RNA–Protein interactions for RNA: ENST00000311481.10

RAB1B-201, Transcript of RAB1B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1B, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1B-201ENST00000311481 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
RAB1B-201ENST00000311481 WDR97A6NE52 1622 aa30.51■■■□□ 2.47
RAB1B-201ENST00000311481 CFAP43Q8NDM7 1665 aa30.48■■■□□ 2.47
RAB1B-201ENST00000311481 LRRC9Q6ZRR7 1453 aa30.47■■■□□ 2.47
RAB1B-201ENST00000311481 EFCAB5A4FU69 1503 aa30.46■■■□□ 2.47
RAB1B-201ENST00000311481 ACIN1Q9UKV3 1341 aaKnown RBP30.46■■■□□ 2.47
RAB1B-201ENST00000311481 ERCC6Q03468 1493 aa30.46■■■□□ 2.47
RAB1B-201ENST00000311481 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
RAB1B-201ENST00000311481 CTTNBP2Q8WZ74 1663 aa30.44■■■□□ 2.46
RAB1B-201ENST00000311481 PCF11O94913 1555 aaKnown RBP30.42■■■□□ 2.46
RAB1B-201ENST00000311481 ABCA5Q8WWZ7 1642 aa30.36■■■□□ 2.45
RAB1B-201ENST00000311481 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.452e-10■■■■■ 41.6
RAB1B-201ENST00000311481 CENPBP07199 599 aaPredicted RBP30.35■■■□□ 2.45
RAB1B-201ENST00000311481 NEUROD1Q13562 356 aa30.35■■■□□ 2.45
RAB1B-201ENST00000311481 FYCO1Q9BQS8 1478 aa30.34■■■□□ 2.45
RAB1B-201ENST00000311481 FHOD3Q2V2M9 1422 aa30.31■■■□□ 2.44
RAB1B-201ENST00000311481 CASKIN1Q8WXD9 1431 aa30.31■■■□□ 2.44
RAB1B-201ENST00000311481 PHLDB1Q86UU1 1377 aa30.29■■■□□ 2.44
RAB1B-201ENST00000311481 MRC2Q9UBG0 1479 aa30.27■■■□□ 2.44
RAB1B-201ENST00000311481 P3H3Q8IVL6 736 aa30.25■■■□□ 2.43
RAB1B-201ENST00000311481 GAPVD1Q14C86 1478 aa30.23■■■□□ 2.43
RAB1B-201ENST00000311481 RAB3GAP2Q9H2M9 1393 aa30.21■■■□□ 2.43
RAB1B-201ENST00000311481 FMN1Q68DA7 1419 aa30.2■■■□□ 2.42
RAB1B-201ENST00000311481 ITGAEP38570 1179 aa30.19■■■□□ 2.42
RAB1B-201ENST00000311481 SAMD9Q5K651 1589 aa30.19■■■□□ 2.42
RAB1B-201ENST00000311481 TDRD9Q8NDG6 1382 aaKnown RBP30.18■■■□□ 2.42
RAB1B-201ENST00000311481 SETD5Q9C0A6 1442 aa30.18■■■□□ 2.42
RAB1B-201ENST00000311481 THOC2Q8NI27 1593 aaKnown RBP30.17■■■□□ 2.42
RAB1B-201ENST00000311481 MIER1Q8N108 512 aa30.17■■■□□ 2.42
RAB1B-201ENST00000311481 SNAPC4Q5SXM2 1469 aa30.15■■■□□ 2.42
RAB1B-201ENST00000311481 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.14■■■□□ 2.423e-7■■□□□ 11.7
RAB1B-201ENST00000311481 TARBP1Q13395 1621 aaKnown RBP30.14■■■□□ 2.41
RAB1B-201ENST00000311481 WDR62O43379 1518 aa30.12■■■□□ 2.41
RAB1B-201ENST00000311481 MAPKBP1O60336 1514 aa30.12■■■□□ 2.41
RAB1B-201ENST00000311481 ATP1B4Q9UN42 357 aaPredicted RBP30.08■■■□□ 2.41
RAB1B-201ENST00000311481 FAM50AQ14320 339 aaKnown RBP30.05■■■□□ 2.4
RAB1B-201ENST00000311481 LRRIQ1Q96JM4 1722 aa30.01■■■□□ 2.39
RAB1B-201ENST00000311481 GRIN2BQ13224 1484 aa30■■■□□ 2.39
RAB1B-201ENST00000311481 GTF3C3Q9Y5Q9 886 aa29.99■■■□□ 2.39
RAB1B-201ENST00000311481 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
RAB1B-201ENST00000311481 FGD6Q6ZV73 1430 aa29.96■■■□□ 2.39
RAB1B-201ENST00000311481 MTUS2Q5JR59 1369 aa29.91■■■□□ 2.38
RAB1B-201ENST00000311481 YTHDC1Q96MU7 727 aaKnown RBP29.88■■■□□ 2.37
RAB1B-201ENST00000311481 ADAMTS12P58397 1594 aa29.87■■■□□ 2.37
RAB1B-201ENST00000311481 EHBP1L1Q8N3D4 1523 aa29.86■■■□□ 2.37
RAB1B-201ENST00000311481 SUPT6HQ7KZ85 1726 aaKnown RBP29.85■■■□□ 2.37
RAB1B-201ENST00000311481 NCOA2Q15596 1464 aa29.84■■■□□ 2.37
RAB1B-201ENST00000311481 PELP1Q8IZL8 1130 aaKnown RBP29.82■■■□□ 2.36
RAB1B-201ENST00000311481 TIMELESSQ9UNS1 1208 aa29.81■■■□□ 2.36
RAB1B-201ENST00000311481 IQGAP2Q13576 1575 aa29.81■■■□□ 2.36
RAB1B-201ENST00000311481 MYOM3Q5VTT5 1437 aa29.81■■■□□ 2.36
RAB1B-201ENST00000311481 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
RAB1B-201ENST00000311481 IFT140Q96RY7 1462 aa29.79■■■□□ 2.36
RAB1B-201ENST00000311481 ARHGEF11O15085 1522 aa29.79■■■□□ 2.36
RAB1B-201ENST00000311481 ZNF608Q9ULD9 1512 aaPredicted RBP29.78■■■□□ 2.36
RAB1B-201ENST00000311481 UGGT2Q9NYU1 1516 aa29.76■■■□□ 2.36
RAB1B-201ENST00000311481 HECW1Q76N89 1606 aa29.75■■■□□ 2.35
RAB1B-201ENST00000311481 HFM1A2PYH4 1435 aa29.75■■■□□ 2.35
RAB1B-201ENST00000311481 PTPRKQ15262 1439 aa29.74■■■□□ 2.35
RAB1B-201ENST00000311481 SIN3AQ96ST3 1273 aa29.73■■■□□ 2.35
RAB1B-201ENST00000311481 PTPN23Q9H3S7 1636 aa29.73■■■□□ 2.35
RAB1B-201ENST00000311481 MAGI3Q5TCQ9 1506 aa29.72■■■□□ 2.35
RAB1B-201ENST00000311481 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
RAB1B-201ENST00000311481 TCOF1Q13428 1488 aaKnown RBP29.65■■■□□ 2.34
RAB1B-201ENST00000311481 NAIPQ13075 1403 aa29.64■■■□□ 2.34
RAB1B-201ENST00000311481 EPRSP07814 1512 aaKnown RBP29.64■■■□□ 2.33
RAB1B-201ENST00000311481 PPP1R15AO75807 674 aaPredicted RBP29.58■■■□□ 2.33
RAB1B-201ENST00000311481 EIF4G3O43432 1585 aaKnown RBP29.57■■■□□ 2.32
RAB1B-201ENST00000311481 KIAA0586Q9BVV6 1533 aa29.55■■■□□ 2.32
RAB1B-201ENST00000311481 GCC2Q8IWJ2 1684 aa29.53■■■□□ 2.32
RAB1B-201ENST00000311481 MIA2Q96PC5 1412 aa29.52■■■□□ 2.32
RAB1B-201ENST00000311481 CDK13Q14004 1512 aaKnown RBP29.52■■■□□ 2.32
RAB1B-201ENST00000311481 AKNAQ7Z591 1439 aa29.51■■■□□ 2.31
RAB1B-201ENST00000311481 KIAA0556O60303 1618 aa29.5■■■□□ 2.31
RAB1B-201ENST00000311481 DISP1Q96F81 1524 aa29.48■■■□□ 2.31
RAB1B-201ENST00000311481 GRIN2AQ12879 1464 aa29.46■■■□□ 2.31
RAB1B-201ENST00000311481 TONSLQ96HA7 1378 aa29.45■■■□□ 2.3
RAB1B-201ENST00000311481 RAPGEF6Q8TEU7 1601 aa29.38■■■□□ 2.29
RAB1B-201ENST00000311481 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
RAB1B-201ENST00000311481 NUP153P49790 1475 aaKnown RBP29.36■■■□□ 2.29
RAB1B-201ENST00000311481 KDM5BQ9UGL1 1544 aa29.34■■■□□ 2.29
RAB1B-201ENST00000311481 RRP7BPQ9NSQ0 103 aa29.34■■■□□ 2.29
RAB1B-201ENST00000311481 DDX10Q13206 875 aaKnown RBP29.33■■■□□ 2.29
RAB1B-201ENST00000311481 KDM6BO15054 1643 aa29.32■■■□□ 2.28
RAB1B-201ENST00000311481 DENND4BO75064 1496 aaPredicted RBP29.31■■■□□ 2.28
RAB1B-201ENST00000311481 CHIC2Q9UKJ5 165 aa29.29■■■□□ 2.28
RAB1B-201ENST00000311481 FBLN2P98095 1184 aa29.28■■■□□ 2.28
RAB1B-201ENST00000311481 ROCK1Q13464 1354 aa29.27■■■□□ 2.28
RAB1B-201ENST00000311481 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
RAB1B-201ENST00000311481 DNMT1P26358 1616 aaKnown RBP29.27■■■□□ 2.28
RAB1B-201ENST00000311481 CEP170Q5SW79 1584 aa29.26■■■□□ 2.27
RAB1B-201ENST00000311481 DAPK1P53355 1430 aa29.24■■■□□ 2.27
RAB1B-201ENST00000311481 ARID3CA6NKF2 412 aa29.24■■■□□ 2.27
RAB1B-201ENST00000311481 CHMP7Q8WUX9 453 aaPredicted RBP29.21■■■□□ 2.27
RAB1B-201ENST00000311481 CDK11AQ9UQ88 783 aaPredicted RBP29.21■■■□□ 2.27
RAB1B-201ENST00000311481 KCNH8Q96L42 1107 aa29.2■■■□□ 2.27
RAB1B-201ENST00000311481 ABCC5O15440 1437 aa29.2■■■□□ 2.26
RAB1B-201ENST00000311481 HIRIP3Q9BW71 556 aaPredicted RBP29.19■■■□□ 2.26
RAB1B-201ENST00000311481 TRIM52Q96A61 297 aa29.18■■■□□ 2.26
RAB1B-201ENST00000311481 TROQ12816 1431 aaPredicted RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms