RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
SCAP-202ENST00000320017 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.12■□□□□ 0.97
SCAP-202ENST00000320017 MYT1LQ9UL68 1186 aa21.12■□□□□ 0.97
SCAP-202ENST00000320017 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
SCAP-202ENST00000320017 CUX2O14529 1486 aa21.09■□□□□ 0.97
SCAP-202ENST00000320017 KIF27Q86VH2 1401 aa21.08■□□□□ 0.96
SCAP-202ENST00000320017 CUX1P39880 1505 aa21.08■□□□□ 0.96
SCAP-202ENST00000320017 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
SCAP-202ENST00000320017 FANCIQ9NVI1 1328 aa21.05■□□□□ 0.96
SCAP-202ENST00000320017 FANCD2Q9BXW9 1451 aa21.02■□□□□ 0.96
SCAP-202ENST00000320017 DDX10Q13206 875 aaKnown RBP21.01■□□□□ 0.95
SCAP-202ENST00000320017 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
SCAP-202ENST00000320017 VPS8Q8N3P4 1428 aa20.98■□□□□ 0.95
SCAP-202ENST00000320017 RTL5Q5HYW3 569 aaPredicted RBP20.96■□□□□ 0.95
SCAP-202ENST00000320017 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.95
SCAP-202ENST00000320017 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
SCAP-202ENST00000320017 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
SCAP-202ENST00000320017 FAM50AQ14320 339 aaKnown RBP20.93■□□□□ 0.94
SCAP-202ENST00000320017 IL27Q8NEV9 243 aa20.92■□□□□ 0.94
SCAP-202ENST00000320017 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
SCAP-202ENST00000320017 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
SCAP-202ENST00000320017 EIF5BO60841 1220 aaKnown RBP20.89■□□□□ 0.93
SCAP-202ENST00000320017 IGF1RP08069 1367 aa20.87■□□□□ 0.93
SCAP-202ENST00000320017 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
SCAP-202ENST00000320017 NOP58Q9Y2X3 529 aaKnown RBP20.85■□□□□ 0.93
SCAP-202ENST00000320017 ERICH6BQ5W0A0 696 aa20.84■□□□□ 0.93
SCAP-202ENST00000320017 DHX57Q6P158 1386 aaKnown RBP20.84■□□□□ 0.93
SCAP-202ENST00000320017 FBLN2P98095 1184 aa20.83■□□□□ 0.92
SCAP-202ENST00000320017 KIF21BO75037 1637 aa20.8■□□□□ 0.92
SCAP-202ENST00000320017 PAK3O75914 559 aaPredicted RBP20.78■□□□□ 0.92
SCAP-202ENST00000320017 ANP32CO43423 234 aa20.78■□□□□ 0.92
SCAP-202ENST00000320017 PRXQ9BXM0 1461 aa20.77■□□□□ 0.92
SCAP-202ENST00000320017 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
SCAP-202ENST00000320017 UBE2Q2Q8WVN8 375 aa20.75■□□□□ 0.91
SCAP-202ENST00000320017 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
SCAP-202ENST00000320017 HNRNPUQ00839 825 aaKnown RBP eCLIP20.74■□□□□ 0.91
SCAP-202ENST00000320017 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
SCAP-202ENST00000320017 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
SCAP-202ENST00000320017 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
SCAP-202ENST00000320017 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
SCAP-202ENST00000320017 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
SCAP-202ENST00000320017 CCNB3Q8WWL7 1395 aa20.64■□□□□ 0.89
SCAP-202ENST00000320017 ANP32AP39687 249 aaKnown RBP20.63■□□□□ 0.89
SCAP-202ENST00000320017 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
SCAP-202ENST00000320017 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
SCAP-202ENST00000320017 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
SCAP-202ENST00000320017 ZBTB47Q9UFB7 747 aaPredicted RBP20.6■□□□□ 0.89
SCAP-202ENST00000320017 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
SCAP-202ENST00000320017 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
SCAP-202ENST00000320017 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.892e-9■■■■□ 25.7
SCAP-202ENST00000320017 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
SCAP-202ENST00000320017 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
SCAP-202ENST00000320017 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
SCAP-202ENST00000320017 NPM2Q86SE8 214 aaKnown RBP20.54■□□□□ 0.88
SCAP-202ENST00000320017 CCER2I3L3R5 266 aa20.53■□□□□ 0.88
SCAP-202ENST00000320017 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
SCAP-202ENST00000320017 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
SCAP-202ENST00000320017 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
SCAP-202ENST00000320017 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
SCAP-202ENST00000320017 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
SCAP-202ENST00000320017 NEFMP07197 916 aa20.46■□□□□ 0.87
SCAP-202ENST00000320017 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
SCAP-202ENST00000320017 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
SCAP-202ENST00000320017 PKNOX2Q96KN3 472 aa20.45■□□□□ 0.86
SCAP-202ENST00000320017 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
SCAP-202ENST00000320017 CHIC2Q9UKJ5 165 aa20.44■□□□□ 0.86
SCAP-202ENST00000320017 TIMELESSQ9UNS1 1208 aa20.43■□□□□ 0.86
SCAP-202ENST00000320017 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
SCAP-202ENST00000320017 PHLDB1Q86UU1 1377 aa20.41■□□□□ 0.86
SCAP-202ENST00000320017 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
SCAP-202ENST00000320017 MTUS2Q5JR59 1369 aa20.38■□□□□ 0.85
SCAP-202ENST00000320017 RRBP1Q9P2E9 1410 aaKnown RBP20.37■□□□□ 0.85
SCAP-202ENST00000320017 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
SCAP-202ENST00000320017 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
SCAP-202ENST00000320017 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
SCAP-202ENST00000320017 FAM9BQ8IZU0 186 aa20.34■□□□□ 0.85
SCAP-202ENST00000320017 RRP7BPQ9NSQ0 103 aa20.33■□□□□ 0.85
SCAP-202ENST00000320017 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.84
SCAP-202ENST00000320017 MRC2Q9UBG0 1479 aa20.33■□□□□ 0.84
SCAP-202ENST00000320017 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
SCAP-202ENST00000320017 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
SCAP-202ENST00000320017 TONSLQ96HA7 1378 aa20.29■□□□□ 0.84
SCAP-202ENST00000320017 FOXD1Q16676 465 aa20.27■□□□□ 0.84
SCAP-202ENST00000320017 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
SCAP-202ENST00000320017 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
SCAP-202ENST00000320017 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
SCAP-202ENST00000320017 WASHC2AQ641Q2 1341 aa20.18■□□□□ 0.82
SCAP-202ENST00000320017 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
SCAP-202ENST00000320017 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
SCAP-202ENST00000320017 GLIPR1L2Q4G1C9 344 aa20.17■□□□□ 0.82
SCAP-202ENST00000320017 VSIG10Q8N0Z9 540 aa20.16■□□□□ 0.82
SCAP-202ENST00000320017 PCF11O94913 1555 aaKnown RBP20.15■□□□□ 0.82
SCAP-202ENST00000320017 SNAPC4Q5SXM2 1469 aa20.15■□□□□ 0.82
SCAP-202ENST00000320017 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
SCAP-202ENST00000320017 MRS2Q9HD23 443 aa20.14■□□□□ 0.82
SCAP-202ENST00000320017 CCDC184Q52MB2 194 aa20.13■□□□□ 0.81
SCAP-202ENST00000320017 PPM1GO15355 546 aaPredicted RBP20.12■□□□□ 0.81
SCAP-202ENST00000320017 GSE1Q14687 1217 aa20.11■□□□□ 0.81
SCAP-202ENST00000320017 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
SCAP-202ENST00000320017 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms