RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
PRKCH-201ENST00000332981 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
PRKCH-201ENST00000332981 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
PRKCH-201ENST00000332981 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
PRKCH-201ENST00000332981 PCGF6Q9BYE7 350 aa22.56■■□□□ 1.2
PRKCH-201ENST00000332981 EHMT2Q96KQ7 1210 aa22.54■■□□□ 1.2
PRKCH-201ENST00000332981 PPARGC1BQ86YN6 1023 aaKnown RBP22.3■■□□□ 1.16
PRKCH-201ENST00000332981 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
PRKCH-201ENST00000332981 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
PRKCH-201ENST00000332981 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
PRKCH-201ENST00000332981 HRCP23327 699 aa22■■□□□ 1.11
PRKCH-201ENST00000332981 TTBK1Q5TCY1 1321 aaPredicted RBP21.75■■□□□ 1.07
PRKCH-201ENST00000332981 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
PRKCH-201ENST00000332981 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
PRKCH-201ENST00000332981 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
PRKCH-201ENST00000332981 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
PRKCH-201ENST00000332981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
PRKCH-201ENST00000332981 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
PRKCH-201ENST00000332981 RANGAP1P46060 587 aaPredicted RBP21.04■□□□□ 0.96
PRKCH-201ENST00000332981 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
PRKCH-201ENST00000332981 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
PRKCH-201ENST00000332981 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.92
PRKCH-201ENST00000332981 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
PRKCH-201ENST00000332981 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
PRKCH-201ENST00000332981 UBTFP17480 764 aaKnown RBP20.67■□□□□ 0.9
PRKCH-201ENST00000332981 HNRNPUL2Q1KMD3 747 aaKnown RBP20.57■□□□□ 0.88
PRKCH-201ENST00000332981 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
PRKCH-201ENST00000332981 DIEXFQ68CQ4 756 aaKnown RBP20.52■□□□□ 0.88
PRKCH-201ENST00000332981 NEUROD1Q13562 356 aa20.51■□□□□ 0.87
PRKCH-201ENST00000332981 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
PRKCH-201ENST00000332981 ABCC9O60706 1549 aa20.45■□□□□ 0.86
PRKCH-201ENST00000332981 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
PRKCH-201ENST00000332981 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
PRKCH-201ENST00000332981 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
PRKCH-201ENST00000332981 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
PRKCH-201ENST00000332981 APLP2Q06481 763 aa20.3■□□□□ 0.84
PRKCH-201ENST00000332981 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
PRKCH-201ENST00000332981 ITGAEP38570 1179 aa20.25■□□□□ 0.83
PRKCH-201ENST00000332981 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
PRKCH-201ENST00000332981 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
PRKCH-201ENST00000332981 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
PRKCH-201ENST00000332981 MIER1Q8N108 512 aa20.03■□□□□ 0.8
PRKCH-201ENST00000332981 ZNF316A6NFI3 1004 aaPredicted RBP20.02■□□□□ 0.8
PRKCH-201ENST00000332981 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
PRKCH-201ENST00000332981 BCANQ96GW7 911 aa19.92■□□□□ 0.78
PRKCH-201ENST00000332981 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
PRKCH-201ENST00000332981 MYT1Q01538 1121 aa19.85■□□□□ 0.77
PRKCH-201ENST00000332981 SOGA1O94964 1423 aa19.84■□□□□ 0.77
PRKCH-201ENST00000332981 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
PRKCH-201ENST00000332981 CEP162Q5TB80 1403 aa19.79■□□□□ 0.76
PRKCH-201ENST00000332981 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
PRKCH-201ENST00000332981 WIZO95785 1651 aa19.72■□□□□ 0.75
PRKCH-201ENST00000332981 HIRIP3Q9BW71 556 aaPredicted RBP19.7■□□□□ 0.74
PRKCH-201ENST00000332981 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
PRKCH-201ENST00000332981 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
PRKCH-201ENST00000332981 P3H3Q8IVL6 736 aa19.62■□□□□ 0.73
PRKCH-201ENST00000332981 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
PRKCH-201ENST00000332981 KCNH8Q96L42 1107 aa19.49■□□□□ 0.71
PRKCH-201ENST00000332981 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
PRKCH-201ENST00000332981 CLIP1P30622 1438 aa19.46■□□□□ 0.71
PRKCH-201ENST00000332981 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
PRKCH-201ENST00000332981 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
PRKCH-201ENST00000332981 KANK4Q5T7N3 995 aaPredicted RBP19.41■□□□□ 0.7
PRKCH-201ENST00000332981 FKBP8Q14318 412 aa19.37■□□□□ 0.69
PRKCH-201ENST00000332981 NEFLP07196 543 aa19.34■□□□□ 0.69
PRKCH-201ENST00000332981 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
PRKCH-201ENST00000332981 WRNQ14191 1432 aaPredicted RBP eCLIP19.33■□□□□ 0.69
PRKCH-201ENST00000332981 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.68
PRKCH-201ENST00000332981 IRX6P78412 446 aaPredicted RBP19.33■□□□□ 0.68
PRKCH-201ENST00000332981 ERICH6Q7L0X2 663 aa19.33■□□□□ 0.68
PRKCH-201ENST00000332981 SIN3AQ96ST3 1273 aa19.32■□□□□ 0.68
PRKCH-201ENST00000332981 SUPT16HQ9Y5B9 1047 aaKnown RBP19.32■□□□□ 0.68
PRKCH-201ENST00000332981 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
PRKCH-201ENST00000332981 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
PRKCH-201ENST00000332981 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
PRKCH-201ENST00000332981 NACADO15069 1562 aa19.19■□□□□ 0.66
PRKCH-201ENST00000332981 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
PRKCH-201ENST00000332981 BCL11AQ9H165 835 aa19.15■□□□□ 0.66
PRKCH-201ENST00000332981 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
PRKCH-201ENST00000332981 ANP32CO43423 234 aa19.07■□□□□ 0.64
PRKCH-201ENST00000332981 TSHZ2Q9NRE2 1034 aa19.07■□□□□ 0.64
PRKCH-201ENST00000332981 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
PRKCH-201ENST00000332981 CHIC2Q9UKJ5 165 aa19.06■□□□□ 0.64
PRKCH-201ENST00000332981 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
PRKCH-201ENST00000332981 EEA1Q15075 1411 aa19.03■□□□□ 0.64
PRKCH-201ENST00000332981 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
PRKCH-201ENST00000332981 DHX57Q6P158 1386 aaKnown RBP19.02■□□□□ 0.64
PRKCH-201ENST00000332981 HNRNPUQ00839 825 aaKnown RBP eCLIP19.02■□□□□ 0.64
PRKCH-201ENST00000332981 ZNF326Q5BKZ1 582 aaKnown RBP18.99■□□□□ 0.63
PRKCH-201ENST00000332981 ANP32EQ9BTT0 268 aa18.97■□□□□ 0.63
PRKCH-201ENST00000332981 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
PRKCH-201ENST00000332981 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
PRKCH-201ENST00000332981 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
PRKCH-201ENST00000332981 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
PRKCH-201ENST00000332981 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
PRKCH-201ENST00000332981 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.62
PRKCH-201ENST00000332981 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
PRKCH-201ENST00000332981 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
PRKCH-201ENST00000332981 SALL2Q9Y467 1007 aaPredicted RBP18.83■□□□□ 0.6
PRKCH-201ENST00000332981 FOXD1Q16676 465 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms