RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 RBM19Q9Y4C8 960 aaKnown RBP18.81■□□□□ 0.6
PRKCH-201ENST00000332981 KIF21BO75037 1637 aa18.78■□□□□ 0.6
PRKCH-201ENST00000332981 NBR1Q14596 966 aa18.77■□□□□ 0.6
PRKCH-201ENST00000332981 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.59
PRKCH-201ENST00000332981 ARAP1Q96P48 1450 aa18.73■□□□□ 0.59
PRKCH-201ENST00000332981 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
PRKCH-201ENST00000332981 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
PRKCH-201ENST00000332981 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
PRKCH-201ENST00000332981 CUX2O14529 1486 aa18.68■□□□□ 0.58
PRKCH-201ENST00000332981 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
PRKCH-201ENST00000332981 MRS2Q9HD23 443 aa18.66■□□□□ 0.58
PRKCH-201ENST00000332981 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
PRKCH-201ENST00000332981 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
PRKCH-201ENST00000332981 NPM2Q86SE8 214 aaKnown RBP18.65■□□□□ 0.58
PRKCH-201ENST00000332981 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
PRKCH-201ENST00000332981 MTUS2Q5JR59 1369 aa18.63■□□□□ 0.57
PRKCH-201ENST00000332981 RTN4Q9NQC3 1192 aaKnown RBP18.63■□□□□ 0.57
PRKCH-201ENST00000332981 PPP1R15AO75807 674 aaPredicted RBP18.62■□□□□ 0.57
PRKCH-201ENST00000332981 CARMIL1Q5VZK9 1371 aa18.61■□□□□ 0.57
PRKCH-201ENST00000332981 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
PRKCH-201ENST00000332981 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
PRKCH-201ENST00000332981 FBLN2P98095 1184 aa18.56■□□□□ 0.56
PRKCH-201ENST00000332981 CCDC184Q52MB2 194 aa18.56■□□□□ 0.56
PRKCH-201ENST00000332981 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
PRKCH-201ENST00000332981 KDM2AQ9Y2K7 1162 aa18.53■□□□□ 0.56
PRKCH-201ENST00000332981 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
PRKCH-201ENST00000332981 ARHGAP35Q9NRY4 1499 aa18.49■□□□□ 0.55
PRKCH-201ENST00000332981 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
PRKCH-201ENST00000332981 IGF1RP08069 1367 aa18.45■□□□□ 0.54
PRKCH-201ENST00000332981 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
PRKCH-201ENST00000332981 MSH5O43196 834 aa18.43■□□□□ 0.54
PRKCH-201ENST00000332981 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
PRKCH-201ENST00000332981 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
PRKCH-201ENST00000332981 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
PRKCH-201ENST00000332981 EIF5BO60841 1220 aaKnown RBP18.42■□□□□ 0.54
PRKCH-201ENST00000332981 L3MBTL2Q969R5 705 aa18.4■□□□□ 0.54
PRKCH-201ENST00000332981 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
PRKCH-201ENST00000332981 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
PRKCH-201ENST00000332981 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
PRKCH-201ENST00000332981 CUX1P39880 1505 aa18.35■□□□□ 0.53
PRKCH-201ENST00000332981 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.35■□□□□ 0.53
PRKCH-201ENST00000332981 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
PRKCH-201ENST00000332981 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
PRKCH-201ENST00000332981 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.53
PRKCH-201ENST00000332981 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
PRKCH-201ENST00000332981 WASHC2AQ641Q2 1341 aa18.33■□□□□ 0.52
PRKCH-201ENST00000332981 DEKP35659 375 aaKnown RBP18.32■□□□□ 0.52
PRKCH-201ENST00000332981 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
PRKCH-201ENST00000332981 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
PRKCH-201ENST00000332981 PPP4R2Q9NY27 417 aa18.3■□□□□ 0.52
PRKCH-201ENST00000332981 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
PRKCH-201ENST00000332981 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
PRKCH-201ENST00000332981 LRRC9Q6ZRR7 1453 aa18.29■□□□□ 0.52
PRKCH-201ENST00000332981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
PRKCH-201ENST00000332981 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
PRKCH-201ENST00000332981 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.51
PRKCH-201ENST00000332981 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
PRKCH-201ENST00000332981 FHAD1B1AJZ9 1412 aa18.26■□□□□ 0.51
PRKCH-201ENST00000332981 ANP32AP39687 249 aaKnown RBP18.26■□□□□ 0.51
PRKCH-201ENST00000332981 TOP2BQ02880 1626 aa18.26■□□□□ 0.51
PRKCH-201ENST00000332981 FGD5Q6ZNL6 1462 aa18.23■□□□□ 0.51
PRKCH-201ENST00000332981 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
PRKCH-201ENST00000332981 CCDC18Q5T9S5 1454 aa18.22■□□□□ 0.51
PRKCH-201ENST00000332981 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-201ENST00000332981 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
PRKCH-201ENST00000332981 ANO8Q9HCE9 1232 aaPredicted RBP18.21■□□□□ 0.51
PRKCH-201ENST00000332981 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-201ENST00000332981 ZBTB47Q9UFB7 747 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-201ENST00000332981 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
PRKCH-201ENST00000332981 SKAP1Q86WV1 359 aa18.17■□□□□ 0.5
PRKCH-201ENST00000332981 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
PRKCH-201ENST00000332981 TIMELESSQ9UNS1 1208 aa18.16■□□□□ 0.5
PRKCH-201ENST00000332981 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
PRKCH-201ENST00000332981 PRKCSHP14314 528 aaPredicted RBP18.16■□□□□ 0.5
PRKCH-201ENST00000332981 CC2D1BQ5T0F9 858 aaKnown RBP18.15■□□□□ 0.5
PRKCH-201ENST00000332981 ARXQ96QS3 562 aa18.15■□□□□ 0.5
PRKCH-201ENST00000332981 CARD11Q9BXL7 1154 aa18.15■□□□□ 0.5
PRKCH-201ENST00000332981 DAXXQ9UER7 740 aaPredicted RBP18.14■□□□□ 0.49
PRKCH-201ENST00000332981 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
PRKCH-201ENST00000332981 FGD6Q6ZV73 1430 aa18.13■□□□□ 0.49
PRKCH-201ENST00000332981 PLIN1O60240 522 aa18.12■□□□□ 0.49
PRKCH-201ENST00000332981 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
PRKCH-201ENST00000332981 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
PRKCH-201ENST00000332981 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
PRKCH-201ENST00000332981 PKD2Q13563 968 aa18.11■□□□□ 0.49
PRKCH-201ENST00000332981 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
PRKCH-201ENST00000332981 AKNAQ7Z591 1439 aa18.1■□□□□ 0.49
PRKCH-201ENST00000332981 NESP48681 1621 aa18.1■□□□□ 0.49
PRKCH-201ENST00000332981 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRKCH-201ENST00000332981 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
PRKCH-201ENST00000332981 CFTRP13569 1480 aa18.07■□□□□ 0.48
PRKCH-201ENST00000332981 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
PRKCH-201ENST00000332981 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
PRKCH-201ENST00000332981 PCF11O94913 1555 aaKnown RBP18.03■□□□□ 0.48
PRKCH-201ENST00000332981 EXOC6Q8TAG9 804 aa18.03■□□□□ 0.48
PRKCH-201ENST00000332981 FANCD2Q9BXW9 1451 aa18.03■□□□□ 0.48
PRKCH-201ENST00000332981 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
PRKCH-201ENST00000332981 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
PRKCH-201ENST00000332981 CCDC7Q96M83 1385 aa18■□□□□ 0.47
PRKCH-201ENST00000332981 NEFMP07197 916 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms