RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
CDC42EP3-201ENST00000295324 C14orf37Q86TY3 774 aa24■■□□□ 1.43
CDC42EP3-201ENST00000295324 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
CDC42EP3-201ENST00000295324 DDX10Q13206 875 aaKnown RBP23.97■■□□□ 1.43
CDC42EP3-201ENST00000295324 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
CDC42EP3-201ENST00000295324 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
CDC42EP3-201ENST00000295324 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
CDC42EP3-201ENST00000295324 TMC1Q8TDI8 760 aa23.93■■□□□ 1.42
CDC42EP3-201ENST00000295324 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
CDC42EP3-201ENST00000295324 RGL3Q3MIN7 710 aa23.91■■□□□ 1.42
CDC42EP3-201ENST00000295324 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
CDC42EP3-201ENST00000295324 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
CDC42EP3-201ENST00000295324 CCNB3Q8WWL7 1395 aa23.89■■□□□ 1.42
CDC42EP3-201ENST00000295324 EIF4G2P78344 907 aaKnown RBP eCLIP23.89■■□□□ 1.41
CDC42EP3-201ENST00000295324 WDR43Q15061 677 aaKnown RBP eCLIP23.88■■□□□ 1.41
CDC42EP3-201ENST00000295324 SOGA1O94964 1423 aa23.87■■□□□ 1.41
CDC42EP3-201ENST00000295324 FAM9BQ8IZU0 186 aa23.87■■□□□ 1.41
CDC42EP3-201ENST00000295324 CARMIL2Q6F5E8 1435 aa23.86■■□□□ 1.41
CDC42EP3-201ENST00000295324 HNRNPUQ00839 825 aaKnown RBP eCLIP23.83■■□□□ 1.4
CDC42EP3-201ENST00000295324 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
CDC42EP3-201ENST00000295324 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
CDC42EP3-201ENST00000295324 A0A0G2JS52 829 aa23.8■■□□□ 1.4
CDC42EP3-201ENST00000295324 GTF3C3Q9Y5Q9 886 aa23.79■■□□□ 1.4
CDC42EP3-201ENST00000295324 CDCA8Q53HL2 280 aa23.79■■□□□ 1.4
CDC42EP3-201ENST00000295324 ZBTB7CA1YPR0 619 aa23.78■■□□□ 1.4
CDC42EP3-201ENST00000295324 PLEKHG5O94827 1062 aa23.77■■□□□ 1.4
CDC42EP3-201ENST00000295324 HAP1P54257 671 aaPredicted RBP23.76■■□□□ 1.39
CDC42EP3-201ENST00000295324 SALL2Q9Y467 1007 aaPredicted RBP23.76■■□□□ 1.39
CDC42EP3-201ENST00000295324 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
CDC42EP3-201ENST00000295324 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
CDC42EP3-201ENST00000295324 KANK1Q14678 1352 aa23.71■■□□□ 1.39
CDC42EP3-201ENST00000295324 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.7■■□□□ 1.38
CDC42EP3-201ENST00000295324 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
CDC42EP3-201ENST00000295324 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
CDC42EP3-201ENST00000295324 POGKQ9P215 609 aa23.66■■□□□ 1.38
CDC42EP3-201ENST00000295324 MLECQ14165 292 aa23.66■■□□□ 1.38
CDC42EP3-201ENST00000295324 ATAD2BQ9ULI0 1458 aa23.66■■□□□ 1.38
CDC42EP3-201ENST00000295324 CARD11Q9BXL7 1154 aa23.65■■□□□ 1.38
CDC42EP3-201ENST00000295324 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.37
CDC42EP3-201ENST00000295324 CFAP53Q96M91 514 aa23.62■■□□□ 1.37
CDC42EP3-201ENST00000295324 EFCAB2Q5VUJ9 269 aa23.6■■□□□ 1.37
CDC42EP3-201ENST00000295324 KNSTRNQ9Y448 316 aa23.59■■□□□ 1.37
CDC42EP3-201ENST00000295324 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
CDC42EP3-201ENST00000295324 FMN1Q68DA7 1419 aa23.56■■□□□ 1.36
CDC42EP3-201ENST00000295324 GGT6Q6P531 493 aa23.55■■□□□ 1.36
CDC42EP3-201ENST00000295324 LMOD2Q6P5Q4 547 aa23.53■■□□□ 1.36
CDC42EP3-201ENST00000295324 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
CDC42EP3-201ENST00000295324 UPF2Q9HAU5 1272 aaKnown RBP23.52■■□□□ 1.36
CDC42EP3-201ENST00000295324 WIZO95785 1651 aa23.51■■□□□ 1.35
CDC42EP3-201ENST00000295324 FKBP8Q14318 412 aa23.5■■□□□ 1.35
CDC42EP3-201ENST00000295324 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
CDC42EP3-201ENST00000295324 JPH4Q96JJ6 628 aa23.48■■□□□ 1.35
CDC42EP3-201ENST00000295324 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
CDC42EP3-201ENST00000295324 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
CDC42EP3-201ENST00000295324 MYH16Q9H6N6 1097 aa23.45■■□□□ 1.34
CDC42EP3-201ENST00000295324 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
CDC42EP3-201ENST00000295324 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
CDC42EP3-201ENST00000295324 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
CDC42EP3-201ENST00000295324 HSP90AA1P07900 732 aaKnown RBP23.43■■□□□ 1.34
CDC42EP3-201ENST00000295324 DCAF11Q8TEB1 546 aa23.43■■□□□ 1.34
CDC42EP3-201ENST00000295324 NUDCQ9Y266 331 aa23.42■■□□□ 1.34
CDC42EP3-201ENST00000295324 SIN3AQ96ST3 1273 aa23.42■■□□□ 1.34
CDC42EP3-201ENST00000295324 CCDC136Q96JN2 1154 aa23.41■■□□□ 1.34
CDC42EP3-201ENST00000295324 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
CDC42EP3-201ENST00000295324 TMF1P82094 1093 aa23.35■■□□□ 1.33
CDC42EP3-201ENST00000295324 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
CDC42EP3-201ENST00000295324 MAPK8IP3Q9UPT6 1336 aa23.35■■□□□ 1.33
CDC42EP3-201ENST00000295324 ANKRD30AQ9BXX3 1397 aa23.34■■□□□ 1.33
CDC42EP3-201ENST00000295324 PKD2Q13563 968 aa23.34■■□□□ 1.33
CDC42EP3-201ENST00000295324 TIMELESSQ9UNS1 1208 aa23.33■■□□□ 1.33
CDC42EP3-201ENST00000295324 ARXQ96QS3 562 aa23.33■■□□□ 1.33
CDC42EP3-201ENST00000295324 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
CDC42EP3-201ENST00000295324 SRPK2P78362 688 aaKnown RBP23.3■■□□□ 1.32
CDC42EP3-201ENST00000295324 SETD5Q9C0A6 1442 aa23.3■■□□□ 1.32
CDC42EP3-201ENST00000295324 MIER1Q8N108 512 aa23.29■■□□□ 1.32
CDC42EP3-201ENST00000295324 KIF3BO15066 747 aa23.29■■□□□ 1.32
CDC42EP3-201ENST00000295324 SPAG9O60271 1321 aaKnown RBP23.28■■□□□ 1.32
CDC42EP3-201ENST00000295324 NUP155O75694 1391 aa23.26■■□□□ 1.31
CDC42EP3-201ENST00000295324 FHOD3Q2V2M9 1422 aa23.26■■□□□ 1.31
CDC42EP3-201ENST00000295324 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
CDC42EP3-201ENST00000295324 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
CDC42EP3-201ENST00000295324 PTPRGP23470 1445 aa23.24■■□□□ 1.31
CDC42EP3-201ENST00000295324 PNNQ9H307 717 aaKnown RBP23.23■■□□□ 1.31
CDC42EP3-201ENST00000295324 TNNT2P45379 298 aaPredicted RBP23.23■■□□□ 1.31
CDC42EP3-201ENST00000295324 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDC42EP3-201ENST00000295324 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
CDC42EP3-201ENST00000295324 NEUROD2Q15784 382 aa23.2■■□□□ 1.31
CDC42EP3-201ENST00000295324 STK26Q9P289 416 aa23.2■■□□□ 1.31
CDC42EP3-201ENST00000295324 U2SURPO15042 1029 aaKnown RBP23.19■■□□□ 1.3
CDC42EP3-201ENST00000295324 WASHC2CQ9Y4E1 1318 aa23.18■■□□□ 1.3
CDC42EP3-201ENST00000295324 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
CDC42EP3-201ENST00000295324 LAS1LQ9Y4W2 734 aaKnown RBP23.17■■□□□ 1.3
CDC42EP3-201ENST00000295324 EID1Q9Y6B2 187 aa23.17■■□□□ 1.3
CDC42EP3-201ENST00000295324 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
CDC42EP3-201ENST00000295324 MPHOSPH9Q99550 1183 aa23.15■■□□□ 1.3
CDC42EP3-201ENST00000295324 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.3
CDC42EP3-201ENST00000295324 NPHP1O15259 732 aa23.13■■□□□ 1.29
CDC42EP3-201ENST00000295324 SOX12O15370 315 aa23.11■■□□□ 1.29
CDC42EP3-201ENST00000295324 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
CDC42EP3-201ENST00000295324 FTSJ3Q8IY81 847 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms