RNA–Protein interactions for RNA: ENST00000311160.13

TNS3-201, Transcript of tensin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNS3, Length 7,618 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-201ENST00000311160 ARID3CA6NKF2 412 aa14.16□□□□□ -0.14
TNS3-201ENST00000311160 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
TNS3-201ENST00000311160 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
TNS3-201ENST00000311160 FKBP8Q14318 412 aa14.14□□□□□ -0.15
TNS3-201ENST00000311160 A0A0U1RQG5 324 aaPredicted RBP14.11□□□□□ -0.15
TNS3-201ENST00000311160 GOLGA2Q08379 1002 aa14.11□□□□□ -0.15
TNS3-201ENST00000311160 CCDC136Q96JN2 1154 aa14.11□□□□□ -0.15
TNS3-201ENST00000311160 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
TNS3-201ENST00000311160 FAM9BQ8IZU0 186 aa14.1□□□□□ -0.15
TNS3-201ENST00000311160 CALRP27797 417 aaKnown RBP14.1□□□□□ -0.15
TNS3-201ENST00000311160 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
TNS3-201ENST00000311160 FGD1P98174 961 aa14.09□□□□□ -0.15
TNS3-201ENST00000311160 NRDCO43847 1150 aa14.07□□□□□ -0.16
TNS3-201ENST00000311160 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
TNS3-201ENST00000311160 BECN1Q14457 450 aa14.06□□□□□ -0.16
TNS3-201ENST00000311160 TNNT3P45378 269 aaPredicted RBP14.05□□□□□ -0.16
TNS3-201ENST00000311160 WDR43Q15061 677 aaKnown RBP eCLIP14.05□□□□□ -0.167e-6■■□□□ 14.2
TNS3-201ENST00000311160 L1TD1Q5T7N2 865 aaKnown RBP14.05□□□□□ -0.16
TNS3-201ENST00000311160 ARID4BQ4LE39 1312 aaPredicted RBP14.05□□□□□ -0.16
TNS3-201ENST00000311160 CASC1Q6TDU7 716 aa14.03□□□□□ -0.16
TNS3-201ENST00000311160 DRC7Q8IY82 874 aa14.02□□□□□ -0.16
TNS3-201ENST00000311160 ARID3AQ99856 593 aa14.02□□□□□ -0.16
TNS3-201ENST00000311160 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
TNS3-201ENST00000311160 HNRNPUQ00839 825 aaKnown RBP eCLIP14.01□□□□□ -0.17
TNS3-201ENST00000311160 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
TNS3-201ENST00000311160 WWC1Q8IX03 1113 aa14□□□□□ -0.17
TNS3-201ENST00000311160 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
TNS3-201ENST00000311160 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
TNS3-201ENST00000311160 KCNJ4P48050 445 aa13.97□□□□□ -0.17
TNS3-201ENST00000311160 TMC1Q8TDI8 760 aa13.96□□□□□ -0.17
TNS3-201ENST00000311160 GOLGA6L4A6NEF3 574 aa13.94□□□□□ -0.18
TNS3-201ENST00000311160 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
TNS3-201ENST00000311160 OS9Q13438 667 aaPredicted RBP13.93□□□□□ -0.18
TNS3-201ENST00000311160 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
TNS3-201ENST00000311160 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.93□□□□□ -0.18
TNS3-201ENST00000311160 IRX6P78412 446 aaPredicted RBP13.91□□□□□ -0.18
TNS3-201ENST00000311160 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
TNS3-201ENST00000311160 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
TNS3-201ENST00000311160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.187e-7■□□□□ 11.2
TNS3-201ENST00000311160 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
TNS3-201ENST00000311160 PPM1GO15355 546 aaPredicted RBP13.88□□□□□ -0.19
TNS3-201ENST00000311160 CEP89Q96ST8 783 aa13.86□□□□□ -0.19
TNS3-201ENST00000311160 GOLGA6L1Q8N7Z2 621 aa13.86□□□□□ -0.19
TNS3-201ENST00000311160 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
TNS3-201ENST00000311160 MSNP26038 577 aaKnown RBP13.85□□□□□ -0.19
TNS3-201ENST00000311160 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
TNS3-201ENST00000311160 CREBRFQ8IUR6 639 aa13.83□□□□□ -0.19
TNS3-201ENST00000311160 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
TNS3-201ENST00000311160 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
TNS3-201ENST00000311160 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
TNS3-201ENST00000311160 FTSJ3Q8IY81 847 aaKnown RBP13.81□□□□□ -0.2
TNS3-201ENST00000311160 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
TNS3-201ENST00000311160 APPP05067 770 aa13.79□□□□□ -0.2
TNS3-201ENST00000311160 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
TNS3-201ENST00000311160 VPS53Q5VIR6 699 aa13.77□□□□□ -0.21
TNS3-201ENST00000311160 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
TNS3-201ENST00000311160 TMX4Q9H1E5 349 aaPredicted RBP13.76□□□□□ -0.21
TNS3-201ENST00000311160 RRP12Q5JTH9 1297 aaKnown RBP13.75□□□□□ -0.21
TNS3-201ENST00000311160 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
TNS3-201ENST00000311160 G3V3G9 751 aa13.71□□□□□ -0.21
TNS3-201ENST00000311160 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
TNS3-201ENST00000311160 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
TNS3-201ENST00000311160 SPRYD3Q8NCJ5 442 aa13.71□□□□□ -0.21
TNS3-201ENST00000311160 PTMSP20962 102 aa13.71□□□□□ -0.22
TNS3-201ENST00000311160 RASSF8Q8NHQ8 419 aa13.7□□□□□ -0.22
TNS3-201ENST00000311160 TONSLQ96HA7 1378 aa13.68□□□□□ -0.22
TNS3-201ENST00000311160 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
TNS3-201ENST00000311160 HSP90B1P14625 803 aaKnown RBP13.67□□□□□ -0.22
TNS3-201ENST00000311160 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
TNS3-201ENST00000311160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.22
TNS3-201ENST00000311160 EIF4G2P78344 907 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNS3-201ENST00000311160 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
TNS3-201ENST00000311160 PES1O00541 588 aaKnown RBP13.65□□□□□ -0.22
TNS3-201ENST00000311160 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
TNS3-201ENST00000311160 RGS3P49796 1198 aa13.64□□□□□ -0.23
TNS3-201ENST00000311160 MARCH6O60337 910 aa13.63□□□□□ -0.23
TNS3-201ENST00000311160 USP35Q9P2H5 1018 aa13.62□□□□□ -0.23
TNS3-201ENST00000311160 TPM4P67936 248 aa13.62□□□□□ -0.23
TNS3-201ENST00000311160 AK7Q96M32 723 aa13.61□□□□□ -0.23
TNS3-201ENST00000311160 FRAT1Q92837 279 aaPredicted RBP13.6□□□□□ -0.23
TNS3-201ENST00000311160 TPM3P06753 285 aa13.6□□□□□ -0.23
TNS3-201ENST00000311160 MCCP23508 829 aa13.6□□□□□ -0.23
TNS3-201ENST00000311160 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNS3-201ENST00000311160 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNS3-201ENST00000311160 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
TNS3-201ENST00000311160 SOX12O15370 315 aa13.58□□□□□ -0.24
TNS3-201ENST00000311160 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
TNS3-201ENST00000311160 CCAR2Q8N163 923 aaKnown RBP13.58□□□□□ -0.24
TNS3-201ENST00000311160 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
TNS3-201ENST00000311160 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
TNS3-201ENST00000311160 PAF1Q8N7H5 531 aa13.55□□□□□ -0.24
TNS3-201ENST00000311160 APBB1O00213 710 aa13.55□□□□□ -0.24
TNS3-201ENST00000311160 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
TNS3-201ENST00000311160 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
TNS3-201ENST00000311160 ABCC9O60706 1549 aa13.53□□□□□ -0.24
TNS3-201ENST00000311160 CHIC2Q9UKJ5 165 aa13.53□□□□□ -0.24
TNS3-201ENST00000311160 CWC22Q9HCG8 908 aaKnown RBP13.52□□□□□ -0.24
TNS3-201ENST00000311160 TPD52L1Q16890 204 aaPredicted RBP13.52□□□□□ -0.25
TNS3-201ENST00000311160 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
TNS3-201ENST00000311160 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms