RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 CCNB3Q8WWL7 1395 aa35.52■■■■□ 3.28
FOXA3-201ENST00000302177 PELP1Q8IZL8 1130 aaKnown RBP35.52■■■■□ 3.28
FOXA3-201ENST00000302177 DNMBPQ6XZF7 1577 aa35.45■■■■□ 3.27
FOXA3-201ENST00000302177 TIAM1Q13009 1591 aa35.44■■■■□ 3.26
FOXA3-201ENST00000302177 ABCA10Q8WWZ4 1543 aa35.39■■■■□ 3.26
FOXA3-201ENST00000302177 FHAD1B1AJZ9 1412 aa35.39■■■■□ 3.26
FOXA3-201ENST00000302177 TOPBP1Q92547 1522 aa35.34■■■■□ 3.25
FOXA3-201ENST00000302177 LRRC9Q6ZRR7 1453 aa35.3■■■■□ 3.24
FOXA3-201ENST00000302177 MIER1Q8N108 512 aa35.29■■■■□ 3.24
FOXA3-201ENST00000302177 POLA1P09884 1462 aaPredicted RBP35.27■■■■□ 3.24
FOXA3-201ENST00000302177 GTF3C3Q9Y5Q9 886 aa35.25■■■■□ 3.23
FOXA3-201ENST00000302177 CUL7Q14999 1698 aa35.24■■■■□ 3.23
FOXA3-201ENST00000302177 EFCAB5A4FU69 1503 aa35.23■■■■□ 3.23
FOXA3-201ENST00000302177 CFAP43Q8NDM7 1665 aa35.21■■■■□ 3.23
FOXA3-201ENST00000302177 RAD54L2Q9Y4B4 1467 aa35.2■■■■□ 3.23
FOXA3-201ENST00000302177 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.221e-6■■■□□ 16.3
FOXA3-201ENST00000302177 PCF11O94913 1555 aaKnown RBP35.12■■■■□ 3.21
FOXA3-201ENST00000302177 FYCO1Q9BQS8 1478 aa35.12■■■■□ 3.21
FOXA3-201ENST00000302177 RAB3GAP2Q9H2M9 1393 aa35.1■■■■□ 3.21
FOXA3-201ENST00000302177 PHLDB1Q86UU1 1377 aa35.09■■■■□ 3.21
FOXA3-201ENST00000302177 CASKIN1Q8WXD9 1431 aa35.08■■■■□ 3.21
FOXA3-201ENST00000302177 SETD5Q9C0A6 1442 aa35.08■■■■□ 3.21
FOXA3-201ENST00000302177 CTTNBP2Q8WZ74 1663 aa35.06■■■■□ 3.2
FOXA3-201ENST00000302177 WDR97A6NE52 1622 aa35.06■■■■□ 3.2
FOXA3-201ENST00000302177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.04■■■■□ 3.2
FOXA3-201ENST00000302177 ITGAEP38570 1179 aa35.02■■■■□ 3.2
FOXA3-201ENST00000302177 IFT140Q96RY7 1462 aa35.01■■■■□ 3.2
FOXA3-201ENST00000302177 FHOD3Q2V2M9 1422 aa34.99■■■■□ 3.19
FOXA3-201ENST00000302177 MAPKBP1O60336 1514 aa34.98■■■■□ 3.19
FOXA3-201ENST00000302177 ZNF608Q9ULD9 1512 aaPredicted RBP34.98■■■■□ 3.19
FOXA3-201ENST00000302177 FMN1Q68DA7 1419 aa34.97■■■■□ 3.19
FOXA3-201ENST00000302177 YTHDC1Q96MU7 727 aaKnown RBP34.96■■■■□ 3.19
FOXA3-201ENST00000302177 P3H3Q8IVL6 736 aa34.94■■■■□ 3.18
FOXA3-201ENST00000302177 ABCA5Q8WWZ7 1642 aa34.92■■■■□ 3.18
FOXA3-201ENST00000302177 TARBP1Q13395 1621 aaKnown RBP34.89■■■■□ 3.18
FOXA3-201ENST00000302177 FAM50AQ14320 339 aaKnown RBP34.85■■■■□ 3.17
FOXA3-201ENST00000302177 TIMELESSQ9UNS1 1208 aa34.85■■■■□ 3.17
FOXA3-201ENST00000302177 TDRD9Q8NDG6 1382 aaKnown RBP34.83■■■■□ 3.17
FOXA3-201ENST00000302177 SNAPC4Q5SXM2 1469 aa34.83■■■■□ 3.17
FOXA3-201ENST00000302177 SAMD9Q5K651 1589 aa34.83■■■■□ 3.17
FOXA3-201ENST00000302177 GAPVD1Q14C86 1478 aa34.82■■■■□ 3.16
FOXA3-201ENST00000302177 ATP1B4Q9UN42 357 aaPredicted RBP34.81■■■■□ 3.16
FOXA3-201ENST00000302177 EIF4G3O43432 1585 aaKnown RBP34.73■■■■□ 3.15
FOXA3-201ENST00000302177 FGD6Q6ZV73 1430 aa34.71■■■■□ 3.15
FOXA3-201ENST00000302177 GRIN2BQ13224 1484 aa34.66■■■■□ 3.14
FOXA3-201ENST00000302177 MTUS2Q5JR59 1369 aa34.65■■■■□ 3.14
FOXA3-201ENST00000302177 HFM1A2PYH4 1435 aa34.54■■■■□ 3.12
FOXA3-201ENST00000302177 SIN3AQ96ST3 1273 aa34.54■■■■□ 3.12
FOXA3-201ENST00000302177 EHBP1L1Q8N3D4 1523 aa34.54■■■■□ 3.12
FOXA3-201ENST00000302177 LRRIQ1Q96JM4 1722 aa34.54■■■■□ 3.12
FOXA3-201ENST00000302177 MYOM3Q5VTT5 1437 aa34.53■■■■□ 3.12
FOXA3-201ENST00000302177 NCOA2Q15596 1464 aa34.53■■■■□ 3.12
FOXA3-201ENST00000302177 SUPT6HQ7KZ85 1726 aaKnown RBP34.51■■■■□ 3.12
FOXA3-201ENST00000302177 CCDC18Q5T9S5 1454 aa34.49■■■■□ 3.11
FOXA3-201ENST00000302177 PPP1R15AO75807 674 aaPredicted RBP34.47■■■■□ 3.11
FOXA3-201ENST00000302177 FBLN2P98095 1184 aa34.47■■■■□ 3.11
FOXA3-201ENST00000302177 DNAJC5Q9H3Z4 198 aa34.47■■■■□ 3.11
FOXA3-201ENST00000302177 ARHGEF11O15085 1522 aa34.46■■■■□ 3.11
FOXA3-201ENST00000302177 UACAQ9BZF9 1416 aa34.45■■■■□ 3.11
FOXA3-201ENST00000302177 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
FOXA3-201ENST00000302177 PTPN23Q9H3S7 1636 aa34.43■■■■□ 3.1
FOXA3-201ENST00000302177 PTPRKQ15262 1439 aa34.42■■■■□ 3.1
FOXA3-201ENST00000302177 UGGT2Q9NYU1 1516 aa34.42■■■■□ 3.1
FOXA3-201ENST00000302177 OSCARQ8IYS5 282 aa34.38■■■■□ 3.09
FOXA3-201ENST00000302177 NAIPQ13075 1403 aa34.37■■■■□ 3.09
FOXA3-201ENST00000302177 HECW1Q76N89 1606 aa34.36■■■■□ 3.09
FOXA3-201ENST00000302177 IQGAP2Q13576 1575 aa34.36■■■■□ 3.09
FOXA3-201ENST00000302177 ADAMTS12P58397 1594 aa34.34■■■■□ 3.09
FOXA3-201ENST00000302177 TCOF1Q13428 1488 aaKnown RBP34.34■■■■□ 3.09
FOXA3-201ENST00000302177 CHMP7Q8WUX9 453 aaPredicted RBP34.31■■■■□ 3.08
FOXA3-201ENST00000302177 MAGI1Q96QZ7 1491 aaPredicted RBP34.3■■■■□ 3.08
FOXA3-201ENST00000302177 MAGI3Q5TCQ9 1506 aa34.28■■■■□ 3.08
FOXA3-201ENST00000302177 TONSLQ96HA7 1378 aa34.27■■■■□ 3.08
FOXA3-201ENST00000302177 AKNAQ7Z591 1439 aa34.25■■■■□ 3.07
FOXA3-201ENST00000302177 CHD1O14646 1710 aa34.24■■■■□ 3.07
FOXA3-201ENST00000302177 EPRSP07814 1512 aaKnown RBP34.24■■■■□ 3.07
FOXA3-201ENST00000302177 MIA2Q96PC5 1412 aa34.23■■■■□ 3.07
FOXA3-201ENST00000302177 DDX10Q13206 875 aaKnown RBP34.22■■■■□ 3.07
FOXA3-201ENST00000302177 SYNJ2O15056 1496 aa34.2■■■■□ 3.07
FOXA3-201ENST00000302177 GCC2Q8IWJ2 1684 aa34.16■■■■□ 3.06
FOXA3-201ENST00000302177 CCER2I3L3R5 266 aa34.12■■■■□ 3.05
FOXA3-201ENST00000302177 SUPT16HQ9Y5B9 1047 aaKnown RBP34.1■■■■□ 3.05
FOXA3-201ENST00000302177 KIAA0586Q9BVV6 1533 aa34.08■■■■□ 3.05
FOXA3-201ENST00000302177 KCNH8Q96L42 1107 aa34.05■■■■□ 3.04
FOXA3-201ENST00000302177 GRIN2AQ12879 1464 aa34.03■■■■□ 3.04
FOXA3-201ENST00000302177 CDK13Q14004 1512 aaKnown RBP34.03■■■■□ 3.04
FOXA3-201ENST00000302177 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
FOXA3-201ENST00000302177 ANP32CO43423 234 aa34■■■■□ 3.03
FOXA3-201ENST00000302177 RRP7BPQ9NSQ0 103 aa33.98■■■■□ 3.03
FOXA3-201ENST00000302177 KIAA0556O60303 1618 aa33.98■■■■□ 3.03
FOXA3-201ENST00000302177 DISP1Q96F81 1524 aa33.96■■■■□ 3.03
FOXA3-201ENST00000302177 ROCK1Q13464 1354 aa33.95■■■■□ 3.03
FOXA3-201ENST00000302177 DENND4BO75064 1496 aaPredicted RBP33.94■■■■□ 3.02
FOXA3-201ENST00000302177 HIRIP3Q9BW71 556 aaPredicted RBP33.92■■■■□ 3.02
FOXA3-201ENST00000302177 CHIC2Q9UKJ5 165 aa33.92■■■■□ 3.02
FOXA3-201ENST00000302177 CDK11AQ9UQ88 783 aaPredicted RBP33.87■■■■□ 3.01
FOXA3-201ENST00000302177 TRIM52Q96A61 297 aa33.86■■■■□ 3.01
FOXA3-201ENST00000302177 MPHOSPH9Q99550 1183 aa33.86■■■■□ 3.01
FOXA3-201ENST00000302177 CEP170Q5SW79 1584 aa33.86■■■■□ 3.01
FOXA3-201ENST00000302177 RAPGEF6Q8TEU7 1601 aa33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms