RNA–Protein interactions for RNA: ENST00000317578.6

SIX5-201, Transcript of SIX homeobox 5, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SIX5, Length 3,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5-201ENST00000317578 ERICH6Q7L0X2 663 aa27.61■■■□□ 2.01
SIX5-201ENST00000317578 CLSPNQ9HAW4 1339 aa27.58■■■□□ 2.01
SIX5-201ENST00000317578 KIF21BO75037 1637 aa27.56■■■□□ 2
SIX5-201ENST00000317578 ARAP1Q96P48 1450 aa27.53■■■□□ 2
SIX5-201ENST00000317578 PRXQ9BXM0 1461 aa27.52■■■□□ 2
SIX5-201ENST00000317578 CHIC2Q9UKJ5 165 aa27.47■■□□□ 1.99
SIX5-201ENST00000317578 RBM19Q9Y4C8 960 aaKnown RBP27.47■■□□□ 1.99
SIX5-201ENST00000317578 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
SIX5-201ENST00000317578 FKBP8Q14318 412 aa27.45■■□□□ 1.98
SIX5-201ENST00000317578 HIRIP3Q9BW71 556 aaPredicted RBP27.4■■□□□ 1.98
SIX5-201ENST00000317578 ARHGAP35Q9NRY4 1499 aa27.35■■□□□ 1.97
SIX5-201ENST00000317578 POLA1P09884 1462 aaPredicted RBP27.34■■□□□ 1.97
SIX5-201ENST00000317578 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
SIX5-201ENST00000317578 SIN3AQ96ST3 1273 aa27.33■■□□□ 1.97
SIX5-201ENST00000317578 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
SIX5-201ENST00000317578 AQRO60306 1485 aaKnown RBP eCLIP27.3■■□□□ 1.966e-6■■■■□ 25.1
SIX5-201ENST00000317578 ANO8Q9HCE9 1232 aaPredicted RBP27.3■■□□□ 1.96
SIX5-201ENST00000317578 CCNB3Q8WWL7 1395 aa27.28■■□□□ 1.96
SIX5-201ENST00000317578 NEFLP07196 543 aa27.28■■□□□ 1.96
SIX5-201ENST00000317578 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
SIX5-201ENST00000317578 TRIM52Q96A61 297 aa27.27■■□□□ 1.96
SIX5-201ENST00000317578 MTUS2Q5JR59 1369 aa27.27■■□□□ 1.96
SIX5-201ENST00000317578 BIVM-ERCC5R4GMW8 1640 aa27.26■■□□□ 1.95
SIX5-201ENST00000317578 ZNF777Q9ULD5 760 aaPredicted RBP27.25■■□□□ 1.95
SIX5-201ENST00000317578 RRP7BPQ9NSQ0 103 aa27.24■■□□□ 1.95
SIX5-201ENST00000317578 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
SIX5-201ENST00000317578 CNGB1Q14028 1251 aaPredicted RBP27.18■■□□□ 1.94
SIX5-201ENST00000317578 MSH5O43196 834 aa27.17■■□□□ 1.94
SIX5-201ENST00000317578 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
SIX5-201ENST00000317578 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.94
SIX5-201ENST00000317578 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
SIX5-201ENST00000317578 KCNH8Q96L42 1107 aa27.12■■□□□ 1.93
SIX5-201ENST00000317578 PHLDB1Q86UU1 1377 aa27.11■■□□□ 1.93
SIX5-201ENST00000317578 DEKP35659 375 aaKnown RBP27.1■■□□□ 1.93
SIX5-201ENST00000317578 CCDC136Q96JN2 1154 aa27.08■■□□□ 1.93
SIX5-201ENST00000317578 RAB3GAP2Q9H2M9 1393 aa27.06■■□□□ 1.92
SIX5-201ENST00000317578 DHX57Q6P158 1386 aaKnown RBP27.03■■□□□ 1.92
SIX5-201ENST00000317578 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
SIX5-201ENST00000317578 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
SIX5-201ENST00000317578 FOXD1Q16676 465 aa26.98■■□□□ 1.91
SIX5-201ENST00000317578 DDX10Q13206 875 aaKnown RBP26.96■■□□□ 1.91
SIX5-201ENST00000317578 ABCA10Q8WWZ4 1543 aa26.94■■□□□ 1.9
SIX5-201ENST00000317578 NBR1Q14596 966 aa26.93■■□□□ 1.9
SIX5-201ENST00000317578 SALL2Q9Y467 1007 aaPredicted RBP26.93■■□□□ 1.9
SIX5-201ENST00000317578 POLR3GLQ9BT43 218 aa26.92■■□□□ 1.9
SIX5-201ENST00000317578 ZNF326Q5BKZ1 582 aaKnown RBP26.9■■□□□ 1.9
SIX5-201ENST00000317578 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.9
SIX5-201ENST00000317578 LRRC9Q6ZRR7 1453 aa26.87■■□□□ 1.89
SIX5-201ENST00000317578 RTN4Q9NQC3 1192 aaKnown RBP26.87■■□□□ 1.89
SIX5-201ENST00000317578 CDK11AQ9UQ88 783 aaPredicted RBP26.84■■□□□ 1.89
SIX5-201ENST00000317578 ZNF644Q9H582 1327 aaPredicted RBP26.83■■□□□ 1.89
SIX5-201ENST00000317578 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
SIX5-201ENST00000317578 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
SIX5-201ENST00000317578 FMN1Q68DA7 1419 aa26.81■■□□□ 1.88
SIX5-201ENST00000317578 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.8■■□□□ 1.88
SIX5-201ENST00000317578 IRX6P78412 446 aaPredicted RBP26.78■■□□□ 1.88
SIX5-201ENST00000317578 MYT1LQ9UL68 1186 aa26.77■■□□□ 1.88
SIX5-201ENST00000317578 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
SIX5-201ENST00000317578 RRBP1Q9P2E9 1410 aaKnown RBP26.75■■□□□ 1.87
SIX5-201ENST00000317578 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
SIX5-201ENST00000317578 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
SIX5-201ENST00000317578 TONSLQ96HA7 1378 aa26.71■■□□□ 1.87
SIX5-201ENST00000317578 CFDP1Q9UEE9 299 aaPredicted RBP26.7■■□□□ 1.86
SIX5-201ENST00000317578 TIAM1Q13009 1591 aa26.7■■□□□ 1.86
SIX5-201ENST00000317578 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
SIX5-201ENST00000317578 FANCIQ9NVI1 1328 aa26.68■■□□□ 1.86
SIX5-201ENST00000317578 CASKIN1Q8WXD9 1431 aa26.66■■□□□ 1.86
SIX5-201ENST00000317578 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
SIX5-201ENST00000317578 SLC4A1APQ9BWU0 796 aaKnown RBP26.6■■□□□ 1.85
SIX5-201ENST00000317578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.59■■□□□ 1.85
SIX5-201ENST00000317578 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
SIX5-201ENST00000317578 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
SIX5-201ENST00000317578 FGD6Q6ZV73 1430 aa26.58■■□□□ 1.85
SIX5-201ENST00000317578 RTL5Q5HYW3 569 aaPredicted RBP26.57■■□□□ 1.84
SIX5-201ENST00000317578 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
SIX5-201ENST00000317578 SENP3-EIF4A1A0A087X0R7 540 aa26.55■■□□□ 1.84
SIX5-201ENST00000317578 PRDM2Q13029 1718 aa26.54■■□□□ 1.84
SIX5-201ENST00000317578 NCOA2Q15596 1464 aa26.54■■□□□ 1.84
SIX5-201ENST00000317578 IL27Q8NEV9 243 aa26.54■■□□□ 1.84
SIX5-201ENST00000317578 EIF5BO60841 1220 aaKnown RBP26.53■■□□□ 1.84
SIX5-201ENST00000317578 KDM2AQ9Y2K7 1162 aa26.52■■□□□ 1.84
SIX5-201ENST00000317578 FYCO1Q9BQS8 1478 aa26.5■■□□□ 1.83
SIX5-201ENST00000317578 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
SIX5-201ENST00000317578 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
SIX5-201ENST00000317578 HNRNPMP52272 730 aaKnown RBP eCLIP26.47■■□□□ 1.83
SIX5-201ENST00000317578 MPHOSPH9Q99550 1183 aa26.46■■□□□ 1.83
SIX5-201ENST00000317578 NOP58Q9Y2X3 529 aaKnown RBP26.43■■□□□ 1.82
SIX5-201ENST00000317578 ERICH6BQ5W0A0 696 aa26.42■■□□□ 1.82
SIX5-201ENST00000317578 MYOM3Q5VTT5 1437 aa26.42■■□□□ 1.82
SIX5-201ENST00000317578 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
SIX5-201ENST00000317578 PRG4Q92954 1404 aaPredicted RBP26.41■■□□□ 1.82
SIX5-201ENST00000317578 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
SIX5-201ENST00000317578 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
SIX5-201ENST00000317578 CUL7Q14999 1698 aa26.41■■□□□ 1.82
SIX5-201ENST00000317578 ANP32CO43423 234 aa26.39■■□□□ 1.82
SIX5-201ENST00000317578 EFCAB5A4FU69 1503 aa26.38■■□□□ 1.81
SIX5-201ENST00000317578 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
SIX5-201ENST00000317578 RGL3Q3MIN7 710 aa26.37■■□□□ 1.81
SIX5-201ENST00000317578 PLB1Q6P1J6 1458 aa26.37■■□□□ 1.81
SIX5-201ENST00000317578 PAK3O75914 559 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms