RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 NEFLP07196 543 aa19.65■□□□□ 0.74
KARS-201ENST00000302445 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
KARS-201ENST00000302445 FKBP8Q14318 412 aa19.63■□□□□ 0.73
KARS-201ENST00000302445 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
KARS-201ENST00000302445 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
KARS-201ENST00000302445 TIAM1Q13009 1591 aa19.6■□□□□ 0.73
KARS-201ENST00000302445 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
KARS-201ENST00000302445 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
KARS-201ENST00000302445 KIF27Q86VH2 1401 aa19.58■□□□□ 0.73
KARS-201ENST00000302445 NCBP3Q53F19 620 aaKnown RBP19.58■□□□□ 0.72
KARS-201ENST00000302445 PPP1R15AO75807 674 aaPredicted RBP19.55■□□□□ 0.72
KARS-201ENST00000302445 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
KARS-201ENST00000302445 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
KARS-201ENST00000302445 FANCIQ9NVI1 1328 aa19.52■□□□□ 0.71
KARS-201ENST00000302445 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
KARS-201ENST00000302445 SLC4A1APQ9BWU0 796 aaKnown RBP19.51■□□□□ 0.71
KARS-201ENST00000302445 BCANQ96GW7 911 aa19.5■□□□□ 0.71
KARS-201ENST00000302445 MYT1LQ9UL68 1186 aa19.49■□□□□ 0.71
KARS-201ENST00000302445 CUX1P39880 1505 aa19.49■□□□□ 0.71
KARS-201ENST00000302445 LRRC9Q6ZRR7 1453 aa19.46■□□□□ 0.71
KARS-201ENST00000302445 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
KARS-201ENST00000302445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.45■□□□□ 0.7
KARS-201ENST00000302445 MSH5O43196 834 aa19.45■□□□□ 0.7
KARS-201ENST00000302445 ANP32CO43423 234 aa19.45■□□□□ 0.7
KARS-201ENST00000302445 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
KARS-201ENST00000302445 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
KARS-201ENST00000302445 ERICH6BQ5W0A0 696 aa19.43■□□□□ 0.7
KARS-201ENST00000302445 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
KARS-201ENST00000302445 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
KARS-201ENST00000302445 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.69
KARS-201ENST00000302445 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
KARS-201ENST00000302445 ITGAEP38570 1179 aa19.3■□□□□ 0.68
KARS-201ENST00000302445 CFTRP13569 1480 aa19.29■□□□□ 0.68
KARS-201ENST00000302445 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
KARS-201ENST00000302445 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
KARS-201ENST00000302445 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
KARS-201ENST00000302445 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
KARS-201ENST00000302445 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
KARS-201ENST00000302445 AQRO60306 1485 aaKnown RBP eCLIP19.26■□□□□ 0.671e-6■■■■□ 19.3
KARS-201ENST00000302445 FYCO1Q9BQS8 1478 aa19.26■□□□□ 0.67
KARS-201ENST00000302445 ERICH6Q7L0X2 663 aa19.26■□□□□ 0.67
KARS-201ENST00000302445 EFCAB5A4FU69 1503 aa19.25■□□□□ 0.67
KARS-201ENST00000302445 MAPK8IP2Q13387 824 aaPredicted RBP19.23■□□□□ 0.67
KARS-201ENST00000302445 TONSLQ96HA7 1378 aa19.23■□□□□ 0.67
KARS-201ENST00000302445 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
KARS-201ENST00000302445 IGF1RP08069 1367 aa19.21■□□□□ 0.67
KARS-201ENST00000302445 CCDC18Q5T9S5 1454 aa19.18■□□□□ 0.66
KARS-201ENST00000302445 HFM1A2PYH4 1435 aa19.18■□□□□ 0.66
KARS-201ENST00000302445 PPP4R2Q9NY27 417 aa19.17■□□□□ 0.66
KARS-201ENST00000302445 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
KARS-201ENST00000302445 PTPN23Q9H3S7 1636 aa19.17■□□□□ 0.66
KARS-201ENST00000302445 CASKIN1Q8WXD9 1431 aa19.16■□□□□ 0.66
KARS-201ENST00000302445 NCOA2Q15596 1464 aa19.16■□□□□ 0.66
KARS-201ENST00000302445 KDM5BQ9UGL1 1544 aa19.16■□□□□ 0.66
KARS-201ENST00000302445 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
KARS-201ENST00000302445 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
KARS-201ENST00000302445 FGD6Q6ZV73 1430 aa19.13■□□□□ 0.65
KARS-201ENST00000302445 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.65
KARS-201ENST00000302445 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.65
KARS-201ENST00000302445 HECW1Q76N89 1606 aa19.08■□□□□ 0.64
KARS-201ENST00000302445 POLR1AO95602 1720 aaPredicted RBP19.07■□□□□ 0.64
KARS-201ENST00000302445 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
KARS-201ENST00000302445 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
KARS-201ENST00000302445 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
KARS-201ENST00000302445 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
KARS-201ENST00000302445 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
KARS-201ENST00000302445 CUL7Q14999 1698 aa19.04■□□□□ 0.64
KARS-201ENST00000302445 FMN1Q68DA7 1419 aa19.03■□□□□ 0.64
KARS-201ENST00000302445 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
KARS-201ENST00000302445 NAIPQ13075 1403 aa19.02■□□□□ 0.64
KARS-201ENST00000302445 ZBED9Q6R2W3 1325 aa19.02■□□□□ 0.64
KARS-201ENST00000302445 DEKP35659 375 aaKnown RBP19.01■□□□□ 0.63
KARS-201ENST00000302445 AKNAQ7Z591 1439 aa19■□□□□ 0.63
KARS-201ENST00000302445 SNAPC4Q5SXM2 1469 aa18.99■□□□□ 0.63
KARS-201ENST00000302445 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
KARS-201ENST00000302445 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
KARS-201ENST00000302445 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
KARS-201ENST00000302445 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
KARS-201ENST00000302445 NOP58Q9Y2X3 529 aaKnown RBP18.96■□□□□ 0.63
KARS-201ENST00000302445 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
KARS-201ENST00000302445 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
KARS-201ENST00000302445 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
KARS-201ENST00000302445 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
KARS-201ENST00000302445 ZBTB22O15209 634 aa18.95■□□□□ 0.62
KARS-201ENST00000302445 IRX6P78412 446 aaPredicted RBP18.93■□□□□ 0.62
KARS-201ENST00000302445 SAMD9Q5K651 1589 aa18.93■□□□□ 0.62
KARS-201ENST00000302445 EIF4G2P78344 907 aaKnown RBP eCLIP18.91■□□□□ 0.62
KARS-201ENST00000302445 ARHGEF11O15085 1522 aa18.91■□□□□ 0.62
KARS-201ENST00000302445 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
KARS-201ENST00000302445 LRRIQ1Q96JM4 1722 aa18.91■□□□□ 0.62
KARS-201ENST00000302445 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
KARS-201ENST00000302445 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
KARS-201ENST00000302445 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.62
KARS-201ENST00000302445 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
KARS-201ENST00000302445 PRKRIP1Q9H875 184 aaPredicted RBP18.89■□□□□ 0.61
KARS-201ENST00000302445 UGGT2Q9NYU1 1516 aa18.88■□□□□ 0.61
KARS-201ENST00000302445 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
KARS-201ENST00000302445 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
KARS-201ENST00000302445 GRIN2BQ13224 1484 aa18.86■□□□□ 0.61
KARS-201ENST00000302445 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms