RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
FOXP4-201ENST00000307972 CUX2O14529 1486 aa16.56■□□□□ 0.24
FOXP4-201ENST00000307972 CUX1P39880 1505 aa16.55■□□□□ 0.24
FOXP4-201ENST00000307972 MAPKBP1O60336 1514 aa16.49■□□□□ 0.23
FOXP4-201ENST00000307972 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
FOXP4-201ENST00000307972 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
FOXP4-201ENST00000307972 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
FOXP4-201ENST00000307972 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
FOXP4-201ENST00000307972 TIMELESSQ9UNS1 1208 aa16.45■□□□□ 0.22
FOXP4-201ENST00000307972 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
FOXP4-201ENST00000307972 IGF1RP08069 1367 aa16.44■□□□□ 0.22
FOXP4-201ENST00000307972 PPP1R15AO75807 674 aaPredicted RBP16.44■□□□□ 0.22
FOXP4-201ENST00000307972 LRRC9Q6ZRR7 1453 aa16.44■□□□□ 0.22
FOXP4-201ENST00000307972 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
FOXP4-201ENST00000307972 CCER2I3L3R5 266 aa16.43■□□□□ 0.22
FOXP4-201ENST00000307972 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
FOXP4-201ENST00000307972 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
FOXP4-201ENST00000307972 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
FOXP4-201ENST00000307972 CFTRP13569 1480 aa16.39■□□□□ 0.21
FOXP4-201ENST00000307972 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.216e-7■■□□□ 14.5
FOXP4-201ENST00000307972 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
FOXP4-201ENST00000307972 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
FOXP4-201ENST00000307972 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
FOXP4-201ENST00000307972 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
FOXP4-201ENST00000307972 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
FOXP4-201ENST00000307972 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
FOXP4-201ENST00000307972 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
FOXP4-201ENST00000307972 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
FOXP4-201ENST00000307972 MTUS2Q5JR59 1369 aa16.29■□□□□ 0.2
FOXP4-201ENST00000307972 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
FOXP4-201ENST00000307972 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
FOXP4-201ENST00000307972 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
FOXP4-201ENST00000307972 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
FOXP4-201ENST00000307972 CHIC2Q9UKJ5 165 aa16.2■□□□□ 0.18
FOXP4-201ENST00000307972 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
FOXP4-201ENST00000307972 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
FOXP4-201ENST00000307972 CFAP43Q8NDM7 1665 aa16.19■□□□□ 0.18
FOXP4-201ENST00000307972 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
FOXP4-201ENST00000307972 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
FOXP4-201ENST00000307972 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
FOXP4-201ENST00000307972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.17■□□□□ 0.18
FOXP4-201ENST00000307972 HSPA5P11021 654 aaKnown RBP16.17■□□□□ 0.18
FOXP4-201ENST00000307972 FMN1Q68DA7 1419 aa16.16■□□□□ 0.18
FOXP4-201ENST00000307972 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■■□□ 17
FOXP4-201ENST00000307972 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
FOXP4-201ENST00000307972 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
FOXP4-201ENST00000307972 MSH5O43196 834 aa16.13■□□□□ 0.17
FOXP4-201ENST00000307972 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
FOXP4-201ENST00000307972 MRS2Q9HD23 443 aa16.12■□□□□ 0.17
FOXP4-201ENST00000307972 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
FOXP4-201ENST00000307972 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
FOXP4-201ENST00000307972 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
FOXP4-201ENST00000307972 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
FOXP4-201ENST00000307972 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
FOXP4-201ENST00000307972 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
FOXP4-201ENST00000307972 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
FOXP4-201ENST00000307972 NAIPQ13075 1403 aa16.08■□□□□ 0.16
FOXP4-201ENST00000307972 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.165e-7■■■■■ 36.1
FOXP4-201ENST00000307972 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
FOXP4-201ENST00000307972 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
FOXP4-201ENST00000307972 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
FOXP4-201ENST00000307972 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
FOXP4-201ENST00000307972 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
FOXP4-201ENST00000307972 PTPN23Q9H3S7 1636 aa16.06■□□□□ 0.16
FOXP4-201ENST00000307972 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
FOXP4-201ENST00000307972 ERICH6BQ5W0A0 696 aa16.05■□□□□ 0.16
FOXP4-201ENST00000307972 CCDC184Q52MB2 194 aa16.05■□□□□ 0.16
FOXP4-201ENST00000307972 FOXD1Q16676 465 aa16.04■□□□□ 0.16
FOXP4-201ENST00000307972 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
FOXP4-201ENST00000307972 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.15
FOXP4-201ENST00000307972 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.15
FOXP4-201ENST00000307972 MPHOSPH9Q99550 1183 aa16.01■□□□□ 0.15
FOXP4-201ENST00000307972 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
FOXP4-201ENST00000307972 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
FOXP4-201ENST00000307972 CNTLNQ9NXG0 1405 aa16■□□□□ 0.15
FOXP4-201ENST00000307972 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
FOXP4-201ENST00000307972 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
FOXP4-201ENST00000307972 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
FOXP4-201ENST00000307972 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.15
FOXP4-201ENST00000307972 CUL7Q14999 1698 aa15.96■□□□□ 0.14
FOXP4-201ENST00000307972 CTTNBP2Q8WZ74 1663 aa15.96■□□□□ 0.14
FOXP4-201ENST00000307972 ZBED9Q6R2W3 1325 aa15.95■□□□□ 0.14
FOXP4-201ENST00000307972 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
FOXP4-201ENST00000307972 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
FOXP4-201ENST00000307972 SUPT6HQ7KZ85 1726 aaKnown RBP15.95■□□□□ 0.14
FOXP4-201ENST00000307972 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
FOXP4-201ENST00000307972 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
FOXP4-201ENST00000307972 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
FOXP4-201ENST00000307972 NBR1Q14596 966 aa15.93■□□□□ 0.14
FOXP4-201ENST00000307972 MYT1LQ9UL68 1186 aa15.93■□□□□ 0.14
FOXP4-201ENST00000307972 CCDC136Q96JN2 1154 aa15.92■□□□□ 0.14
FOXP4-201ENST00000307972 NESP48681 1621 aa15.9■□□□□ 0.14
FOXP4-201ENST00000307972 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
FOXP4-201ENST00000307972 NOP58Q9Y2X3 529 aaKnown RBP15.89■□□□□ 0.13
FOXP4-201ENST00000307972 NBPF8Q3BBV2 869 aa15.89■□□□□ 0.13
FOXP4-201ENST00000307972 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
FOXP4-201ENST00000307972 KIF7Q2M1P5 1343 aa15.88■□□□□ 0.13
FOXP4-201ENST00000307972 DEKP35659 375 aaKnown RBP15.88■□□□□ 0.13
FOXP4-201ENST00000307972 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
FOXP4-201ENST00000307972 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms