RNA–Protein interactions for RNA: ENST00000292303.4

CCR5-201, Transcript of C-C motif chemokine receptor 5 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR5, Length 3,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR5-201ENST00000292303 KANK4Q5T7N3 995 aaPredicted RBP8.6□□□□□ -1.03
CCR5-201ENST00000292303 ERICH3Q5RHP9 1530 aa8.58□□□□□ -1.04
CCR5-201ENST00000292303 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
CCR5-201ENST00000292303 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
CCR5-201ENST00000292303 THOC2Q8NI27 1593 aaKnown RBP8.56□□□□□ -1.04
CCR5-201ENST00000292303 KIF27Q86VH2 1401 aa8.56□□□□□ -1.04
CCR5-201ENST00000292303 ANP32EQ9BTT0 268 aa8.56□□□□□ -1.04
CCR5-201ENST00000292303 CNGB1Q14028 1251 aaPredicted RBP8.55□□□□□ -1.04
CCR5-201ENST00000292303 ERICH6Q7L0X2 663 aa8.54□□□□□ -1.04
CCR5-201ENST00000292303 ARHGAP35Q9NRY4 1499 aa8.53□□□□□ -1.04
CCR5-201ENST00000292303 MAPK8IP2Q13387 824 aaPredicted RBP8.52□□□□□ -1.05
CCR5-201ENST00000292303 IGF1RP08069 1367 aa8.52□□□□□ -1.05
CCR5-201ENST00000292303 CADPSQ9ULU8 1353 aa8.51□□□□□ -1.05
CCR5-201ENST00000292303 WDR97A6NE52 1622 aa8.5□□□□□ -1.05
CCR5-201ENST00000292303 MIER1Q8N108 512 aa8.49□□□□□ -1.05
CCR5-201ENST00000292303 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
CCR5-201ENST00000292303 DHX57Q6P158 1386 aaKnown RBP8.49□□□□□ -1.05
CCR5-201ENST00000292303 WDR62O43379 1518 aa8.47□□□□□ -1.05
CCR5-201ENST00000292303 NCBP3Q53F19 620 aaKnown RBP8.47□□□□□ -1.05
CCR5-201ENST00000292303 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
CCR5-201ENST00000292303 RRBP1Q9P2E9 1410 aaKnown RBP8.46□□□□□ -1.05
CCR5-201ENST00000292303 CARMIL1Q5VZK9 1371 aa8.46□□□□□ -1.06
CCR5-201ENST00000292303 FAM50AQ14320 339 aaKnown RBP8.45□□□□□ -1.06
CCR5-201ENST00000292303 NESP48681 1621 aa8.44□□□□□ -1.06
CCR5-201ENST00000292303 ANO8Q9HCE9 1232 aaPredicted RBP8.44□□□□□ -1.06
CCR5-201ENST00000292303 RAD54L2Q9Y4B4 1467 aa8.44□□□□□ -1.06
CCR5-201ENST00000292303 BCANQ96GW7 911 aa8.44□□□□□ -1.06
CCR5-201ENST00000292303 FANCD2Q9BXW9 1451 aa8.43□□□□□ -1.06
CCR5-201ENST00000292303 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
CCR5-201ENST00000292303 CCDC136Q96JN2 1154 aa8.43□□□□□ -1.06
CCR5-201ENST00000292303 PDS5BQ9NTI5 1447 aa8.42□□□□□ -1.06
CCR5-201ENST00000292303 TIAM1Q13009 1591 aa8.41□□□□□ -1.06
CCR5-201ENST00000292303 KIF21AQ7Z4S6 1674 aa8.4□□□□□ -1.07
CCR5-201ENST00000292303 PHLDB1Q86UU1 1377 aa8.39□□□□□ -1.07
CCR5-201ENST00000292303 POLA1P09884 1462 aaPredicted RBP8.39□□□□□ -1.07
CCR5-201ENST00000292303 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
CCR5-201ENST00000292303 TOPBP1Q92547 1522 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 MRC2Q9UBG0 1479 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 LRRC9Q6ZRR7 1453 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
CCR5-201ENST00000292303 PCF11O94913 1555 aaKnown RBP8.37□□□□□ -1.07
CCR5-201ENST00000292303 DNMBPQ6XZF7 1577 aa8.37□□□□□ -1.07
CCR5-201ENST00000292303 ERCC6Q03468 1493 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 ABCA10Q8WWZ4 1543 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 MAPKBP1O60336 1514 aa8.35□□□□□ -1.07
CCR5-201ENST00000292303 MAP3K1Q13233 1512 aa8.35□□□□□ -1.07
CCR5-201ENST00000292303 CNKSR2Q8WXI2 1034 aa8.34□□□□□ -1.07
CCR5-201ENST00000292303 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.07
CCR5-201ENST00000292303 POLR3GLQ9BT43 218 aa8.34□□□□□ -1.07
CCR5-201ENST00000292303 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
CCR5-201ENST00000292303 CFAP43Q8NDM7 1665 aa8.33□□□□□ -1.08
CCR5-201ENST00000292303 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
CCR5-201ENST00000292303 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
CCR5-201ENST00000292303 TDRD9Q8NDG6 1382 aaKnown RBP8.33□□□□□ -1.08
CCR5-201ENST00000292303 FHAD1B1AJZ9 1412 aa8.32□□□□□ -1.08
CCR5-201ENST00000292303 SETD5Q9C0A6 1442 aa8.32□□□□□ -1.08
CCR5-201ENST00000292303 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
CCR5-201ENST00000292303 CTTNBP2Q8WZ74 1663 aa8.31□□□□□ -1.08
CCR5-201ENST00000292303 RTN4Q9NQC3 1192 aaKnown RBP8.31□□□□□ -1.08
CCR5-201ENST00000292303 FBLN2P98095 1184 aa8.31□□□□□ -1.08
CCR5-201ENST00000292303 LRRIQ1Q96JM4 1722 aa8.3□□□□□ -1.08
CCR5-201ENST00000292303 CHIC2Q9UKJ5 165 aa8.3□□□□□ -1.08
CCR5-201ENST00000292303 CUL7Q14999 1698 aa8.29□□□□□ -1.08
CCR5-201ENST00000292303 CASKIN1Q8WXD9 1431 aa8.29□□□□□ -1.08
CCR5-201ENST00000292303 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
CCR5-201ENST00000292303 FYCO1Q9BQS8 1478 aa8.28□□□□□ -1.08
CCR5-201ENST00000292303 SNAPC4Q5SXM2 1469 aa8.27□□□□□ -1.08
CCR5-201ENST00000292303 EFCAB5A4FU69 1503 aa8.27□□□□□ -1.09
CCR5-201ENST00000292303 ABCA5Q8WWZ7 1642 aa8.27□□□□□ -1.09
CCR5-201ENST00000292303 SALL2Q9Y467 1007 aaPredicted RBP8.27□□□□□ -1.09
CCR5-201ENST00000292303 SLC4A1APQ9BWU0 796 aaKnown RBP8.27□□□□□ -1.09
CCR5-201ENST00000292303 SUPT16HQ9Y5B9 1047 aaKnown RBP8.26□□□□□ -1.09
CCR5-201ENST00000292303 PTPRKQ15262 1439 aa8.26□□□□□ -1.09
CCR5-201ENST00000292303 DDX10Q13206 875 aaKnown RBP8.26□□□□□ -1.09
CCR5-201ENST00000292303 GAPVD1Q14C86 1478 aa8.26□□□□□ -1.09
CCR5-201ENST00000292303 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCR5-201ENST00000292303 DCAF8L1A6NGE4 600 aa8.25□□□□□ -1.09
CCR5-201ENST00000292303 SAMD9Q5K651 1589 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 ZNF326Q5BKZ1 582 aaKnown RBP8.24□□□□□ -1.09
CCR5-201ENST00000292303 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 FGD6Q6ZV73 1430 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 EIF5BO60841 1220 aaKnown RBP8.23□□□□□ -1.09
CCR5-201ENST00000292303 MTUS2Q5JR59 1369 aa8.22□□□□□ -1.09
CCR5-201ENST00000292303 TARBP1Q13395 1621 aaKnown RBP8.22□□□□□ -1.09
CCR5-201ENST00000292303 GRIN2BQ13224 1484 aa8.22□□□□□ -1.09
CCR5-201ENST00000292303 IFT140Q96RY7 1462 aa8.22□□□□□ -1.09
CCR5-201ENST00000292303 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.09
CCR5-201ENST00000292303 NCOA2Q15596 1464 aa8.21□□□□□ -1.1
CCR5-201ENST00000292303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCR5-201ENST00000292303 PPP1R15AO75807 674 aaPredicted RBP8.2□□□□□ -1.1
CCR5-201ENST00000292303 RRP7BPQ9NSQ0 103 aa8.2□□□□□ -1.1
CCR5-201ENST00000292303 ZNF777Q9ULD5 760 aaPredicted RBP8.19□□□□□ -1.1
CCR5-201ENST00000292303 CCDC18Q5T9S5 1454 aa8.19□□□□□ -1.1
CCR5-201ENST00000292303 NBR1Q14596 966 aa8.18□□□□□ -1.1
CCR5-201ENST00000292303 DMRT2Q9Y5R5 561 aa8.18□□□□□ -1.1
CCR5-201ENST00000292303 PTPN23Q9H3S7 1636 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms