RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 LRRC9Q6ZRR7 1453 aa29.32■■■□□ 2.28
LRFN4-201ENST00000309602 PDS5BQ9NTI5 1447 aa29.32■■■□□ 2.28
LRFN4-201ENST00000309602 CLSPNQ9HAW4 1339 aa29.32■■■□□ 2.28
LRFN4-201ENST00000309602 PCF11O94913 1555 aaKnown RBP29.32■■■□□ 2.28
LRFN4-201ENST00000309602 FHOD3Q2V2M9 1422 aa29.29■■■□□ 2.28
LRFN4-201ENST00000309602 EFCAB5A4FU69 1503 aa29.28■■■□□ 2.28
LRFN4-201ENST00000309602 CTTNBP2Q8WZ74 1663 aa29.28■■■□□ 2.28
LRFN4-201ENST00000309602 ABCA5Q8WWZ7 1642 aa29.26■■■□□ 2.28
LRFN4-201ENST00000309602 CFAP43Q8NDM7 1665 aa29.26■■■□□ 2.28
LRFN4-201ENST00000309602 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
LRFN4-201ENST00000309602 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
LRFN4-201ENST00000309602 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
LRFN4-201ENST00000309602 ITGAEP38570 1179 aa29.22■■■□□ 2.27
LRFN4-201ENST00000309602 PHLDB1Q86UU1 1377 aa29.21■■■□□ 2.27
LRFN4-201ENST00000309602 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.27
LRFN4-201ENST00000309602 FYCO1Q9BQS8 1478 aa29.18■■■□□ 2.26
LRFN4-201ENST00000309602 ATP1B4Q9UN42 357 aaPredicted RBP29.17■■■□□ 2.26
LRFN4-201ENST00000309602 CASKIN1Q8WXD9 1431 aa29.16■■■□□ 2.26
LRFN4-201ENST00000309602 AQRO60306 1485 aaKnown RBP eCLIP29.15■■■□□ 2.26
LRFN4-201ENST00000309602 ACIN1Q9UKV3 1341 aaKnown RBP29.11■■■□□ 2.25
LRFN4-201ENST00000309602 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
LRFN4-201ENST00000309602 RAB3GAP2Q9H2M9 1393 aa29.09■■■□□ 2.25
LRFN4-201ENST00000309602 NEUROD1Q13562 356 aa29.08■■■□□ 2.25
LRFN4-201ENST00000309602 FMN1Q68DA7 1419 aa29.07■■■□□ 2.24
LRFN4-201ENST00000309602 SAMD9Q5K651 1589 aa29.04■■■□□ 2.24
LRFN4-201ENST00000309602 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
LRFN4-201ENST00000309602 FAM50AQ14320 339 aaKnown RBP29.03■■■□□ 2.24
LRFN4-201ENST00000309602 SETD5Q9C0A6 1442 aa29.01■■■□□ 2.23
LRFN4-201ENST00000309602 CENPBP07199 599 aaPredicted RBP28.99■■■□□ 2.23
LRFN4-201ENST00000309602 MIER1Q8N108 512 aa28.98■■■□□ 2.23
LRFN4-201ENST00000309602 MAPKBP1O60336 1514 aa28.95■■■□□ 2.22
LRFN4-201ENST00000309602 PBRM1Q86U86 1689 aa28.91■■■□□ 2.22
LRFN4-201ENST00000309602 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
LRFN4-201ENST00000309602 LRRIQ1Q96JM4 1722 aa28.89■■■□□ 2.22
LRFN4-201ENST00000309602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.89■■■□□ 2.22
LRFN4-201ENST00000309602 GRIN2BQ13224 1484 aa28.89■■■□□ 2.21
LRFN4-201ENST00000309602 MTUS2Q5JR59 1369 aa28.86■■■□□ 2.21
LRFN4-201ENST00000309602 FGD6Q6ZV73 1430 aa28.85■■■□□ 2.21
LRFN4-201ENST00000309602 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
LRFN4-201ENST00000309602 THOC2Q8NI27 1593 aaKnown RBP28.82■■■□□ 2.2
LRFN4-201ENST00000309602 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
LRFN4-201ENST00000309602 YTHDC1Q96MU7 727 aaKnown RBP28.78■■■□□ 2.2
LRFN4-201ENST00000309602 IQGAP2Q13576 1575 aa28.75■■■□□ 2.19
LRFN4-201ENST00000309602 NCOA2Q15596 1464 aa28.75■■■□□ 2.19
LRFN4-201ENST00000309602 EHBP1L1Q8N3D4 1523 aa28.72■■■□□ 2.19
LRFN4-201ENST00000309602 GTF3C3Q9Y5Q9 886 aa28.72■■■□□ 2.19
LRFN4-201ENST00000309602 MYOM3Q5VTT5 1437 aa28.7■■■□□ 2.19
LRFN4-201ENST00000309602 IFT140Q96RY7 1462 aa28.7■■■□□ 2.19
LRFN4-201ENST00000309602 ZNF608Q9ULD9 1512 aaPredicted RBP28.7■■■□□ 2.18
LRFN4-201ENST00000309602 SUPT6HQ7KZ85 1726 aaKnown RBP28.7■■■□□ 2.18
LRFN4-201ENST00000309602 WDR62O43379 1518 aa28.69■■■□□ 2.18
LRFN4-201ENST00000309602 SIN3AQ96ST3 1273 aa28.68■■■□□ 2.18
LRFN4-201ENST00000309602 PTPRKQ15262 1439 aa28.68■■■□□ 2.18
LRFN4-201ENST00000309602 PELP1Q8IZL8 1130 aaKnown RBP28.68■■■□□ 2.18
LRFN4-201ENST00000309602 MAGI3Q5TCQ9 1506 aa28.67■■■□□ 2.18
LRFN4-201ENST00000309602 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
LRFN4-201ENST00000309602 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.18
LRFN4-201ENST00000309602 HECW1Q76N89 1606 aa28.64■■■□□ 2.17
LRFN4-201ENST00000309602 ARHGEF11O15085 1522 aa28.63■■■□□ 2.17
LRFN4-201ENST00000309602 HFM1A2PYH4 1435 aa28.6■■■□□ 2.17
LRFN4-201ENST00000309602 EPRSP07814 1512 aaKnown RBP28.58■■■□□ 2.17
LRFN4-201ENST00000309602 PTPN23Q9H3S7 1636 aa28.58■■■□□ 2.17
LRFN4-201ENST00000309602 CDK13Q14004 1512 aaKnown RBP28.53■■■□□ 2.16
LRFN4-201ENST00000309602 NAIPQ13075 1403 aa28.53■■■□□ 2.16
LRFN4-201ENST00000309602 TIMELESSQ9UNS1 1208 aa28.52■■■□□ 2.16
LRFN4-201ENST00000309602 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
LRFN4-201ENST00000309602 KIAA0586Q9BVV6 1533 aa28.5■■■□□ 2.15
LRFN4-201ENST00000309602 UACAQ9BZF9 1416 aa28.49■■■□□ 2.15
LRFN4-201ENST00000309602 TCOF1Q13428 1488 aaKnown RBP28.48■■■□□ 2.15
LRFN4-201ENST00000309602 DISP1Q96F81 1524 aa28.46■■■□□ 2.15
LRFN4-201ENST00000309602 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
LRFN4-201ENST00000309602 KIAA0556O60303 1618 aa28.46■■■□□ 2.15
LRFN4-201ENST00000309602 ARID3CA6NKF2 412 aa28.45■■■□□ 2.14
LRFN4-201ENST00000309602 PPP1R15AO75807 674 aaPredicted RBP28.42■■■□□ 2.14
LRFN4-201ENST00000309602 MIA2Q96PC5 1412 aa28.38■■■□□ 2.13
LRFN4-201ENST00000309602 RRP7BPQ9NSQ0 103 aa28.36■■■□□ 2.13
LRFN4-201ENST00000309602 CHIC2Q9UKJ5 165 aa28.35■■■□□ 2.13
LRFN4-201ENST00000309602 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
LRFN4-201ENST00000309602 NUP153P49790 1475 aaKnown RBP28.34■■■□□ 2.13
LRFN4-201ENST00000309602 GCC2Q8IWJ2 1684 aa28.34■■■□□ 2.13
LRFN4-201ENST00000309602 TONSLQ96HA7 1378 aa28.33■■■□□ 2.13
LRFN4-201ENST00000309602 RAPGEF6Q8TEU7 1601 aa28.31■■■□□ 2.12
LRFN4-201ENST00000309602 AKNAQ7Z591 1439 aa28.31■■■□□ 2.12
LRFN4-201ENST00000309602 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
LRFN4-201ENST00000309602 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
LRFN4-201ENST00000309602 CHMP7Q8WUX9 453 aaPredicted RBP28.27■■■□□ 2.12
LRFN4-201ENST00000309602 KDM6BO15054 1643 aa28.26■■■□□ 2.11
LRFN4-201ENST00000309602 DDX10Q13206 875 aaKnown RBP28.24■■■□□ 2.11
LRFN4-201ENST00000309602 HIRIP3Q9BW71 556 aaPredicted RBP28.22■■■□□ 2.11
LRFN4-201ENST00000309602 DENND4BO75064 1496 aaPredicted RBP28.22■■■□□ 2.11
LRFN4-201ENST00000309602 FBLN2P98095 1184 aa28.19■■■□□ 2.1
LRFN4-201ENST00000309602 KDM5BQ9UGL1 1544 aa28.19■■■□□ 2.1
LRFN4-201ENST00000309602 TRIM52Q96A61 297 aa28.18■■■□□ 2.1
LRFN4-201ENST00000309602 DAPK1P53355 1430 aa28.17■■■□□ 2.1
LRFN4-201ENST00000309602 CDK11AQ9UQ88 783 aaPredicted RBP28.17■■■□□ 2.1
LRFN4-201ENST00000309602 NUP160Q12769 1436 aa28.16■■■□□ 2.1
LRFN4-201ENST00000309602 PLB1Q6P1J6 1458 aa28.16■■■□□ 2.1
LRFN4-201ENST00000309602 KCNH8Q96L42 1107 aa28.14■■■□□ 2.1
LRFN4-201ENST00000309602 ZNF644Q9H582 1327 aaPredicted RBP28.14■■■□□ 2.1
LRFN4-201ENST00000309602 DNMT1P26358 1616 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms