RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 CCNB3Q8WWL7 1395 aa28.03■■■□□ 2.08
LAMP1-201ENST00000332556 FHOD3Q2V2M9 1422 aa28.03■■■□□ 2.08
LAMP1-201ENST00000332556 FAM50AQ14320 339 aaKnown RBP28.01■■■□□ 2.07
LAMP1-201ENST00000332556 RRBP1Q9P2E9 1410 aaKnown RBP27.98■■■□□ 2.07
LAMP1-201ENST00000332556 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
LAMP1-201ENST00000332556 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
LAMP1-201ENST00000332556 PHLDB1Q86UU1 1377 aa27.93■■■□□ 2.06
LAMP1-201ENST00000332556 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
LAMP1-201ENST00000332556 TIAM1Q13009 1591 aa27.9■■■□□ 2.06
LAMP1-201ENST00000332556 PCF11O94913 1555 aaKnown RBP27.87■■■□□ 2.05
LAMP1-201ENST00000332556 LRRC9Q6ZRR7 1453 aa27.85■■■□□ 2.05
LAMP1-201ENST00000332556 RAB3GAP2Q9H2M9 1393 aa27.84■■■□□ 2.05
LAMP1-201ENST00000332556 ARID3CA6NKF2 412 aa27.76■■■□□ 2.03
LAMP1-201ENST00000332556 FHAD1B1AJZ9 1412 aa27.74■■■□□ 2.03
LAMP1-201ENST00000332556 SIN3AQ96ST3 1273 aa27.74■■■□□ 2.03
LAMP1-201ENST00000332556 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
LAMP1-201ENST00000332556 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
LAMP1-201ENST00000332556 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
LAMP1-201ENST00000332556 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
LAMP1-201ENST00000332556 CLSPNQ9HAW4 1339 aa27.64■■■□□ 2.02
LAMP1-201ENST00000332556 SETD5Q9C0A6 1442 aa27.62■■■□□ 2.01
LAMP1-201ENST00000332556 CUL7Q14999 1698 aa27.61■■■□□ 2.01
LAMP1-201ENST00000332556 CTTNBP2Q8WZ74 1663 aa27.61■■■□□ 2.01
LAMP1-201ENST00000332556 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.01
LAMP1-201ENST00000332556 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
LAMP1-201ENST00000332556 MAP3K1Q13233 1512 aa27.59■■■□□ 2.01
LAMP1-201ENST00000332556 MAPKBP1O60336 1514 aa27.59■■■□□ 2.01
LAMP1-201ENST00000332556 CFAP43Q8NDM7 1665 aa27.58■■■□□ 2.01
LAMP1-201ENST00000332556 CASKIN1Q8WXD9 1431 aa27.58■■■□□ 2.01
LAMP1-201ENST00000332556 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
LAMP1-201ENST00000332556 MYT1Q01538 1121 aa27.57■■■□□ 2
LAMP1-201ENST00000332556 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
LAMP1-201ENST00000332556 ABCA5Q8WWZ7 1642 aa27.55■■■□□ 2
LAMP1-201ENST00000332556 FYCO1Q9BQS8 1478 aa27.55■■■□□ 2
LAMP1-201ENST00000332556 EFCAB5A4FU69 1503 aa27.51■■□□□ 1.99
LAMP1-201ENST00000332556 SNAPC4Q5SXM2 1469 aa27.5■■□□□ 1.99
LAMP1-201ENST00000332556 FMN1Q68DA7 1419 aa27.49■■□□□ 1.99
LAMP1-201ENST00000332556 LRRIQ1Q96JM4 1722 aa27.45■■□□□ 1.99
LAMP1-201ENST00000332556 CHIC2Q9UKJ5 165 aa27.45■■□□□ 1.98
LAMP1-201ENST00000332556 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
LAMP1-201ENST00000332556 PTPRKQ15262 1439 aa27.43■■□□□ 1.98
LAMP1-201ENST00000332556 KCNH8Q96L42 1107 aa27.42■■□□□ 1.98
LAMP1-201ENST00000332556 FGD6Q6ZV73 1430 aa27.42■■□□□ 1.98
LAMP1-201ENST00000332556 ZNF608Q9ULD9 1512 aaPredicted RBP27.38■■□□□ 1.97
LAMP1-201ENST00000332556 RRP7BPQ9NSQ0 103 aa27.37■■□□□ 1.97
LAMP1-201ENST00000332556 SAMD9Q5K651 1589 aa27.36■■□□□ 1.97
LAMP1-201ENST00000332556 NCOA2Q15596 1464 aa27.34■■□□□ 1.97
LAMP1-201ENST00000332556 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
LAMP1-201ENST00000332556 DDX10Q13206 875 aaKnown RBP27.33■■□□□ 1.96
LAMP1-201ENST00000332556 MAGI3Q5TCQ9 1506 aa27.32■■□□□ 1.96
LAMP1-201ENST00000332556 SUPT16HQ9Y5B9 1047 aaKnown RBP27.32■■□□□ 1.96
LAMP1-201ENST00000332556 PBRM1Q86U86 1689 aa27.28■■□□□ 1.96
LAMP1-201ENST00000332556 CDK13Q14004 1512 aaKnown RBP27.27■■□□□ 1.96
LAMP1-201ENST00000332556 FBLN2P98095 1184 aa27.26■■□□□ 1.96
LAMP1-201ENST00000332556 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
LAMP1-201ENST00000332556 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
LAMP1-201ENST00000332556 CCDC18Q5T9S5 1454 aa27.24■■□□□ 1.95
LAMP1-201ENST00000332556 IQGAP2Q13576 1575 aa27.18■■□□□ 1.94
LAMP1-201ENST00000332556 TRIM52Q96A61 297 aa27.18■■□□□ 1.94
LAMP1-201ENST00000332556 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
LAMP1-201ENST00000332556 PPP1R15AO75807 674 aaPredicted RBP27.17■■□□□ 1.94
LAMP1-201ENST00000332556 FOXD1Q16676 465 aa27.16■■□□□ 1.94
LAMP1-201ENST00000332556 NAIPQ13075 1403 aa27.15■■□□□ 1.94
LAMP1-201ENST00000332556 SUPT6HQ7KZ85 1726 aaKnown RBP27.14■■□□□ 1.94
LAMP1-201ENST00000332556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.13■■□□□ 1.93
LAMP1-201ENST00000332556 EPRSP07814 1512 aaKnown RBP27.12■■□□□ 1.93
LAMP1-201ENST00000332556 PTPN23Q9H3S7 1636 aa27.12■■□□□ 1.93
LAMP1-201ENST00000332556 ZNF644Q9H582 1327 aaPredicted RBP27.12■■□□□ 1.93
LAMP1-201ENST00000332556 TONSLQ96HA7 1378 aa27.11■■□□□ 1.93
LAMP1-201ENST00000332556 HFM1A2PYH4 1435 aa27.11■■□□□ 1.93
LAMP1-201ENST00000332556 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
LAMP1-201ENST00000332556 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
LAMP1-201ENST00000332556 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
LAMP1-201ENST00000332556 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
LAMP1-201ENST00000332556 CHMP7Q8WUX9 453 aaPredicted RBP27.04■■□□□ 1.92
LAMP1-201ENST00000332556 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
LAMP1-201ENST00000332556 KDM6BO15054 1643 aa27.03■■□□□ 1.92
LAMP1-201ENST00000332556 HECW1Q76N89 1606 aa27.03■■□□□ 1.92
LAMP1-201ENST00000332556 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
LAMP1-201ENST00000332556 TSHZ2Q9NRE2 1034 aa27.01■■□□□ 1.91
LAMP1-201ENST00000332556 WDR62O43379 1518 aa26.99■■□□□ 1.91
LAMP1-201ENST00000332556 BCANQ96GW7 911 aa26.98■■□□□ 1.91
LAMP1-201ENST00000332556 DISP1Q96F81 1524 aa26.97■■□□□ 1.91
LAMP1-201ENST00000332556 ZNF777Q9ULD5 760 aaPredicted RBP26.97■■□□□ 1.91
LAMP1-201ENST00000332556 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
LAMP1-201ENST00000332556 ARHGEF11O15085 1522 aa26.97■■□□□ 1.91
LAMP1-201ENST00000332556 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
LAMP1-201ENST00000332556 KIAA0586Q9BVV6 1533 aa26.91■■□□□ 1.9
LAMP1-201ENST00000332556 DENND4BO75064 1496 aaPredicted RBP26.9■■□□□ 1.9
LAMP1-201ENST00000332556 TIMELESSQ9UNS1 1208 aa26.9■■□□□ 1.9
LAMP1-201ENST00000332556 NUP153P49790 1475 aaKnown RBP26.9■■□□□ 1.9
LAMP1-201ENST00000332556 MPHOSPH9Q99550 1183 aa26.9■■□□□ 1.9
LAMP1-201ENST00000332556 PRG4Q92954 1404 aaPredicted RBP26.89■■□□□ 1.9
LAMP1-201ENST00000332556 KIAA0556O60303 1618 aa26.89■■□□□ 1.9
LAMP1-201ENST00000332556 PLB1Q6P1J6 1458 aa26.89■■□□□ 1.89
LAMP1-201ENST00000332556 TCOF1Q13428 1488 aaKnown RBP26.85■■□□□ 1.89
LAMP1-201ENST00000332556 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
LAMP1-201ENST00000332556 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
LAMP1-201ENST00000332556 L3MBTL2Q969R5 705 aa26.8■■□□□ 1.88
LAMP1-201ENST00000332556 ANP32CO43423 234 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms