RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 NISCHQ9Y2I1 1504 aa22.85■■□□□ 1.25
FOXP4-201ENST00000307972 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
FOXP4-201ENST00000307972 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.79
FOXP4-201ENST00000307972 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
FOXP4-201ENST00000307972 HRCP23327 699 aa19.41■□□□□ 0.7
FOXP4-201ENST00000307972 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
FOXP4-201ENST00000307972 PCGF6Q9BYE7 350 aa19.35■□□□□ 0.69
FOXP4-201ENST00000307972 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
FOXP4-201ENST00000307972 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
FOXP4-201ENST00000307972 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
FOXP4-201ENST00000307972 PPARGC1BQ86YN6 1023 aaKnown RBP19.07■□□□□ 0.64
FOXP4-201ENST00000307972 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
FOXP4-201ENST00000307972 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
FOXP4-201ENST00000307972 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.59
FOXP4-201ENST00000307972 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
FOXP4-201ENST00000307972 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
FOXP4-201ENST00000307972 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
FOXP4-201ENST00000307972 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
FOXP4-201ENST00000307972 ABCC9O60706 1549 aa18.3■□□□□ 0.52
FOXP4-201ENST00000307972 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
FOXP4-201ENST00000307972 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
FOXP4-201ENST00000307972 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
FOXP4-201ENST00000307972 RB1CC1Q8TDY2 1594 aa18.13■□□□□ 0.49
FOXP4-201ENST00000307972 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
FOXP4-201ENST00000307972 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
FOXP4-201ENST00000307972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
FOXP4-201ENST00000307972 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
FOXP4-201ENST00000307972 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
FOXP4-201ENST00000307972 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
FOXP4-201ENST00000307972 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
FOXP4-201ENST00000307972 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
FOXP4-201ENST00000307972 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
FOXP4-201ENST00000307972 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
FOXP4-201ENST00000307972 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
FOXP4-201ENST00000307972 WIZO95785 1651 aa17.75■□□□□ 0.43
FOXP4-201ENST00000307972 UBTFP17480 764 aaKnown RBP17.7■□□□□ 0.42
FOXP4-201ENST00000307972 NACADO15069 1562 aa17.7■□□□□ 0.42
FOXP4-201ENST00000307972 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
FOXP4-201ENST00000307972 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
FOXP4-201ENST00000307972 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.4
FOXP4-201ENST00000307972 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
FOXP4-201ENST00000307972 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
FOXP4-201ENST00000307972 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
FOXP4-201ENST00000307972 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
FOXP4-201ENST00000307972 HNRNPUL2Q1KMD3 747 aaKnown RBP17.52■□□□□ 0.39
FOXP4-201ENST00000307972 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
FOXP4-201ENST00000307972 SOGA1O94964 1423 aa17.5■□□□□ 0.39
FOXP4-201ENST00000307972 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
FOXP4-201ENST00000307972 APLP2Q06481 763 aa17.46■□□□□ 0.39
FOXP4-201ENST00000307972 MYT1Q01538 1121 aa17.43■□□□□ 0.38
FOXP4-201ENST00000307972 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
FOXP4-201ENST00000307972 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
FOXP4-201ENST00000307972 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
FOXP4-201ENST00000307972 EEA1Q15075 1411 aa17.4■□□□□ 0.38
FOXP4-201ENST00000307972 MIER1Q8N108 512 aa17.37■□□□□ 0.37
FOXP4-201ENST00000307972 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
FOXP4-201ENST00000307972 GOLGA3Q08378 1498 aa17.36■□□□□ 0.37
FOXP4-201ENST00000307972 SMARCA2P51531 1590 aa17.33■□□□□ 0.36
FOXP4-201ENST00000307972 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
FOXP4-201ENST00000307972 CLIP1P30622 1438 aa17.25■□□□□ 0.35
FOXP4-201ENST00000307972 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
FOXP4-201ENST00000307972 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
FOXP4-201ENST00000307972 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
FOXP4-201ENST00000307972 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
FOXP4-201ENST00000307972 KIF21BO75037 1637 aa17.03■□□□□ 0.32
FOXP4-201ENST00000307972 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
FOXP4-201ENST00000307972 ITGAEP38570 1179 aa17.01■□□□□ 0.31
FOXP4-201ENST00000307972 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
FOXP4-201ENST00000307972 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
FOXP4-201ENST00000307972 CLSPNQ9HAW4 1339 aa16.97■□□□□ 0.31
FOXP4-201ENST00000307972 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
FOXP4-201ENST00000307972 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
FOXP4-201ENST00000307972 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
FOXP4-201ENST00000307972 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
FOXP4-201ENST00000307972 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
FOXP4-201ENST00000307972 BICRAQ9NZM4 1560 aa16.8■□□□□ 0.28
FOXP4-201ENST00000307972 BCANQ96GW7 911 aa16.8■□□□□ 0.28
FOXP4-201ENST00000307972 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
FOXP4-201ENST00000307972 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
FOXP4-201ENST00000307972 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
FOXP4-201ENST00000307972 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
FOXP4-201ENST00000307972 KCNH8Q96L42 1107 aa16.73■□□□□ 0.27
FOXP4-201ENST00000307972 TSHZ2Q9NRE2 1034 aa16.73■□□□□ 0.27
FOXP4-201ENST00000307972 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
FOXP4-201ENST00000307972 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
FOXP4-201ENST00000307972 PRXQ9BXM0 1461 aa16.71■□□□□ 0.27
FOXP4-201ENST00000307972 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.27
FOXP4-201ENST00000307972 NEFLP07196 543 aa16.71■□□□□ 0.27
FOXP4-201ENST00000307972 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
FOXP4-201ENST00000307972 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
FOXP4-201ENST00000307972 FKBP8Q14318 412 aa16.69■□□□□ 0.26
FOXP4-201ENST00000307972 RAB3GAP2Q9H2M9 1393 aa16.68■□□□□ 0.26
FOXP4-201ENST00000307972 SIN3AQ96ST3 1273 aa16.63■□□□□ 0.25
FOXP4-201ENST00000307972 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
FOXP4-201ENST00000307972 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
FOXP4-201ENST00000307972 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
FOXP4-201ENST00000307972 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
FOXP4-201ENST00000307972 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
FOXP4-201ENST00000307972 ANP32CO43423 234 aa16.58■□□□□ 0.25
FOXP4-201ENST00000307972 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms