RNA–Protein interactions for RNA: ENST00000329608.10

CSF1-201, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-201ENST00000329608 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
CSF1-201ENST00000329608 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
CSF1-201ENST00000329608 ACIN1Q9UKV3 1341 aaKnown RBP21.27■□□□□ 0.99
CSF1-201ENST00000329608 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
CSF1-201ENST00000329608 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
CSF1-201ENST00000329608 ABCA10Q8WWZ4 1543 aa21.21■□□□□ 0.99
CSF1-201ENST00000329608 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
CSF1-201ENST00000329608 RRBP1Q9P2E9 1410 aaKnown RBP21.21■□□□□ 0.99
CSF1-201ENST00000329608 PHLDB1Q86UU1 1377 aa21.2■□□□□ 0.98
CSF1-201ENST00000329608 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
CSF1-201ENST00000329608 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
CSF1-201ENST00000329608 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
CSF1-201ENST00000329608 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
CSF1-201ENST00000329608 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
CSF1-201ENST00000329608 SIN3AQ96ST3 1273 aa21.13■□□□□ 0.97
CSF1-201ENST00000329608 TIAM1Q13009 1591 aa21.12■□□□□ 0.97
CSF1-201ENST00000329608 FBLN2P98095 1184 aa21.12■□□□□ 0.97
CSF1-201ENST00000329608 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
CSF1-201ENST00000329608 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
CSF1-201ENST00000329608 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.964e-6■■■■■ 28.3
CSF1-201ENST00000329608 PCF11O94913 1555 aaKnown RBP21.07■□□□□ 0.96
CSF1-201ENST00000329608 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
CSF1-201ENST00000329608 CHIC2Q9UKJ5 165 aa21.06■□□□□ 0.96
CSF1-201ENST00000329608 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
CSF1-201ENST00000329608 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
CSF1-201ENST00000329608 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
CSF1-201ENST00000329608 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
CSF1-201ENST00000329608 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
CSF1-201ENST00000329608 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.95
CSF1-201ENST00000329608 CUL7Q14999 1698 aa20.95■□□□□ 0.94
CSF1-201ENST00000329608 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
CSF1-201ENST00000329608 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
CSF1-201ENST00000329608 MAP3K1Q13233 1512 aa20.92■□□□□ 0.94
CSF1-201ENST00000329608 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.94
CSF1-201ENST00000329608 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
CSF1-201ENST00000329608 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
CSF1-201ENST00000329608 FGD6Q6ZV73 1430 aa20.87■□□□□ 0.93
CSF1-201ENST00000329608 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
CSF1-201ENST00000329608 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.93
CSF1-201ENST00000329608 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.93
CSF1-201ENST00000329608 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
CSF1-201ENST00000329608 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
CSF1-201ENST00000329608 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
CSF1-201ENST00000329608 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
CSF1-201ENST00000329608 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
CSF1-201ENST00000329608 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
CSF1-201ENST00000329608 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
CSF1-201ENST00000329608 MAPKBP1O60336 1514 aa20.77■□□□□ 0.92
CSF1-201ENST00000329608 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
CSF1-201ENST00000329608 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
CSF1-201ENST00000329608 PTPRKQ15262 1439 aa20.73■□□□□ 0.91
CSF1-201ENST00000329608 TARBP1Q13395 1621 aaKnown RBP20.73■□□□□ 0.91
CSF1-201ENST00000329608 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
CSF1-201ENST00000329608 FOXD1Q16676 465 aa20.72■□□□□ 0.91
CSF1-201ENST00000329608 KCNH8Q96L42 1107 aa20.72■□□□□ 0.91
CSF1-201ENST00000329608 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
CSF1-201ENST00000329608 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
CSF1-201ENST00000329608 CDK13Q14004 1512 aaKnown RBP20.7■□□□□ 0.9
CSF1-201ENST00000329608 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
CSF1-201ENST00000329608 ZNF644Q9H582 1327 aaPredicted RBP20.68■□□□□ 0.9
CSF1-201ENST00000329608 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
CSF1-201ENST00000329608 SAMD9Q5K651 1589 aa20.66■□□□□ 0.9
CSF1-201ENST00000329608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.64■□□□□ 0.891e-6■■■■■ 32.9
CSF1-201ENST00000329608 EPRSP07814 1512 aaKnown RBP20.63■□□□□ 0.89
CSF1-201ENST00000329608 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
CSF1-201ENST00000329608 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
CSF1-201ENST00000329608 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
CSF1-201ENST00000329608 NAIPQ13075 1403 aa20.61■□□□□ 0.89
CSF1-201ENST00000329608 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
CSF1-201ENST00000329608 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 SUPT6HQ7KZ85 1726 aaKnown RBP20.59■□□□□ 0.89
CSF1-201ENST00000329608 ANP32CO43423 234 aa20.59■□□□□ 0.89
CSF1-201ENST00000329608 UACAQ9BZF9 1416 aa20.59■□□□□ 0.89
CSF1-201ENST00000329608 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
CSF1-201ENST00000329608 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
CSF1-201ENST00000329608 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
CSF1-201ENST00000329608 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
CSF1-201ENST00000329608 HECW1Q76N89 1606 aa20.55■□□□□ 0.88
CSF1-201ENST00000329608 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
CSF1-201ENST00000329608 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
CSF1-201ENST00000329608 GRIN2AQ12879 1464 aa20.54■□□□□ 0.88
CSF1-201ENST00000329608 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
CSF1-201ENST00000329608 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
CSF1-201ENST00000329608 PLEKHD1A6NEE1 506 aa20.52■□□□□ 0.88
CSF1-201ENST00000329608 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.88
CSF1-201ENST00000329608 LRRIQ1Q96JM4 1722 aa20.51■□□□□ 0.87
CSF1-201ENST00000329608 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
CSF1-201ENST00000329608 WDR62O43379 1518 aa20.48■□□□□ 0.87
CSF1-201ENST00000329608 PLB1Q6P1J6 1458 aa20.48■□□□□ 0.87
CSF1-201ENST00000329608 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
CSF1-201ENST00000329608 L3MBTL2Q969R5 705 aa20.47■□□□□ 0.87
CSF1-201ENST00000329608 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
CSF1-201ENST00000329608 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
CSF1-201ENST00000329608 BCANQ96GW7 911 aa20.46■□□□□ 0.87
CSF1-201ENST00000329608 DISP1Q96F81 1524 aa20.45■□□□□ 0.86
CSF1-201ENST00000329608 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
CSF1-201ENST00000329608 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms