RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
CNOT9-202ENST00000295701 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
CNOT9-202ENST00000295701 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
CNOT9-202ENST00000295701 CLASP1Q7Z460 1538 aa16.88■□□□□ 0.29
CNOT9-202ENST00000295701 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
CNOT9-202ENST00000295701 WDR97A6NE52 1622 aa16.87■□□□□ 0.29
CNOT9-202ENST00000295701 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
CNOT9-202ENST00000295701 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
CNOT9-202ENST00000295701 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
CNOT9-202ENST00000295701 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
CNOT9-202ENST00000295701 GAPVD1Q14C86 1478 aa16.82■□□□□ 0.28
CNOT9-202ENST00000295701 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
CNOT9-202ENST00000295701 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.28
CNOT9-202ENST00000295701 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
CNOT9-202ENST00000295701 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
CNOT9-202ENST00000295701 CAPN15O75808 1086 aa16.72■□□□□ 0.27
CNOT9-202ENST00000295701 ERCC6L2Q5T890 1561 aa16.69■□□□□ 0.26
CNOT9-202ENST00000295701 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
CNOT9-202ENST00000295701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
CNOT9-202ENST00000295701 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
CNOT9-202ENST00000295701 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
CNOT9-202ENST00000295701 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
CNOT9-202ENST00000295701 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
CNOT9-202ENST00000295701 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
CNOT9-202ENST00000295701 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
CNOT9-202ENST00000295701 APLP2Q06481 763 aa16.63■□□□□ 0.25
CNOT9-202ENST00000295701 NUP160Q12769 1436 aa16.62■□□□□ 0.25
CNOT9-202ENST00000295701 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
CNOT9-202ENST00000295701 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
CNOT9-202ENST00000295701 DSG3P32926 999 aa16.55■□□□□ 0.24
CNOT9-202ENST00000295701 SHROOM2Q13796 1616 aa16.55■□□□□ 0.24
CNOT9-202ENST00000295701 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
CNOT9-202ENST00000295701 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
CNOT9-202ENST00000295701 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
CNOT9-202ENST00000295701 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-202ENST00000295701 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
CNOT9-202ENST00000295701 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
CNOT9-202ENST00000295701 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
CNOT9-202ENST00000295701 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
CNOT9-202ENST00000295701 IGF1RP08069 1367 aa16.38■□□□□ 0.21
CNOT9-202ENST00000295701 ABCB7O75027 752 aa16.35■□□□□ 0.21
CNOT9-202ENST00000295701 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
CNOT9-202ENST00000295701 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
CNOT9-202ENST00000295701 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
CNOT9-202ENST00000295701 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNOT9-202ENST00000295701 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
CNOT9-202ENST00000295701 ZBTB22O15209 634 aa16.29■□□□□ 0.2
CNOT9-202ENST00000295701 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
CNOT9-202ENST00000295701 TTBK1Q5TCY1 1321 aaPredicted RBP16.28■□□□□ 0.2
CNOT9-202ENST00000295701 CUL7Q14999 1698 aa16.27■□□□□ 0.2
CNOT9-202ENST00000295701 DIP2BQ9P265 1576 aa16.26■□□□□ 0.19
CNOT9-202ENST00000295701 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
CNOT9-202ENST00000295701 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
CNOT9-202ENST00000295701 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
CNOT9-202ENST00000295701 PTPRGP23470 1445 aa16.2■□□□□ 0.18
CNOT9-202ENST00000295701 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
CNOT9-202ENST00000295701 IQGAP2Q13576 1575 aa16.13■□□□□ 0.17
CNOT9-202ENST00000295701 KDM6BO15054 1643 aa16.13■□□□□ 0.17
CNOT9-202ENST00000295701 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
CNOT9-202ENST00000295701 CARMIL2Q6F5E8 1435 aa16.12■□□□□ 0.17
CNOT9-202ENST00000295701 DISP1Q96F81 1524 aa16.11■□□□□ 0.17
CNOT9-202ENST00000295701 KDM4FA0A1W2PPD8 638 aa16.11■□□□□ 0.17
CNOT9-202ENST00000295701 POLA2Q14181 598 aa16.11■□□□□ 0.17
CNOT9-202ENST00000295701 ABCC2Q92887 1545 aa16.1■□□□□ 0.17
CNOT9-202ENST00000295701 ASXL2Q76L83 1435 aa16.1■□□□□ 0.17
CNOT9-202ENST00000295701 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
CNOT9-202ENST00000295701 PPRC1Q5VV67 1664 aaKnown RBP16.07■□□□□ 0.16
CNOT9-202ENST00000295701 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
CNOT9-202ENST00000295701 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
CNOT9-202ENST00000295701 PLB1Q6P1J6 1458 aa16.04■□□□□ 0.16
CNOT9-202ENST00000295701 UGGT2Q9NYU1 1516 aa16.03■□□□□ 0.16
CNOT9-202ENST00000295701 GLI2P10070 1586 aa16.02■□□□□ 0.16
CNOT9-202ENST00000295701 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
CNOT9-202ENST00000295701 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
CNOT9-202ENST00000295701 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
CNOT9-202ENST00000295701 COL17A1Q9UMD9 1497 aaPredicted RBP15.99■□□□□ 0.15
CNOT9-202ENST00000295701 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
CNOT9-202ENST00000295701 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
CNOT9-202ENST00000295701 MAP3K4Q9Y6R4 1608 aa15.95■□□□□ 0.14
CNOT9-202ENST00000295701 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
CNOT9-202ENST00000295701 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
CNOT9-202ENST00000295701 ADGRL1O94910 1474 aa15.89■□□□□ 0.13
CNOT9-202ENST00000295701 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
CNOT9-202ENST00000295701 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
CNOT9-202ENST00000295701 ABCA8O94911 1581 aa15.87■□□□□ 0.13
CNOT9-202ENST00000295701 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
CNOT9-202ENST00000295701 TEX14Q8IWB6 1497 aa15.86■□□□□ 0.13
CNOT9-202ENST00000295701 ARID3CA6NKF2 412 aa15.86■□□□□ 0.13
CNOT9-202ENST00000295701 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
CNOT9-202ENST00000295701 CD109Q6YHK3 1445 aa15.83■□□□□ 0.12
CNOT9-202ENST00000295701 RBM42Q9BTD8 480 aaKnown RBP15.81■□□□□ 0.12
CNOT9-202ENST00000295701 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
CNOT9-202ENST00000295701 CFAP43Q8NDM7 1665 aa15.8■□□□□ 0.12
CNOT9-202ENST00000295701 MAGI3Q5TCQ9 1506 aa15.79■□□□□ 0.12
CNOT9-202ENST00000295701 ATP10BO94823 1461 aa15.77■□□□□ 0.11
CNOT9-202ENST00000295701 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
CNOT9-202ENST00000295701 RANGAP1P46060 587 aaPredicted RBP15.74■□□□□ 0.11
CNOT9-202ENST00000295701 ILDR1Q86SU0 546 aaPredicted RBP15.73■□□□□ 0.11
CNOT9-202ENST00000295701 KIF21BO75037 1637 aa15.71■□□□□ 0.11
CNOT9-202ENST00000295701 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms