RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 ARHGAP35Q9NRY4 1499 aa13.23□□□□□ -0.29
COPB2-201ENST00000333188 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
COPB2-201ENST00000333188 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
COPB2-201ENST00000333188 RRP7BPQ9NSQ0 103 aa13.22□□□□□ -0.29
COPB2-201ENST00000333188 GAPVD1Q14C86 1478 aa13.21□□□□□ -0.3
COPB2-201ENST00000333188 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
COPB2-201ENST00000333188 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
COPB2-201ENST00000333188 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
COPB2-201ENST00000333188 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
COPB2-201ENST00000333188 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
COPB2-201ENST00000333188 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
COPB2-201ENST00000333188 DNMBPQ6XZF7 1577 aa13.13□□□□□ -0.31
COPB2-201ENST00000333188 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
COPB2-201ENST00000333188 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
COPB2-201ENST00000333188 KCNH8Q96L42 1107 aa13.09□□□□□ -0.31
COPB2-201ENST00000333188 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
COPB2-201ENST00000333188 FOXD1Q16676 465 aa13.08□□□□□ -0.32
COPB2-201ENST00000333188 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
COPB2-201ENST00000333188 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
COPB2-201ENST00000333188 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
COPB2-201ENST00000333188 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
COPB2-201ENST00000333188 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
COPB2-201ENST00000333188 MIER1Q8N108 512 aa13.06□□□□□ -0.32
COPB2-201ENST00000333188 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
COPB2-201ENST00000333188 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
COPB2-201ENST00000333188 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
COPB2-201ENST00000333188 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
COPB2-201ENST00000333188 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
COPB2-201ENST00000333188 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
COPB2-201ENST00000333188 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
COPB2-201ENST00000333188 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
COPB2-201ENST00000333188 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
COPB2-201ENST00000333188 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
COPB2-201ENST00000333188 DDX10Q13206 875 aaKnown RBP12.98□□□□□ -0.33
COPB2-201ENST00000333188 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
COPB2-201ENST00000333188 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.34
COPB2-201ENST00000333188 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
COPB2-201ENST00000333188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.346e-7■■■■□ 21.7
COPB2-201ENST00000333188 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
COPB2-201ENST00000333188 PCF11O94913 1555 aaKnown RBP12.93□□□□□ -0.34
COPB2-201ENST00000333188 SETD5Q9C0A6 1442 aa12.93□□□□□ -0.34
COPB2-201ENST00000333188 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
COPB2-201ENST00000333188 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
COPB2-201ENST00000333188 CDK13Q14004 1512 aaKnown RBP12.9□□□□□ -0.35
COPB2-201ENST00000333188 TONSLQ96HA7 1378 aa12.89□□□□□ -0.35
COPB2-201ENST00000333188 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
COPB2-201ENST00000333188 TIAM1Q13009 1591 aa12.89□□□□□ -0.35
COPB2-201ENST00000333188 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
COPB2-201ENST00000333188 HNRNPMP52272 730 aaKnown RBP eCLIP12.88□□□□□ -0.35
COPB2-201ENST00000333188 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
COPB2-201ENST00000333188 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
COPB2-201ENST00000333188 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
COPB2-201ENST00000333188 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
COPB2-201ENST00000333188 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
COPB2-201ENST00000333188 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
COPB2-201ENST00000333188 FGD6Q6ZV73 1430 aa12.85□□□□□ -0.35
COPB2-201ENST00000333188 PRG4Q92954 1404 aaPredicted RBP12.84□□□□□ -0.35
COPB2-201ENST00000333188 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
COPB2-201ENST00000333188 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
COPB2-201ENST00000333188 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
COPB2-201ENST00000333188 PLB1Q6P1J6 1458 aa12.84□□□□□ -0.35
COPB2-201ENST00000333188 FYCO1Q9BQS8 1478 aa12.82□□□□□ -0.36
COPB2-201ENST00000333188 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
COPB2-201ENST00000333188 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
COPB2-201ENST00000333188 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
COPB2-201ENST00000333188 CUL7Q14999 1698 aa12.8□□□□□ -0.36
COPB2-201ENST00000333188 PTPRKQ15262 1439 aa12.8□□□□□ -0.36
COPB2-201ENST00000333188 MPHOSPH9Q99550 1183 aa12.8□□□□□ -0.36
COPB2-201ENST00000333188 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
COPB2-201ENST00000333188 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
COPB2-201ENST00000333188 PTPRGP23470 1445 aa12.79□□□□□ -0.36
COPB2-201ENST00000333188 IQGAP2Q13576 1575 aa12.78□□□□□ -0.36
COPB2-201ENST00000333188 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
COPB2-201ENST00000333188 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
COPB2-201ENST00000333188 EFCAB5A4FU69 1503 aa12.76□□□□□ -0.37
COPB2-201ENST00000333188 EPRSP07814 1512 aaKnown RBP12.76□□□□□ -0.37
COPB2-201ENST00000333188 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
COPB2-201ENST00000333188 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
COPB2-201ENST00000333188 PKD2Q13563 968 aa12.74□□□□□ -0.37
COPB2-201ENST00000333188 CCDC18Q5T9S5 1454 aa12.74□□□□□ -0.37
COPB2-201ENST00000333188 L3MBTL2Q969R5 705 aa12.73□□□□□ -0.37
COPB2-201ENST00000333188 EIF4G3O43432 1585 aaKnown RBP12.73□□□□□ -0.37
COPB2-201ENST00000333188 CLSPNQ9HAW4 1339 aa12.73□□□□□ -0.37
COPB2-201ENST00000333188 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
COPB2-201ENST00000333188 THOC2Q8NI27 1593 aaKnown RBP12.72□□□□□ -0.37
COPB2-201ENST00000333188 BCANQ96GW7 911 aa12.7□□□□□ -0.38
COPB2-201ENST00000333188 ADAMTS12P58397 1594 aa12.7□□□□□ -0.38
COPB2-201ENST00000333188 WDR62O43379 1518 aa12.7□□□□□ -0.38
COPB2-201ENST00000333188 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
COPB2-201ENST00000333188 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
COPB2-201ENST00000333188 ANP32CO43423 234 aa12.69□□□□□ -0.38
COPB2-201ENST00000333188 MAGI3Q5TCQ9 1506 aa12.69□□□□□ -0.38
COPB2-201ENST00000333188 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
COPB2-201ENST00000333188 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
COPB2-201ENST00000333188 NUP155O75694 1391 aa12.67□□□□□ -0.38
COPB2-201ENST00000333188 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
COPB2-201ENST00000333188 NAIPQ13075 1403 aa12.66□□□□□ -0.38
COPB2-201ENST00000333188 NUP153P49790 1475 aaKnown RBP12.66□□□□□ -0.38
COPB2-201ENST00000333188 HSPA5P11021 654 aaKnown RBP12.65□□□□□ -0.38
COPB2-201ENST00000333188 CYB5RLQ6IPT4 315 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms