RNA–Protein interactions for RNA: ENST00000290418.4

CCDC142-201, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CCDC142, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-201ENST00000290418 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
CCDC142-201ENST00000290418 FAM50AQ14320 339 aaKnown RBP25.32■■□□□ 1.64
CCDC142-201ENST00000290418 ZNF316A6NFI3 1004 aaPredicted RBP25.31■■□□□ 1.64
CCDC142-201ENST00000290418 CCNB3Q8WWL7 1395 aa25.31■■□□□ 1.64
CCDC142-201ENST00000290418 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
CCDC142-201ENST00000290418 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
CCDC142-201ENST00000290418 PDS5BQ9NTI5 1447 aa25.27■■□□□ 1.64
CCDC142-201ENST00000290418 DHX57Q6P158 1386 aaKnown RBP25.26■■□□□ 1.63
CCDC142-201ENST00000290418 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
CCDC142-201ENST00000290418 ARID3CA6NKF2 412 aa25.24■■□□□ 1.63
CCDC142-201ENST00000290418 RRBP1Q9P2E9 1410 aaKnown RBP25.24■■□□□ 1.63
CCDC142-201ENST00000290418 PCF11O94913 1555 aaKnown RBP25.23■■□□□ 1.63
CCDC142-201ENST00000290418 TIAM1Q13009 1591 aa25.22■■□□□ 1.63
CCDC142-201ENST00000290418 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
CCDC142-201ENST00000290418 LRRC9Q6ZRR7 1453 aa25.18■■□□□ 1.62
CCDC142-201ENST00000290418 AQRO60306 1485 aaKnown RBP eCLIP25.17■■□□□ 1.625e-7■■■□□ 17.7
CCDC142-201ENST00000290418 MIER1Q8N108 512 aa25.16■■□□□ 1.62
CCDC142-201ENST00000290418 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
CCDC142-201ENST00000290418 WDR97A6NE52 1622 aa25.1■■□□□ 1.61
CCDC142-201ENST00000290418 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
CCDC142-201ENST00000290418 CUL7Q14999 1698 aa25.08■■□□□ 1.61
CCDC142-201ENST00000290418 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
CCDC142-201ENST00000290418 CTTNBP2Q8WZ74 1663 aa25.04■■□□□ 1.6
CCDC142-201ENST00000290418 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
CCDC142-201ENST00000290418 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
CCDC142-201ENST00000290418 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
CCDC142-201ENST00000290418 CASKIN1Q8WXD9 1431 aa24.98■■□□□ 1.59
CCDC142-201ENST00000290418 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
CCDC142-201ENST00000290418 FYCO1Q9BQS8 1478 aa24.95■■□□□ 1.58
CCDC142-201ENST00000290418 CFAP43Q8NDM7 1665 aa24.95■■□□□ 1.58
CCDC142-201ENST00000290418 EFCAB5A4FU69 1503 aa24.94■■□□□ 1.58
CCDC142-201ENST00000290418 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
CCDC142-201ENST00000290418 FMN1Q68DA7 1419 aa24.92■■□□□ 1.58
CCDC142-201ENST00000290418 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
CCDC142-201ENST00000290418 SETD5Q9C0A6 1442 aa24.9■■□□□ 1.58
CCDC142-201ENST00000290418 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
CCDC142-201ENST00000290418 FBLN2P98095 1184 aa24.9■■□□□ 1.58
CCDC142-201ENST00000290418 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
CCDC142-201ENST00000290418 CHIC2Q9UKJ5 165 aa24.85■■□□□ 1.57
CCDC142-201ENST00000290418 MAPKBP1O60336 1514 aa24.84■■□□□ 1.57
CCDC142-201ENST00000290418 CLSPNQ9HAW4 1339 aa24.84■■□□□ 1.57
CCDC142-201ENST00000290418 HIRIP3Q9BW71 556 aaPredicted RBP24.83■■□□□ 1.57
CCDC142-201ENST00000290418 PBRM1Q86U86 1689 aa24.83■■□□□ 1.57
CCDC142-201ENST00000290418 SAMD9Q5K651 1589 aa24.82■■□□□ 1.56
CCDC142-201ENST00000290418 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
CCDC142-201ENST00000290418 FGD6Q6ZV73 1430 aa24.8■■□□□ 1.56
CCDC142-201ENST00000290418 PTPRKQ15262 1439 aa24.79■■□□□ 1.56
CCDC142-201ENST00000290418 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
CCDC142-201ENST00000290418 NCOA2Q15596 1464 aa24.77■■□□□ 1.56
CCDC142-201ENST00000290418 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
CCDC142-201ENST00000290418 MYT1Q01538 1121 aa24.76■■□□□ 1.55
CCDC142-201ENST00000290418 RRP7BPQ9NSQ0 103 aa24.76■■□□□ 1.55
CCDC142-201ENST00000290418 CDK13Q14004 1512 aaKnown RBP24.75■■□□□ 1.55
CCDC142-201ENST00000290418 ADAMTS12P58397 1594 aa24.74■■□□□ 1.55
CCDC142-201ENST00000290418 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
CCDC142-201ENST00000290418 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
CCDC142-201ENST00000290418 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
CCDC142-201ENST00000290418 MYOM3Q5VTT5 1437 aa24.65■■□□□ 1.54
CCDC142-201ENST00000290418 WDR62O43379 1518 aa24.63■■□□□ 1.53
CCDC142-201ENST00000290418 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
CCDC142-201ENST00000290418 EPRSP07814 1512 aaKnown RBP24.61■■□□□ 1.53
CCDC142-201ENST00000290418 CCDC18Q5T9S5 1454 aa24.6■■□□□ 1.53
CCDC142-201ENST00000290418 ZNF644Q9H582 1327 aaPredicted RBP24.59■■□□□ 1.53
CCDC142-201ENST00000290418 KCNH8Q96L42 1107 aa24.58■■□□□ 1.53
CCDC142-201ENST00000290418 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
CCDC142-201ENST00000290418 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
CCDC142-201ENST00000290418 SUPT6HQ7KZ85 1726 aaKnown RBP24.57■■□□□ 1.52
CCDC142-201ENST00000290418 FOXD1Q16676 465 aa24.57■■□□□ 1.52
CCDC142-201ENST00000290418 EHBP1L1Q8N3D4 1523 aa24.55■■□□□ 1.52
CCDC142-201ENST00000290418 DDX10Q13206 875 aaKnown RBP24.55■■□□□ 1.52
CCDC142-201ENST00000290418 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
CCDC142-201ENST00000290418 NAIPQ13075 1403 aa24.53■■□□□ 1.52
CCDC142-201ENST00000290418 DISP1Q96F81 1524 aa24.53■■□□□ 1.52
CCDC142-201ENST00000290418 UGGT2Q9NYU1 1516 aa24.53■■□□□ 1.52
CCDC142-201ENST00000290418 PTPN23Q9H3S7 1636 aa24.53■■□□□ 1.52
CCDC142-201ENST00000290418 HECW1Q76N89 1606 aa24.51■■□□□ 1.51
CCDC142-201ENST00000290418 SUPT16HQ9Y5B9 1047 aaKnown RBP24.5■■□□□ 1.51
CCDC142-201ENST00000290418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCDC142-201ENST00000290418 ZNF777Q9ULD5 760 aaPredicted RBP24.49■■□□□ 1.51
CCDC142-201ENST00000290418 HFM1A2PYH4 1435 aa24.49■■□□□ 1.51
CCDC142-201ENST00000290418 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
CCDC142-201ENST00000290418 PLB1Q6P1J6 1458 aa24.46■■□□□ 1.51
CCDC142-201ENST00000290418 PPP1R15AO75807 674 aaPredicted RBP24.45■■□□□ 1.51
CCDC142-201ENST00000290418 KIAA0556O60303 1618 aa24.44■■□□□ 1.5
CCDC142-201ENST00000290418 TONSLQ96HA7 1378 aa24.44■■□□□ 1.5
CCDC142-201ENST00000290418 KDM6BO15054 1643 aa24.43■■□□□ 1.5
CCDC142-201ENST00000290418 NUP153P49790 1475 aaKnown RBP24.43■■□□□ 1.5
CCDC142-201ENST00000290418 PRG4Q92954 1404 aaPredicted RBP24.43■■□□□ 1.5
CCDC142-201ENST00000290418 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
CCDC142-201ENST00000290418 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
CCDC142-201ENST00000290418 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
CCDC142-201ENST00000290418 UACAQ9BZF9 1416 aa24.4■■□□□ 1.5
CCDC142-201ENST00000290418 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
CCDC142-201ENST00000290418 BCANQ96GW7 911 aa24.33■■□□□ 1.49
CCDC142-201ENST00000290418 RAPGEF6Q8TEU7 1601 aa24.31■■□□□ 1.48
CCDC142-201ENST00000290418 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
CCDC142-201ENST00000290418 MPHOSPH9Q99550 1183 aa24.3■■□□□ 1.48
CCDC142-201ENST00000290418 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
CCDC142-201ENST00000290418 CDK11AQ9UQ88 783 aaPredicted RBP24.29■■□□□ 1.48
CCDC142-201ENST00000290418 DENND4BO75064 1496 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms