-202ENST00000333611 FANCIQ9NVI1 1328 aa16.33■□□□□ 0.21
LIMK2-202ENST00000333611 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.2
LIMK2-202ENST00000333611 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
LIMK2-202ENST00000333611 PHLDB1Q86UU1 1377 aa16.32■□□□□ 0.2
LIMK2-202ENST00000333611 ARID3CA6NKF2 412 aa16.32■□□□□ 0.2
LIMK2-202ENST00000333611 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
LIMK2-202ENST00000333611 CUX1P39880 1505 aa16.31■□□□□ 0.2
LIMK2-202ENST00000333611 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
LIMK2-202ENST00000333611 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
LIMK2-202ENST00000333611 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
LIMK2-202ENST00000333611 ANP32AP39687 249 aaKnown RBP16.29■□□□□ 0.2
LIMK2-202ENST00000333611 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-202ENST00000333611 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
LIMK2-202ENST00000333611 CARMIL1Q5VZK9 1371 aa16.28■□□□□ 0.2
LIMK2-202ENST00000333611 PPP1R15AO75807 674 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-202ENST00000333611 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
LIMK2-202ENST00000333611 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.19
LIMK2-202ENST00000333611 POLR3GLQ9BT43 218 aa16.25■□□□□ 0.19
LIMK2-202ENST00000333611 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
LIMK2-202ENST00000333611 IGF1RP08069 1367 aa16.24■□□□□ 0.19
LIMK2-202ENST00000333611 RRP7BPQ9NSQ0 103 aa16.22■□□□□ 0.19
LIMK2-202ENST00000333611 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
LIMK2-202ENST00000333611 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
LIMK2-202ENST00000333611 NEFMP07197 916 aa16.21■□□□□ 0.18
LIMK2-202ENST00000333611 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
LIMK2-202ENST00000333611 LRRC9Q6ZRR7 1453 aa16.18■□□□□ 0.18
LIMK2-202ENST00000333611 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
LIMK2-202ENST00000333611 BIVM-ERCC5R4GMW8 1640 aa16.17■□□□□ 0.18
LIMK2-202ENST00000333611 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
LIMK2-202ENST00000333611 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
LIMK2-202ENST00000333611 TIAM1Q13009 1591 aa16.14■□□□□ 0.17
LIMK2-202ENST00000333611 FOXD1Q16676 465 aa16.14■□□□□ 0.17
LIMK2-202ENST00000333611 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.17
LIMK2-202ENST00000333611 ARXQ96QS3 562 aa16.13■□□□□ 0.17
LIMK2-202ENST00000333611 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
LIMK2-202ENST00000333611 HSPA5P11021 654 aaKnown RBP16.1■□□□□ 0.17
LIMK2-202ENST00000333611 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
LIMK2-202ENST00000333611 GLIPR1L2Q4G1C9 344 aa16.09■□□□□ 0.17
LIMK2-202ENST00000333611 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
LIMK2-202ENST00000333611 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
LIMK2-202ENST00000333611 CCDC184Q52MB2 194 aa16.07■□□□□ 0.16
LIMK2-202ENST00000333611 CFTRP13569 1480 aa16.07■□□□□ 0.16
LIMK2-202ENST00000333611 A0A0U1RQG5 324 aaPredicted RBP16.06■□□□□ 0.16
LIMK2-202ENST00000333611 PPP4R2Q9NY27 417 aa16.06■□□□□ 0.16
LIMK2-202ENST00000333611 ARID4BQ4LE39 1312 aaPredicted RBP16.05■□□□□ 0.16
LIMK2-202ENST00000333611 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
LIMK2-202ENST00000333611 RAD54L2Q9Y4B4 1467 aa16.04■□□□□ 0.16
LIMK2-202ENST00000333611 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
LIMK2-202ENST00000333611 EIF4G2P78344 907 aaKnown RBP eCLIP16.03■□□□□ 0.16
LIMK2-202ENST00000333611 PCF11O94913 1555 aaKnown RBP16.03■□□□□ 0.16
LIMK2-202ENST00000333611 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.15
LIMK2-202ENST00000333611 IPO9Q96P70 1041 aaKnown RBP16.01■□□□□ 0.15
LIMK2-202ENST00000333611 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
LIMK2-202ENST00000333611 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
LIMK2-202ENST00000333611 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
LIMK2-202ENST00000333611 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
LIMK2-202ENST00000333611 L3MBTL2Q969R5 705 aa15.96■□□□□ 0.14
LIMK2-202ENST00000333611 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
LIMK2-202ENST00000333611 ZMYND15Q9H091 742 aa15.95■□□□□ 0.14
LIMK2-202ENST00000333611 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
LIMK2-202ENST00000333611 C11orf95C9JLR9 678 aaPredicted RBP15.92■□□□□ 0.14
LIMK2-202ENST00000333611 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.143e-8■■■■■ 62
LIMK2-202ENST00000333611 NAP1L5Q96NT1 182 aaPredicted RBP15.91■□□□□ 0.14
LIMK2-202ENST00000333611 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
LIMK2-202ENST00000333611 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
LIMK2-202ENST00000333611 CASKIN1Q8WXD9 1431 aa15.89■□□□□ 0.13
LIMK2-202ENST00000333611 MAP3K1Q13233 1512 aa15.88■□□□□ 0.13
LIMK2-202ENST00000333611 ZNF777Q9ULD5 760 aaPredicted RBP15.88■□□□□ 0.13
LIMK2-202ENST00000333611 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
LIMK2-202ENST00000333611 SLC4A3P48751 1232 aa15.88■□□□□ 0.13
LIMK2-202ENST00000333611 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
LIMK2-202ENST00000333611 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
LIMK2-202ENST00000333611 FMN1Q68DA7 1419 aa15.88■□□□□ 0.13
LIMK2-202ENST00000333611 NAIPQ13075 1403 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms