RNA–Protein interactions for RNA: ENST00000333175.9

TMEM259-201, Transcript of transmembrane protein 259, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM259, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-201ENST00000333175 PCF11O94913 1555 aaKnown RBP32.7■■■□□ 2.83
TMEM259-201ENST00000333175 CUL7Q14999 1698 aa32.69■■■□□ 2.82
TMEM259-201ENST00000333175 WDR97A6NE52 1622 aa32.68■■■□□ 2.82
TMEM259-201ENST00000333175 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
TMEM259-201ENST00000333175 FHAD1B1AJZ9 1412 aa32.66■■■□□ 2.82
TMEM259-201ENST00000333175 LRRC9Q6ZRR7 1453 aa32.66■■■□□ 2.82
TMEM259-201ENST00000333175 KIF21AQ7Z4S6 1674 aa32.66■■■□□ 2.82
TMEM259-201ENST00000333175 MAP3K1Q13233 1512 aa32.63■■■□□ 2.81
TMEM259-201ENST00000333175 SCAF1Q9H7N4 1312 aaKnown RBP32.63■■■□□ 2.81
TMEM259-201ENST00000333175 CTTNBP2Q8WZ74 1663 aa32.61■■■□□ 2.81
TMEM259-201ENST00000333175 PHLDB1Q86UU1 1377 aa32.59■■■□□ 2.81
TMEM259-201ENST00000333175 ABCA5Q8WWZ7 1642 aa32.58■■■□□ 2.81
TMEM259-201ENST00000333175 GAPVD1Q14C86 1478 aa32.57■■■□□ 2.8
TMEM259-201ENST00000333175 CFAP43Q8NDM7 1665 aa32.56■■■□□ 2.8
TMEM259-201ENST00000333175 EFCAB5A4FU69 1503 aa32.53■■■□□ 2.8
TMEM259-201ENST00000333175 FAM50AQ14320 339 aaKnown RBP32.51■■■□□ 2.8
TMEM259-201ENST00000333175 CLSPNQ9HAW4 1339 aa32.51■■■□□ 2.79
TMEM259-201ENST00000333175 NEUROD1Q13562 356 aa32.48■■■□□ 2.79
TMEM259-201ENST00000333175 FYCO1Q9BQS8 1478 aa32.47■■■□□ 2.79
TMEM259-201ENST00000333175 RAB3GAP2Q9H2M9 1393 aa32.46■■■□□ 2.79
TMEM259-201ENST00000333175 CASKIN1Q8WXD9 1431 aa32.45■■■□□ 2.79
TMEM259-201ENST00000333175 ACIN1Q9UKV3 1341 aaKnown RBP32.42■■■□□ 2.78
TMEM259-201ENST00000333175 TARBP1Q13395 1621 aaKnown RBP32.4■■■□□ 2.78
TMEM259-201ENST00000333175 MIER1Q8N108 512 aa32.37■■■□□ 2.77
TMEM259-201ENST00000333175 AQRO60306 1485 aaKnown RBP eCLIP32.36■■■□□ 2.771e-11■■■■■ 37.1
TMEM259-201ENST00000333175 FMN1Q68DA7 1419 aa32.36■■■□□ 2.77
TMEM259-201ENST00000333175 SNAPC4Q5SXM2 1469 aa32.34■■■□□ 2.77
TMEM259-201ENST00000333175 SAMD9Q5K651 1589 aa32.31■■■□□ 2.76
TMEM259-201ENST00000333175 SETD5Q9C0A6 1442 aa32.31■■■□□ 2.76
TMEM259-201ENST00000333175 YTHDC1Q96MU7 727 aaKnown RBP32.3■■■□□ 2.76
TMEM259-201ENST00000333175 CENPBP07199 599 aaPredicted RBP32.28■■■□□ 2.76
TMEM259-201ENST00000333175 MAPKBP1O60336 1514 aa32.24■■■□□ 2.75
TMEM259-201ENST00000333175 PBRM1Q86U86 1689 aa32.23■■■□□ 2.75
TMEM259-201ENST00000333175 LRRIQ1Q96JM4 1722 aa32.23■■■□□ 2.75
TMEM259-201ENST00000333175 MTUS2Q5JR59 1369 aa32.23■■■□□ 2.75
TMEM259-201ENST00000333175 MRC2Q9UBG0 1479 aa32.22■■■□□ 2.75
TMEM259-201ENST00000333175 GRIN2BQ13224 1484 aa32.16■■■□□ 2.74
TMEM259-201ENST00000333175 FGD6Q6ZV73 1430 aa32.15■■■□□ 2.74
TMEM259-201ENST00000333175 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
TMEM259-201ENST00000333175 ZNF608Q9ULD9 1512 aaPredicted RBP32.1■■■□□ 2.73
TMEM259-201ENST00000333175 SIN3AQ96ST3 1273 aa32.09■■■□□ 2.73
TMEM259-201ENST00000333175 GTF3C3Q9Y5Q9 886 aa32.08■■■□□ 2.73
TMEM259-201ENST00000333175 NCOA2Q15596 1464 aa32.06■■■□□ 2.72
TMEM259-201ENST00000333175 IQGAP2Q13576 1575 aa32.04■■■□□ 2.72
TMEM259-201ENST00000333175 ARID3CA6NKF2 412 aa32.03■■■□□ 2.72
TMEM259-201ENST00000333175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.03■■■□□ 2.728e-7■■■■□ 19.5
TMEM259-201ENST00000333175 PTPRKQ15262 1439 aa32■■■□□ 2.71
TMEM259-201ENST00000333175 MAGI3Q5TCQ9 1506 aa31.99■■■□□ 2.71
TMEM259-201ENST00000333175 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
TMEM259-201ENST00000333175 MYOM3Q5VTT5 1437 aa31.97■■■□□ 2.71
TMEM259-201ENST00000333175 SUPT6HQ7KZ85 1726 aaKnown RBP31.96■■■□□ 2.71
TMEM259-201ENST00000333175 EHBP1L1Q8N3D4 1523 aa31.96■■■□□ 2.71
TMEM259-201ENST00000333175 IFT140Q96RY7 1462 aa31.96■■■□□ 2.71
TMEM259-201ENST00000333175 WDR62O43379 1518 aa31.94■■■□□ 2.7
TMEM259-201ENST00000333175 CDK13Q14004 1512 aaKnown RBP31.89■■■□□ 2.7
TMEM259-201ENST00000333175 HECW1Q76N89 1606 aa31.88■■■□□ 2.69
TMEM259-201ENST00000333175 CCDC18Q5T9S5 1454 aa31.88■■■□□ 2.69
TMEM259-201ENST00000333175 UGGT2Q9NYU1 1516 aa31.88■■■□□ 2.69
TMEM259-201ENST00000333175 EPRSP07814 1512 aaKnown RBP31.85■■■□□ 2.69
TMEM259-201ENST00000333175 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
TMEM259-201ENST00000333175 PTPN23Q9H3S7 1636 aa31.84■■■□□ 2.69
TMEM259-201ENST00000333175 HFM1A2PYH4 1435 aa31.83■■■□□ 2.69
TMEM259-201ENST00000333175 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
TMEM259-201ENST00000333175 ARHGEF11O15085 1522 aa31.81■■■□□ 2.68
TMEM259-201ENST00000333175 CHIC2Q9UKJ5 165 aa31.79■■■□□ 2.68
TMEM259-201ENST00000333175 NAIPQ13075 1403 aa31.78■■■□□ 2.68
TMEM259-201ENST00000333175 RRP7BPQ9NSQ0 103 aa31.75■■■□□ 2.67
TMEM259-201ENST00000333175 GRIN2AQ12879 1464 aa31.73■■■□□ 2.67
TMEM259-201ENST00000333175 KIAA0586Q9BVV6 1533 aa31.73■■■□□ 2.67
TMEM259-201ENST00000333175 DISP1Q96F81 1524 aa31.72■■■□□ 2.67
TMEM259-201ENST00000333175 UACAQ9BZF9 1416 aa31.71■■■□□ 2.67
TMEM259-201ENST00000333175 KIAA0556O60303 1618 aa31.71■■■□□ 2.67
TMEM259-201ENST00000333175 HIRIP3Q9BW71 556 aaPredicted RBP31.69■■■□□ 2.66
TMEM259-201ENST00000333175 FBLN2P98095 1184 aa31.67■■■□□ 2.66
TMEM259-201ENST00000333175 PPP1R15AO75807 674 aaPredicted RBP31.65■■■□□ 2.66
TMEM259-201ENST00000333175 TCOF1Q13428 1488 aaKnown RBP31.65■■■□□ 2.66
TMEM259-201ENST00000333175 CHMP7Q8WUX9 453 aaPredicted RBP31.63■■■□□ 2.65
TMEM259-201ENST00000333175 TIMELESSQ9UNS1 1208 aa31.63■■■□□ 2.65
TMEM259-201ENST00000333175 TONSLQ96HA7 1378 aa31.62■■■□□ 2.65
TMEM259-201ENST00000333175 NUP153P49790 1475 aaKnown RBP31.6■■■□□ 2.65
TMEM259-201ENST00000333175 DDX10Q13206 875 aaKnown RBP31.59■■■□□ 2.65
TMEM259-201ENST00000333175 PELP1Q8IZL8 1130 aaKnown RBP31.56■■■□□ 2.64
TMEM259-201ENST00000333175 KDM6BO15054 1643 aa31.56■■■□□ 2.64
TMEM259-201ENST00000333175 CEP170Q5SW79 1584 aa31.56■■■□□ 2.64
TMEM259-201ENST00000333175 TRIM52Q96A61 297 aa31.55■■■□□ 2.64
TMEM259-201ENST00000333175 RAPGEF6Q8TEU7 1601 aa31.55■■■□□ 2.64
TMEM259-201ENST00000333175 MAGI1Q96QZ7 1491 aaPredicted RBP31.54■■■□□ 2.64
TMEM259-201ENST00000333175 MIA2Q96PC5 1412 aa31.53■■■□□ 2.64
TMEM259-201ENST00000333175 KCNH8Q96L42 1107 aa31.53■■■□□ 2.64
TMEM259-201ENST00000333175 GCC2Q8IWJ2 1684 aa31.51■■■□□ 2.64
TMEM259-201ENST00000333175 SYNJ2O15056 1496 aa31.51■■■□□ 2.63
TMEM259-201ENST00000333175 ZNF644Q9H582 1327 aaPredicted RBP31.51■■■□□ 2.63
TMEM259-201ENST00000333175 PLB1Q6P1J6 1458 aa31.47■■■□□ 2.63
TMEM259-201ENST00000333175 DENND4BO75064 1496 aaPredicted RBP31.44■■■□□ 2.62
TMEM259-201ENST00000333175 PRG4Q92954 1404 aaPredicted RBP31.43■■■□□ 2.62
TMEM259-201ENST00000333175 CDK11AQ9UQ88 783 aaPredicted RBP31.41■■■□□ 2.62
TMEM259-201ENST00000333175 AKNAQ7Z591 1439 aa31.4■■■□□ 2.62
TMEM259-201ENST00000333175 DAPK1P53355 1430 aa31.4■■■□□ 2.62
TMEM259-201ENST00000333175 FOXD1Q16676 465 aa31.4■■■□□ 2.62
TMEM259-201ENST00000333175 JPH4Q96JJ6 628 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms