RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 SUPT16HQ9Y5B9 1047 aaKnown RBP27.62■■■□□ 2.01
LSM12-201ENST00000293406 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
LSM12-201ENST00000293406 PHLDB1Q86UU1 1377 aa27.6■■■□□ 2.01
LSM12-201ENST00000293406 FAM50AQ14320 339 aaKnown RBP27.54■■■□□ 2
LSM12-201ENST00000293406 CFAP43Q8NDM7 1665 aa27.52■■■□□ 2
LSM12-201ENST00000293406 PCF11O94913 1555 aaKnown RBP27.5■■□□□ 1.99
LSM12-201ENST00000293406 P3H3Q8IVL6 736 aa27.47■■□□□ 1.99
LSM12-201ENST00000293406 SIN3AQ96ST3 1273 aa27.45■■□□□ 1.98
LSM12-201ENST00000293406 ATP1B4Q9UN42 357 aaPredicted RBP27.45■■□□□ 1.98
LSM12-201ENST00000293406 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
LSM12-201ENST00000293406 KCNH8Q96L42 1107 aa27.43■■□□□ 1.98
LSM12-201ENST00000293406 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
LSM12-201ENST00000293406 TIMELESSQ9UNS1 1208 aa27.4■■□□□ 1.98
LSM12-201ENST00000293406 FHOD3Q2V2M9 1422 aa27.39■■□□□ 1.98
LSM12-201ENST00000293406 FYCO1Q9BQS8 1478 aa27.39■■□□□ 1.98
LSM12-201ENST00000293406 DDX10Q13206 875 aaKnown RBP27.36■■□□□ 1.97
LSM12-201ENST00000293406 EFCAB5A4FU69 1503 aa27.36■■□□□ 1.97
LSM12-201ENST00000293406 CASKIN1Q8WXD9 1431 aa27.34■■□□□ 1.97
LSM12-201ENST00000293406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.97
LSM12-201ENST00000293406 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
LSM12-201ENST00000293406 DNMBPQ6XZF7 1577 aa27.32■■□□□ 1.96
LSM12-201ENST00000293406 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.963e-7■■■■□ 24
LSM12-201ENST00000293406 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
LSM12-201ENST00000293406 PPP1R15AO75807 674 aaPredicted RBP27.28■■□□□ 1.96
LSM12-201ENST00000293406 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
LSM12-201ENST00000293406 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
LSM12-201ENST00000293406 CUL7Q14999 1698 aa27.25■■□□□ 1.95
LSM12-201ENST00000293406 TOPBP1Q92547 1522 aa27.25■■□□□ 1.95
LSM12-201ENST00000293406 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
LSM12-201ENST00000293406 FMN1Q68DA7 1419 aa27.22■■□□□ 1.95
LSM12-201ENST00000293406 FGD6Q6ZV73 1430 aa27.22■■□□□ 1.95
LSM12-201ENST00000293406 TSHZ2Q9NRE2 1034 aa27.22■■□□□ 1.95
LSM12-201ENST00000293406 HIRIP3Q9BW71 556 aaPredicted RBP27.17■■□□□ 1.94
LSM12-201ENST00000293406 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
LSM12-201ENST00000293406 CCER2I3L3R5 266 aa27.14■■□□□ 1.94
LSM12-201ENST00000293406 MTUS2Q5JR59 1369 aa27.14■■□□□ 1.94
LSM12-201ENST00000293406 TONSLQ96HA7 1378 aa27.14■■□□□ 1.94
LSM12-201ENST00000293406 CCDC18Q5T9S5 1454 aa27.14■■□□□ 1.93
LSM12-201ENST00000293406 ANP32CO43423 234 aa27.13■■□□□ 1.93
LSM12-201ENST00000293406 HFM1A2PYH4 1435 aa27.1■■□□□ 1.93
LSM12-201ENST00000293406 FKBP8Q14318 412 aa27.1■■□□□ 1.93
LSM12-201ENST00000293406 UACAQ9BZF9 1416 aa27.09■■□□□ 1.93
LSM12-201ENST00000293406 NESP48681 1621 aa27.09■■□□□ 1.93
LSM12-201ENST00000293406 BCANQ96GW7 911 aa27.07■■□□□ 1.92
LSM12-201ENST00000293406 PTPRKQ15262 1439 aa27.07■■□□□ 1.92
LSM12-201ENST00000293406 PTPN23Q9H3S7 1636 aa27.05■■□□□ 1.92
LSM12-201ENST00000293406 SAMD9Q5K651 1589 aa27.03■■□□□ 1.92
LSM12-201ENST00000293406 NCOA2Q15596 1464 aa27.01■■□□□ 1.92
LSM12-201ENST00000293406 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.91
LSM12-201ENST00000293406 NAIPQ13075 1403 aa27■■□□□ 1.91
LSM12-201ENST00000293406 NEFLP07196 543 aa27■■□□□ 1.91
LSM12-201ENST00000293406 TRIM52Q96A61 297 aa26.99■■□□□ 1.91
LSM12-201ENST00000293406 GRIN2BQ13224 1484 aa26.98■■□□□ 1.91
LSM12-201ENST00000293406 LRRIQ1Q96JM4 1722 aa26.98■■□□□ 1.91
LSM12-201ENST00000293406 URB2Q14146 1524 aaKnown RBP26.98■■□□□ 1.91
LSM12-201ENST00000293406 TDRD9Q8NDG6 1382 aaKnown RBP26.96■■□□□ 1.91
LSM12-201ENST00000293406 THOC2Q8NI27 1593 aaKnown RBP26.96■■□□□ 1.91
LSM12-201ENST00000293406 ABCA5Q8WWZ7 1642 aa26.95■■□□□ 1.91
LSM12-201ENST00000293406 SUPT6HQ7KZ85 1726 aaKnown RBP26.95■■□□□ 1.9
LSM12-201ENST00000293406 EHBP1L1Q8N3D4 1523 aa26.94■■□□□ 1.9
LSM12-201ENST00000293406 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
LSM12-201ENST00000293406 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
LSM12-201ENST00000293406 UGGT2Q9NYU1 1516 aa26.87■■□□□ 1.89
LSM12-201ENST00000293406 KDM5BQ9UGL1 1544 aa26.86■■□□□ 1.89
LSM12-201ENST00000293406 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
LSM12-201ENST00000293406 ANP32EQ9BTT0 268 aa26.82■■□□□ 1.88
LSM12-201ENST00000293406 KIF21AQ7Z4S6 1674 aa26.81■■□□□ 1.88
LSM12-201ENST00000293406 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
LSM12-201ENST00000293406 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
LSM12-201ENST00000293406 TCOF1Q13428 1488 aaKnown RBP26.78■■□□□ 1.88
LSM12-201ENST00000293406 CHIC2Q9UKJ5 165 aa26.76■■□□□ 1.87
LSM12-201ENST00000293406 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
LSM12-201ENST00000293406 GCC2Q8IWJ2 1684 aa26.75■■□□□ 1.87
LSM12-201ENST00000293406 HECW1Q76N89 1606 aa26.74■■□□□ 1.87
LSM12-201ENST00000293406 HSPA5P11021 654 aaKnown RBP26.72■■□□□ 1.87
LSM12-201ENST00000293406 AKNAQ7Z591 1439 aa26.72■■□□□ 1.87
LSM12-201ENST00000293406 WASHC2AQ641Q2 1341 aa26.71■■□□□ 1.87
LSM12-201ENST00000293406 DENND4BO75064 1496 aaPredicted RBP26.71■■□□□ 1.87
LSM12-201ENST00000293406 HNRNPUQ00839 825 aaKnown RBP eCLIP26.71■■□□□ 1.87
LSM12-201ENST00000293406 RBM19Q9Y4C8 960 aaKnown RBP26.68■■□□□ 1.86
LSM12-201ENST00000293406 EIF4G2P78344 907 aaKnown RBP eCLIP26.67■■□□□ 1.86
LSM12-201ENST00000293406 EPRSP07814 1512 aaKnown RBP26.66■■□□□ 1.86
LSM12-201ENST00000293406 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
LSM12-201ENST00000293406 MIA2Q96PC5 1412 aa26.65■■□□□ 1.86
LSM12-201ENST00000293406 KDM6BO15054 1643 aa26.65■■□□□ 1.86
LSM12-201ENST00000293406 MPHOSPH9Q99550 1183 aa26.64■■□□□ 1.86
LSM12-201ENST00000293406 IQGAP2Q13576 1575 aa26.62■■□□□ 1.85
LSM12-201ENST00000293406 CDK13Q14004 1512 aaKnown RBP26.59■■□□□ 1.85
LSM12-201ENST00000293406 L3MBTL2Q969R5 705 aa26.58■■□□□ 1.85
LSM12-201ENST00000293406 CNTLNQ9NXG0 1405 aa26.58■■□□□ 1.85
LSM12-201ENST00000293406 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
LSM12-201ENST00000293406 WDR62O43379 1518 aa26.55■■□□□ 1.84
LSM12-201ENST00000293406 FOXD1Q16676 465 aa26.53■■□□□ 1.84
LSM12-201ENST00000293406 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
LSM12-201ENST00000293406 ADAMTS12P58397 1594 aa26.51■■□□□ 1.83
LSM12-201ENST00000293406 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
LSM12-201ENST00000293406 CCDC7Q96M83 1385 aa26.49■■□□□ 1.83
LSM12-201ENST00000293406 IRX6P78412 446 aaPredicted RBP26.49■■□□□ 1.83
LSM12-201ENST00000293406 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
LSM12-201ENST00000293406 C11orf95C9JLR9 678 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms