RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 PHLDB1Q86UU1 1377 aa18.67■□□□□ 0.58
ATP1A1-201ENST00000295598 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
ATP1A1-201ENST00000295598 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
ATP1A1-201ENST00000295598 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
ATP1A1-201ENST00000295598 BCANQ96GW7 911 aa18.63■□□□□ 0.57
ATP1A1-201ENST00000295598 CHIC2Q9UKJ5 165 aa18.62■□□□□ 0.57
ATP1A1-201ENST00000295598 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
ATP1A1-201ENST00000295598 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
ATP1A1-201ENST00000295598 RRBP1Q9P2E9 1410 aaKnown RBP18.58■□□□□ 0.56
ATP1A1-201ENST00000295598 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
ATP1A1-201ENST00000295598 CNGB1Q14028 1251 aaPredicted RBP18.54■□□□□ 0.56
ATP1A1-201ENST00000295598 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
ATP1A1-201ENST00000295598 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
ATP1A1-201ENST00000295598 SETD5Q9C0A6 1442 aa18.49■□□□□ 0.55
ATP1A1-201ENST00000295598 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
ATP1A1-201ENST00000295598 FOXD1Q16676 465 aa18.46■□□□□ 0.55
ATP1A1-201ENST00000295598 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
ATP1A1-201ENST00000295598 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.54
ATP1A1-201ENST00000295598 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
ATP1A1-201ENST00000295598 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
ATP1A1-201ENST00000295598 SUPT16HQ9Y5B9 1047 aaKnown RBP18.43■□□□□ 0.54
ATP1A1-201ENST00000295598 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
ATP1A1-201ENST00000295598 MAPKBP1O60336 1514 aa18.4■□□□□ 0.54
ATP1A1-201ENST00000295598 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
ATP1A1-201ENST00000295598 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
ATP1A1-201ENST00000295598 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
ATP1A1-201ENST00000295598 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
ATP1A1-201ENST00000295598 FBLN2P98095 1184 aa18.35■□□□□ 0.53
ATP1A1-201ENST00000295598 PPP1R15AO75807 674 aaPredicted RBP18.33■□□□□ 0.52
ATP1A1-201ENST00000295598 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
ATP1A1-201ENST00000295598 FKBP8Q14318 412 aa18.31■□□□□ 0.52
ATP1A1-201ENST00000295598 TONSLQ96HA7 1378 aa18.31■□□□□ 0.52
ATP1A1-201ENST00000295598 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
ATP1A1-201ENST00000295598 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
ATP1A1-201ENST00000295598 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.527e-7■■■■■ 27.7
ATP1A1-201ENST00000295598 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
ATP1A1-201ENST00000295598 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
ATP1A1-201ENST00000295598 ANP32CO43423 234 aa18.25■□□□□ 0.51
ATP1A1-201ENST00000295598 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
ATP1A1-201ENST00000295598 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
ATP1A1-201ENST00000295598 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
ATP1A1-201ENST00000295598 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
ATP1A1-201ENST00000295598 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
ATP1A1-201ENST00000295598 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
ATP1A1-201ENST00000295598 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
ATP1A1-201ENST00000295598 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
ATP1A1-201ENST00000295598 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
ATP1A1-201ENST00000295598 CCDC18Q5T9S5 1454 aa18.18■□□□□ 0.5
ATP1A1-201ENST00000295598 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
ATP1A1-201ENST00000295598 FYCO1Q9BQS8 1478 aa18.15■□□□□ 0.5
ATP1A1-201ENST00000295598 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
ATP1A1-201ENST00000295598 HNRNPUQ00839 825 aaKnown RBP eCLIP18.13■□□□□ 0.49
ATP1A1-201ENST00000295598 CCDC184Q52MB2 194 aa18.12■□□□□ 0.49
ATP1A1-201ENST00000295598 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
ATP1A1-201ENST00000295598 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
ATP1A1-201ENST00000295598 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
ATP1A1-201ENST00000295598 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
ATP1A1-201ENST00000295598 SNAPC4Q5SXM2 1469 aa18.1■□□□□ 0.49
ATP1A1-201ENST00000295598 NAIPQ13075 1403 aa18.09■□□□□ 0.49
ATP1A1-201ENST00000295598 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
ATP1A1-201ENST00000295598 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
ATP1A1-201ENST00000295598 MAP3K1Q13233 1512 aa18.08■□□□□ 0.49
ATP1A1-201ENST00000295598 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.48
ATP1A1-201ENST00000295598 C11orf95C9JLR9 678 aaPredicted RBP18.08■□□□□ 0.48
ATP1A1-201ENST00000295598 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
ATP1A1-201ENST00000295598 NEFLP07196 543 aa18.06■□□□□ 0.48
ATP1A1-201ENST00000295598 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
ATP1A1-201ENST00000295598 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
ATP1A1-201ENST00000295598 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
ATP1A1-201ENST00000295598 WASHC2AQ641Q2 1341 aa18.03■□□□□ 0.48
ATP1A1-201ENST00000295598 HFM1A2PYH4 1435 aa18.01■□□□□ 0.47
ATP1A1-201ENST00000295598 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
ATP1A1-201ENST00000295598 CHMP7Q8WUX9 453 aaPredicted RBP18.01■□□□□ 0.47
ATP1A1-201ENST00000295598 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
ATP1A1-201ENST00000295598 NBPF8Q3BBV2 869 aa18■□□□□ 0.47
ATP1A1-201ENST00000295598 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
ATP1A1-201ENST00000295598 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
ATP1A1-201ENST00000295598 EIF4G2P78344 907 aaKnown RBP eCLIP17.98■□□□□ 0.47
ATP1A1-201ENST00000295598 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
ATP1A1-201ENST00000295598 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
ATP1A1-201ENST00000295598 CUL7Q14999 1698 aa17.96■□□□□ 0.47
ATP1A1-201ENST00000295598 TIMELESSQ9UNS1 1208 aa17.96■□□□□ 0.47
ATP1A1-201ENST00000295598 KDM6BO15054 1643 aa17.96■□□□□ 0.47
ATP1A1-201ENST00000295598 LRRIQ1Q96JM4 1722 aa17.96■□□□□ 0.47
ATP1A1-201ENST00000295598 PTPN23Q9H3S7 1636 aa17.96■□□□□ 0.47
ATP1A1-201ENST00000295598 CFDP1Q9UEE9 299 aaPredicted RBP17.95■□□□□ 0.46
ATP1A1-201ENST00000295598 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
ATP1A1-201ENST00000295598 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
ATP1A1-201ENST00000295598 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
ATP1A1-201ENST00000295598 MRS2Q9HD23 443 aa17.91■□□□□ 0.46
ATP1A1-201ENST00000295598 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
ATP1A1-201ENST00000295598 PRG4Q92954 1404 aaPredicted RBP17.91■□□□□ 0.46
ATP1A1-201ENST00000295598 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
ATP1A1-201ENST00000295598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.452e-7■■■■■ 55.1
ATP1A1-201ENST00000295598 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
ATP1A1-201ENST00000295598 DENND4BO75064 1496 aaPredicted RBP17.87■□□□□ 0.45
ATP1A1-201ENST00000295598 PKD2Q13563 968 aa17.86■□□□□ 0.45
ATP1A1-201ENST00000295598 SAMD9Q5K651 1589 aa17.86■□□□□ 0.45
ATP1A1-201ENST00000295598 SUPT6HQ7KZ85 1726 aaKnown RBP17.85■□□□□ 0.45
ATP1A1-201ENST00000295598 UGGT2Q9NYU1 1516 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms